RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 SF3A1Q15459 793 aaKnown RBP3.79□□□□□ -1.8
CBX3P9-201ENST00000402326 CWF19L2Q2TBE0 894 aaKnown RBP3.79□□□□□ -1.8
CBX3P9-201ENST00000402326 UVSSAQ2YD98 709 aa3.79□□□□□ -1.8
CBX3P9-201ENST00000402326 WIPI1Q5MNZ9 446 aaPredicted RBP3.79□□□□□ -1.8
CBX3P9-201ENST00000402326 LRFN4Q6PJG9 635 aa3.79□□□□□ -1.8
CBX3P9-201ENST00000402326 C12orf40Q86WS4 652 aa3.79□□□□□ -1.8
CBX3P9-201ENST00000402326 SLC43A3Q8NBI5 491 aa3.79□□□□□ -1.8
CBX3P9-201ENST00000402326 C2CD4AQ8NCU7 369 aaPredicted RBP3.79□□□□□ -1.8
CBX3P9-201ENST00000402326 DHX38Q92620 1227 aaKnown RBP3.79□□□□□ -1.8
CBX3P9-201ENST00000402326 PLPPR2Q96GM1 343 aa3.79□□□□□ -1.8
CBX3P9-201ENST00000402326 FAM46AQ96IP4 442 aaKnown RBP3.79□□□□□ -1.8
CBX3P9-201ENST00000402326 EAF1Q96JC9 268 aaPredicted RBP3.79□□□□□ -1.8
CBX3P9-201ENST00000402326 SPATA32Q96LK8 384 aa3.79□□□□□ -1.8
CBX3P9-201ENST00000402326 FANCD2OSQ96PS1 177 aa3.79□□□□□ -1.8
CBX3P9-201ENST00000402326 UBL7Q96S82 380 aaPredicted RBP3.79□□□□□ -1.8
CBX3P9-201ENST00000402326 PICK1Q9NRD5 415 aa3.79□□□□□ -1.8
CBX3P9-201ENST00000402326 UBP1Q9NZI7 540 aa3.79□□□□□ -1.8
CBX3P9-201ENST00000402326 CSADQ9Y600 493 aa3.79□□□□□ -1.8
CBX3P9-201ENST00000402326 GFRA2O00451 464 aa3.78□□□□□ -1.8
CBX3P9-201ENST00000402326 TLR3O15455 904 aaKnown RBP3.78□□□□□ -1.8
CBX3P9-201ENST00000402326 ASPAP45381 313 aa3.78□□□□□ -1.8
CBX3P9-201ENST00000402326 PREPP48147 710 aa3.78□□□□□ -1.8
CBX3P9-201ENST00000402326 GJA8P48165 433 aa3.78□□□□□ -1.8
CBX3P9-201ENST00000402326 CDK8P49336 464 aa3.78□□□□□ -1.8
CBX3P9-201ENST00000402326 CYFIP1Q7L576 1253 aa3.78□□□□□ -1.8
CBX3P9-201ENST00000402326 REC114Q7Z4M0 266 aa3.78□□□□□ -1.8
CBX3P9-201ENST00000402326 VPS37DQ86XT2 251 aa3.78□□□□□ -1.8
CBX3P9-201ENST00000402326 RNF214Q8ND24 703 aa3.78□□□□□ -1.8
CBX3P9-201ENST00000402326 FBXO27Q8NI29 283 aa3.78□□□□□ -1.8
CBX3P9-201ENST00000402326 UBXN4Q92575 508 aa3.78□□□□□ -1.8
CBX3P9-201ENST00000402326 NKD1Q969G9 470 aa3.78□□□□□ -1.8
CBX3P9-201ENST00000402326 UTP4Q969X6 686 aaKnown RBP3.78□□□□□ -1.8
CBX3P9-201ENST00000402326 GPRASP2Q96D09 838 aa3.78□□□□□ -1.8
CBX3P9-201ENST00000402326 MEGF10Q96KG7 1140 aa3.78□□□□□ -1.8
CBX3P9-201ENST00000402326 YIPF2Q9BWQ6 316 aa3.78□□□□□ -1.8
CBX3P9-201ENST00000402326 LRRC3Q9BY71 257 aa3.78□□□□□ -1.8
CBX3P9-201ENST00000402326 GSX1Q9H4S2 264 aaPredicted RBP3.78□□□□□ -1.8
CBX3P9-201ENST00000402326 PIDD1Q9HB75 910 aa3.78□□□□□ -1.8
CBX3P9-201ENST00000402326 DISC1Q9NRI5 854 aa3.78□□□□□ -1.8
CBX3P9-201ENST00000402326 HIF3AQ9Y2N7 669 aa3.78□□□□□ -1.8
CBX3P9-201ENST00000402326 ACTL7BQ9Y614 415 aa3.78□□□□□ -1.8
CBX3P9-201ENST00000402326 TACC3Q9Y6A5 838 aa3.78□□□□□ -1.8
CBX3P9-201ENST00000402326 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.77□□□□□ -1.81
CBX3P9-201ENST00000402326 PRAMEF27A3QJZ7 478 aa3.77□□□□□ -1.81
CBX3P9-201ENST00000402326 FANCGO15287 622 aa3.77□□□□□ -1.81
CBX3P9-201ENST00000402326 DHX15O43143 795 aaKnown RBP3.77□□□□□ -1.81
CBX3P9-201ENST00000402326 RNGTTO60942 597 aaKnown RBP3.77□□□□□ -1.81
CBX3P9-201ENST00000402326 BMP3P12645 472 aa3.77□□□□□ -1.81
CBX3P9-201ENST00000402326 ATP2B1P20020 1258 aa3.77□□□□□ -1.81
CBX3P9-201ENST00000402326 MCM4P33991 863 aa3.77□□□□□ -1.81
CBX3P9-201ENST00000402326 GTF2F1P35269 517 aaKnown RBP eCLIP3.77□□□□□ -1.81
CBX3P9-201ENST00000402326 CRKP46108 304 aa3.77□□□□□ -1.81
CBX3P9-201ENST00000402326 ARID5AQ03989 594 aa3.77□□□□□ -1.81
CBX3P9-201ENST00000402326 RING1Q06587 406 aa3.77□□□□□ -1.81
CBX3P9-201ENST00000402326 PDE4BQ07343 736 aa3.77□□□□□ -1.81
CBX3P9-201ENST00000402326 TTLL4Q14679 1199 aa3.77□□□□□ -1.81
CBX3P9-201ENST00000402326 SEZ6Q53EL9 994 aa3.77□□□□□ -1.81
CBX3P9-201ENST00000402326 PPM1JQ5JR12 505 aa3.77□□□□□ -1.81
CBX3P9-201ENST00000402326 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.77□□□□□ -1.81
CBX3P9-201ENST00000402326 SLITRK4Q8IW52 837 aa3.77□□□□□ -1.81
CBX3P9-201ENST00000402326 RASGRP4Q8TDF6 673 aa3.77□□□□□ -1.81
CBX3P9-201ENST00000402326 MYRFLQ96LU7 910 aa3.77□□□□□ -1.81
CBX3P9-201ENST00000402326 DNAJC2Q99543 621 aaKnown RBP3.77□□□□□ -1.81
CBX3P9-201ENST00000402326 SSBP4Q9BWG4 385 aaPredicted RBP3.77□□□□□ -1.81
CBX3P9-201ENST00000402326 SSU72Q9NP77 194 aaKnown RBP3.77□□□□□ -1.81
CBX3P9-201ENST00000402326 FAM105AQ9NUU6 356 aa3.77□□□□□ -1.81
CBX3P9-201ENST00000402326 COL17A1Q9UMD9 1497 aaPredicted RBP3.76□□□□□ -1.81
CBX3P9-201ENST00000402326 HCLS1P14317 486 aaPredicted RBP3.76□□□□□ -1.81
CBX3P9-201ENST00000402326 RAB6AP20340 208 aa3.76□□□□□ -1.81
CBX3P9-201ENST00000402326 MAP4P27816 1152 aaKnown RBP3.76□□□□□ -1.81
CBX3P9-201ENST00000402326 RXRBP28702 533 aa3.76□□□□□ -1.81
CBX3P9-201ENST00000402326 GRK4P32298 578 aa3.76□□□□□ -1.81
CBX3P9-201ENST00000402326 ZNF165P49910 485 aa3.76□□□□□ -1.81
CBX3P9-201ENST00000402326 ETF1P62495 437 aaKnown RBP3.76□□□□□ -1.81
CBX3P9-201ENST00000402326 COL9A2Q14055 689 aaPredicted RBP3.76□□□□□ -1.81
CBX3P9-201ENST00000402326 ZBTB37Q5TC79 503 aa3.76□□□□□ -1.81
CBX3P9-201ENST00000402326 CDPF1Q6NVV7 123 aa3.76□□□□□ -1.81
CBX3P9-201ENST00000402326 CDC37L1Q7L3B6 337 aa3.76□□□□□ -1.81
CBX3P9-201ENST00000402326 FAM20CQ8IXL6 584 aa3.76□□□□□ -1.81
CBX3P9-201ENST00000402326 SMYD4Q8IYR2 804 aaPredicted RBP3.76□□□□□ -1.81
CBX3P9-201ENST00000402326 REXO1Q8N1G1 1221 aaKnown RBP3.76□□□□□ -1.81
CBX3P9-201ENST00000402326 ARMC10Q8N2F6 343 aa3.76□□□□□ -1.81
CBX3P9-201ENST00000402326 KCT2Q8NC54 265 aa3.76□□□□□ -1.81
CBX3P9-201ENST00000402326 ZNF507Q8TCN5 953 aa3.76□□□□□ -1.81
CBX3P9-201ENST00000402326 FBLIM1Q8WUP2 373 aa3.76□□□□□ -1.81
CBX3P9-201ENST00000402326 TP53INP1Q96A56 240 aa3.76□□□□□ -1.81
CBX3P9-201ENST00000402326 SEC16BQ96JE7 1060 aa3.76□□□□□ -1.81
CBX3P9-201ENST00000402326 GMLQ99445 158 aa3.76□□□□□ -1.81
CBX3P9-201ENST00000402326 WNT10AQ9GZT5 417 aa3.76□□□□□ -1.81
CBX3P9-201ENST00000402326 KCNF1Q9H3M0 494 aa3.76□□□□□ -1.81
CBX3P9-201ENST00000402326 ACSS3Q9H6R3 686 aa3.76□□□□□ -1.81
CBX3P9-201ENST00000402326 BRMS1Q9HCU9 246 aa3.76□□□□□ -1.81
CBX3P9-201ENST00000402326 PCOLCE2Q9UKZ9 415 aa3.76□□□□□ -1.81
CBX3P9-201ENST00000402326 PRR36Q9H6K5 1346 aa3.75□□□□□ -1.81
CBX3P9-201ENST00000402326 FAM95CA0A1B0GW59 222 aa3.75□□□□□ -1.81
CBX3P9-201ENST00000402326 GRIN3BO60391 1043 aa3.75□□□□□ -1.81
CBX3P9-201ENST00000402326 PGRP06401 933 aa3.75□□□□□ -1.81
CBX3P9-201ENST00000402326 NEFMP07197 916 aa3.75□□□□□ -1.81
CBX3P9-201ENST00000402326 NFICP08651 508 aa3.75□□□□□ -1.81
CBX3P9-201ENST00000402326 ATF4P18848 351 aaPredicted RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms