RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 FOXN1O15353 648 aa8.81□□□□□ -1
HDAC9-201ENST00000401921 CUTAO60888 179 aa8.81□□□□□ -1
HDAC9-201ENST00000401921 SHC4Q6S5L8 630 aa8.81□□□□□ -1
HDAC9-201ENST00000401921 SARM1Q6SZW1 724 aa8.81□□□□□ -1
HDAC9-201ENST00000401921 FANCBQ8NB91 859 aa8.81□□□□□ -1
HDAC9-201ENST00000401921 CCDC150Q8NCX0 1101 aa8.81□□□□□ -1
HDAC9-201ENST00000401921 EPB41L4AQ9HCS5 686 aaPredicted RBP8.81□□□□□ -1
HDAC9-201ENST00000401921 SERTAD1Q9UHV2 236 aa8.81□□□□□ -1
HDAC9-201ENST00000401921 CEP131Q9UPN4 1083 aa8.81□□□□□ -1
HDAC9-201ENST00000401921 TNKSO95271 1327 aa8.81□□□□□ -1
HDAC9-201ENST00000401921 TSPY2A6NKD2 308 aa8.81□□□□□ -1
HDAC9-201ENST00000401921 DEXIO95424 95 aa8.81□□□□□ -1
HDAC9-201ENST00000401921 NLRP5P59047 1200 aa8.81□□□□□ -1
HDAC9-201ENST00000401921 RBM6P78332 1123 aaKnown RBP8.81□□□□□ -1
HDAC9-201ENST00000401921 ZNF174Q15697 407 aa8.81□□□□□ -1
HDAC9-201ENST00000401921 PARP10Q53GL7 1025 aa8.81□□□□□ -1
HDAC9-201ENST00000401921 TICAM2Q86XR7 235 aa8.81□□□□□ -1
HDAC9-201ENST00000401921 CTCFLQ8NI51 663 aaPredicted RBP8.81□□□□□ -1
HDAC9-201ENST00000401921 N4BP2Q86UW6 1770 aaPredicted RBP8.81□□□□□ -1
HDAC9-201ENST00000401921 TRIM75PA6NK02 468 aa8.8□□□□□ -1
HDAC9-201ENST00000401921 CDC25BP30305 580 aa8.8□□□□□ -1
HDAC9-201ENST00000401921 NBPF3Q9H094 633 aa8.8□□□□□ -1
HDAC9-201ENST00000401921 AATFQ9NY61 560 aaKnown RBP eCLIP8.8□□□□□ -1
HDAC9-201ENST00000401921 MROH7-TTC4A0A0A0MT08 1334 aa8.8□□□□□ -1
HDAC9-201ENST00000401921 DCCP43146 1447 aa8.8□□□□□ -1
HDAC9-201ENST00000401921 USP17L12C9JPN9 530 aa8.8□□□□□ -1
HDAC9-201ENST00000401921 USP17L21D6R901 530 aa8.8□□□□□ -1
HDAC9-201ENST00000401921 ARID4AP29374 1257 aaPredicted RBP8.8□□□□□ -1
HDAC9-201ENST00000401921 RILPL1Q5EBL4 403 aa8.8□□□□□ -1
HDAC9-201ENST00000401921 FAM47AQ5JRC9 791 aa8.8□□□□□ -1
HDAC9-201ENST00000401921 AXDND1Q5T1B0 1012 aaPredicted RBP8.8□□□□□ -1
HDAC9-201ENST00000401921 KRBA2Q6ZNG9 492 aa8.8□□□□□ -1
HDAC9-201ENST00000401921 DACH1Q9UI36 760 aa8.8□□□□□ -1
HDAC9-201ENST00000401921 ZNF215Q9UL58 517 aaPredicted RBP8.8□□□□□ -1
HDAC9-201ENST00000401921 PCDHB6Q9Y5E3 794 aa8.8□□□□□ -1
HDAC9-201ENST00000401921 USP54Q70EL1 1684 aa8.8□□□□□ -1
HDAC9-201ENST00000401921 WTIPA6NIX2 430 aaPredicted RBP8.79□□□□□ -1
HDAC9-201ENST00000401921 KCNQ2O43526 872 aa8.79□□□□□ -1
HDAC9-201ENST00000401921 LIFRP42702 1097 aa8.79□□□□□ -1
HDAC9-201ENST00000401921 EVCP57679 992 aa8.79□□□□□ -1
HDAC9-201ENST00000401921 NBPF5PQ86XG9 351 aaPredicted RBP8.79□□□□□ -1
HDAC9-201ENST00000401921 DZIP1Q86YF9 867 aaKnown RBP8.79□□□□□ -1
HDAC9-201ENST00000401921 ZNF34Q8IZ26 560 aa8.79□□□□□ -1
HDAC9-201ENST00000401921 ZNF710Q8N1W2 664 aa8.79□□□□□ -1
HDAC9-201ENST00000401921 NFE2L3Q9Y4A8 694 aa8.79□□□□□ -1
HDAC9-201ENST00000401921 ARFGEF2Q9Y6D5 1785 aa8.79□□□□□ -1
HDAC9-201ENST00000401921 TRPM3Q9HCF6 1732 aaPredicted RBP8.79□□□□□ -1
HDAC9-201ENST00000401921 PPP6R2O75170 966 aa8.79□□□□□ -1
HDAC9-201ENST00000401921 FMNL1O95466 1100 aaPredicted RBP8.79□□□□□ -1
HDAC9-201ENST00000401921 IFNAR1P17181 557 aa8.79□□□□□ -1
HDAC9-201ENST00000401921 USP5P45974 858 aa8.79□□□□□ -1
HDAC9-201ENST00000401921 POSTNQ15063 836 aa8.79□□□□□ -1
HDAC9-201ENST00000401921 ERFEQ4G0M1 354 aa8.79□□□□□ -1
HDAC9-201ENST00000401921 OXER1Q8TDS5 423 aa8.79□□□□□ -1
HDAC9-201ENST00000401921 ANKIB1Q9P2G1 1089 aa8.79□□□□□ -1
HDAC9-201ENST00000401921 VWA3AA6NCI4 1184 aa8.79□□□□□ -1
HDAC9-201ENST00000401921 SMIM22K7EJ46 135 aa8.79□□□□□ -1
HDAC9-201ENST00000401921 ZPR1O75312 459 aa8.79□□□□□ -1
HDAC9-201ENST00000401921 MMP1P03956 469 aa8.79□□□□□ -1
HDAC9-201ENST00000401921 EIF5P55010 431 aaKnown RBP8.79□□□□□ -1
HDAC9-201ENST00000401921 IRX5P78411 483 aaPredicted RBP8.79□□□□□ -1
HDAC9-201ENST00000401921 GRIN1Q05586 938 aa8.79□□□□□ -1
HDAC9-201ENST00000401921 NLRP3Q96P20 1036 aa8.79□□□□□ -1
HDAC9-201ENST00000401921 NOL10Q9BSC4 688 aaKnown RBP8.79□□□□□ -1
HDAC9-201ENST00000401921 IMPACTQ9P2X3 320 aa8.79□□□□□ -1
HDAC9-201ENST00000401921 KIF2AO00139 706 aaPredicted RBP8.78□□□□□ -1
HDAC9-201ENST00000401921 COBLO75128 1261 aa8.78□□□□□ -1
HDAC9-201ENST00000401921 ELF2Q15723 593 aa8.78□□□□□ -1
HDAC9-201ENST00000401921 FAM98CQ17RN3 349 aaKnown RBP8.78□□□□□ -1
HDAC9-201ENST00000401921 PPFIBP1Q86W92 1011 aa8.78□□□□□ -1
HDAC9-201ENST00000401921 CRACR2BQ8N4Y2 399 aaPredicted RBP8.78□□□□□ -1
HDAC9-201ENST00000401921 VGLL2Q8N8G2 317 aa8.78□□□□□ -1
HDAC9-201ENST00000401921 DPF2Q92785 391 aa8.78□□□□□ -1
HDAC9-201ENST00000401921 MKNK2Q9HBH9 465 aa8.78□□□□□ -1
HDAC9-201ENST00000401921 SLU7O95391 586 aaKnown RBP8.78□□□□□ -1
HDAC9-201ENST00000401921 CASP1P29466 404 aa8.78□□□□□ -1
HDAC9-201ENST00000401921 MCM7P33993 719 aa8.78□□□□□ -1
HDAC9-201ENST00000401921 KRT2P35908 639 aa8.78□□□□□ -1
HDAC9-201ENST00000401921 ADKP55263 362 aaKnown RBP8.78□□□□□ -1
HDAC9-201ENST00000401921 FAM182BQ5T319 152 aa8.78□□□□□ -1
HDAC9-201ENST00000401921 SGMS1Q86VZ5 419 aa8.78□□□□□ -1
HDAC9-201ENST00000401921 AMOTL1Q8IY63 956 aa8.78□□□□□ -1
HDAC9-201ENST00000401921 SETDB2Q96T68 719 aa8.78□□□□□ -1
HDAC9-201ENST00000401921 MCM9Q9NXL9 1143 aa8.78□□□□□ -1
HDAC9-201ENST00000401921 PHRF1Q9P1Y6 1649 aaKnown RBP8.78□□□□□ -1
HDAC9-201ENST00000401921 TMEM232C9JQI7 657 aa8.78□□□□□ -1
HDAC9-201ENST00000401921 RAD21O60216 631 aa8.78□□□□□ -1
HDAC9-201ENST00000401921 TPM1P09493 284 aa8.78□□□□□ -1
HDAC9-201ENST00000401921 GNG11P61952 73 aa8.78□□□□□ -1
HDAC9-201ENST00000401921 CCZ1BP86790 482 aa8.78□□□□□ -1
HDAC9-201ENST00000401921 CCZ1P86791 482 aaPredicted RBP8.78□□□□□ -1
HDAC9-201ENST00000401921 FILIP1LQ4L180 1135 aa8.78□□□□□ -1
HDAC9-201ENST00000401921 USP49Q70CQ1 688 aa8.78□□□□□ -1
HDAC9-201ENST00000401921 UBXN4Q92575 508 aa8.78□□□□□ -1
HDAC9-201ENST00000401921 CSRNP2Q9H175 543 aa8.78□□□□□ -1
HDAC9-201ENST00000401921 STX8Q9UNK0 236 aa8.78□□□□□ -1
HDAC9-201ENST00000401921 RIC1Q4ADV7 1423 aa8.77□□□□□ -1
HDAC9-201ENST00000401921 WDR19Q8NEZ3 1342 aa8.77□□□□□ -1
HDAC9-201ENST00000401921 MRC1P22897 1456 aa8.77□□□□□ -1
HDAC9-201ENST00000401921 ABCC12Q96J65 1359 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms