RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 ARMCX5Q6P1M9 558 aa12.75□□□□□ -0.37
SCFD2-202ENST00000401642 SMYD4Q8IYR2 804 aaPredicted RBP12.75□□□□□ -0.37
SCFD2-202ENST00000401642 ZNF654Q8IZM8 581 aa12.75□□□□□ -0.37
SCFD2-202ENST00000401642 MARCH10Q8NA82 808 aaPredicted RBP12.75□□□□□ -0.37
SCFD2-202ENST00000401642 AATFQ9NY61 560 aaKnown RBP eCLIP12.75□□□□□ -0.37
SCFD2-202ENST00000401642 SRP68Q9UHB9 627 aaKnown RBP12.75□□□□□ -0.37
SCFD2-202ENST00000401642 ZNF215Q9UL58 517 aaPredicted RBP12.75□□□□□ -0.37
SCFD2-202ENST00000401642 TNKSO95271 1327 aa12.75□□□□□ -0.37
SCFD2-202ENST00000401642 PDE4BQ07343 736 aa12.75□□□□□ -0.37
SCFD2-202ENST00000401642 NOSTRINQ8IVI9 506 aa12.75□□□□□ -0.37
SCFD2-202ENST00000401642 CELF1Q92879 486 aaKnown RBP12.75□□□□□ -0.37
SCFD2-202ENST00000401642 MAP7D2Q96T17 732 aa12.75□□□□□ -0.37
SCFD2-202ENST00000401642 PLEKHA8P1O95397 391 aa12.75□□□□□ -0.37
SCFD2-202ENST00000401642 CAVIN2O95810 425 aa12.75□□□□□ -0.37
SCFD2-202ENST00000401642 FGFR2P21802 821 aa12.75□□□□□ -0.37
SCFD2-202ENST00000401642 ZNF174Q15697 407 aa12.75□□□□□ -0.37
SCFD2-202ENST00000401642 METTL16Q86W50 562 aaKnown RBP12.75□□□□□ -0.37
SCFD2-202ENST00000401642 GPR101Q96P66 508 aaPredicted RBP12.75□□□□□ -0.37
SCFD2-202ENST00000401642 TNS2Q63HR2 1409 aa12.74□□□□□ -0.37
SCFD2-202ENST00000401642 SRCAPQ6ZRS2 3230 aa12.74□□□□□ -0.37
SCFD2-202ENST00000401642 CYP2D6P10635 497 aa12.74□□□□□ -0.37
SCFD2-202ENST00000401642 ANKRD18AQ8IVF6 992 aa12.74□□□□□ -0.37
SCFD2-202ENST00000401642 GLI3P10071 1580 aa12.74□□□□□ -0.37
SCFD2-202ENST00000401642 USP17L12C9JPN9 530 aa12.74□□□□□ -0.37
SCFD2-202ENST00000401642 USP17L21D6R901 530 aa12.74□□□□□ -0.37
SCFD2-202ENST00000401642 CDC25AP30304 524 aa12.74□□□□□ -0.37
SCFD2-202ENST00000401642 TOB1P50616 345 aaPredicted RBP12.74□□□□□ -0.37
SCFD2-202ENST00000401642 NCBP1Q09161 790 aaKnown RBP12.74□□□□□ -0.37
SCFD2-202ENST00000401642 KRI1Q8N9T8 703 aaKnown RBP12.74□□□□□ -0.37
SCFD2-202ENST00000401642 FANCBQ8NB91 859 aa12.74□□□□□ -0.37
SCFD2-202ENST00000401642 KRT23Q9C075 422 aa12.74□□□□□ -0.37
SCFD2-202ENST00000401642 BCL9O00512 1426 aa12.74□□□□□ -0.37
SCFD2-202ENST00000401642 ZBTB22O15209 634 aa12.73□□□□□ -0.37
SCFD2-202ENST00000401642 CAMTA2O94983 1202 aa12.73□□□□□ -0.37
SCFD2-202ENST00000401642 PTPAQ15257 358 aa12.73□□□□□ -0.37
SCFD2-202ENST00000401642 EARS2Q5JPH6 523 aaKnown RBP12.73□□□□□ -0.37
SCFD2-202ENST00000401642 CCAR2Q8N163 923 aaKnown RBP12.73□□□□□ -0.37
SCFD2-202ENST00000401642 EPSTI1Q96J88 318 aa12.73□□□□□ -0.37
SCFD2-202ENST00000401642 TMEM51Q9NW97 253 aa12.73□□□□□ -0.37
SCFD2-202ENST00000401642 SARM1Q6SZW1 724 aa12.73□□□□□ -0.37
SCFD2-202ENST00000401642 CCDC94Q9BW85 323 aaPredicted RBP12.73□□□□□ -0.37
SCFD2-202ENST00000401642 MAPK8IP1Q9UQF2 711 aa12.73□□□□□ -0.37
SCFD2-202ENST00000401642 TJP1Q07157 1748 aa12.73□□□□□ -0.37
SCFD2-202ENST00000401642 SMTNL1A8MU46 457 aa12.73□□□□□ -0.37
SCFD2-202ENST00000401642 ERVV-1B6SEH8 477 aa12.73□□□□□ -0.37
SCFD2-202ENST00000401642 ADKP55263 362 aaKnown RBP12.73□□□□□ -0.37
SCFD2-202ENST00000401642 NCAPHQ15003 741 aa12.73□□□□□ -0.37
SCFD2-202ENST00000401642 ELF2Q15723 593 aa12.73□□□□□ -0.37
SCFD2-202ENST00000401642 IFIT1BQ5T764 474 aaKnown RBP12.73□□□□□ -0.37
SCFD2-202ENST00000401642 PLIN2Q99541 437 aa12.73□□□□□ -0.37
SCFD2-202ENST00000401642 DNAI1Q9UI46 699 aa12.73□□□□□ -0.37
SCFD2-202ENST00000401642 MYO5AQ9Y4I1 1855 aaKnown RBP12.73□□□□□ -0.37
SCFD2-202ENST00000401642 VEGFAP15692 232 aaPredicted RBP12.72□□□□□ -0.37
SCFD2-202ENST00000401642 CAVIN4Q5BKX8 364 aa12.72□□□□□ -0.37
SCFD2-202ENST00000401642 KRBA2Q6ZNG9 492 aa12.72□□□□□ -0.37
SCFD2-202ENST00000401642 LRRN4CLQ8ND94 238 aa12.72□□□□□ -0.37
SCFD2-202ENST00000401642 MAP3K14Q99558 947 aa12.72□□□□□ -0.37
SCFD2-202ENST00000401642 CSRNP2Q9H175 543 aa12.72□□□□□ -0.37
SCFD2-202ENST00000401642 PKD1L3Q7Z443 1732 aa12.72□□□□□ -0.37
SCFD2-202ENST00000401642 KDM4FA0A1W2PPD8 638 aa12.72□□□□□ -0.37
SCFD2-202ENST00000401642 WNT7AO00755 349 aa12.72□□□□□ -0.37
SCFD2-202ENST00000401642 FMNL1O95466 1100 aaPredicted RBP12.72□□□□□ -0.37
SCFD2-202ENST00000401642 MMP1P03956 469 aa12.72□□□□□ -0.37
SCFD2-202ENST00000401642 TOP1P11387 765 aaKnown RBP12.72□□□□□ -0.37
SCFD2-202ENST00000401642 MYL5Q02045 173 aa12.72□□□□□ -0.37
SCFD2-202ENST00000401642 CRACR2BQ8N4Y2 399 aaPredicted RBP12.72□□□□□ -0.37
SCFD2-202ENST00000401642 EEF2KMTQ96G04 330 aa12.72□□□□□ -0.37
SCFD2-202ENST00000401642 CNNM2Q9H8M5 875 aa12.72□□□□□ -0.37
SCFD2-202ENST00000401642 BMP6P22004 513 aa12.71□□□□□ -0.37
SCFD2-202ENST00000401642 PRDX5P30044 214 aa12.71□□□□□ -0.37
SCFD2-202ENST00000401642 E4F1Q66K89 784 aaPredicted RBP12.71□□□□□ -0.37
SCFD2-202ENST00000401642 ESR2Q92731 530 aa12.71□□□□□ -0.37
SCFD2-202ENST00000401642 CDC5LQ99459 802 aaKnown RBP12.71□□□□□ -0.37
SCFD2-202ENST00000401642 NFE2L3Q9Y4A8 694 aa12.71□□□□□ -0.37
SCFD2-202ENST00000401642 VWA3AA6NCI4 1184 aa12.71□□□□□ -0.37
SCFD2-202ENST00000401642 PES1O00541 588 aaKnown RBP12.71□□□□□ -0.37
SCFD2-202ENST00000401642 NTSR2O95665 410 aa12.71□□□□□ -0.37
SCFD2-202ENST00000401642 FMR1Q06787 632 aaKnown RBP eCLIP12.71□□□□□ -0.372e-6■■■■□ 22.7
SCFD2-202ENST00000401642 KIF18AQ8NI77 898 aa12.71□□□□□ -0.37
SCFD2-202ENST00000401642 BLZF1Q9H2G9 400 aa12.71□□□□□ -0.37
SCFD2-202ENST00000401642 SAMSN1Q9NSI8 373 aaKnown RBP12.71□□□□□ -0.37
SCFD2-202ENST00000401642 IFNAR1P17181 557 aa12.71□□□□□ -0.38
SCFD2-202ENST00000401642 CDC25BP30305 580 aa12.71□□□□□ -0.38
SCFD2-202ENST00000401642 ENAHQ8N8S7 591 aaPredicted RBP12.71□□□□□ -0.38
SCFD2-202ENST00000401642 RASSF8Q8NHQ8 419 aa12.71□□□□□ -0.38
SCFD2-202ENST00000401642 DESI2Q9BSY9 194 aa12.71□□□□□ -0.38
SCFD2-202ENST00000401642 GNL3LQ9NVN8 582 aaKnown RBP12.71□□□□□ -0.38
SCFD2-202ENST00000401642 NWD2Q9ULI1 1742 aa12.7□□□□□ -0.38
SCFD2-202ENST00000401642 NRDCO43847 1150 aa12.7□□□□□ -0.38
SCFD2-202ENST00000401642 POSTNQ15063 836 aa12.7□□□□□ -0.38
SCFD2-202ENST00000401642 RESP18Q5W5W9 173 aa12.7□□□□□ -0.38
SCFD2-202ENST00000401642 RASGRP4Q8TDF6 673 aa12.7□□□□□ -0.38
SCFD2-202ENST00000401642 SMARCE1Q969G3 411 aa12.7□□□□□ -0.38
SCFD2-202ENST00000401642 C8orf37Q96NL8 207 aa12.7□□□□□ -0.38
SCFD2-202ENST00000401642 ZSWIM4Q9H7M6 989 aa12.7□□□□□ -0.38
SCFD2-202ENST00000401642 CUTAO60888 179 aa12.7□□□□□ -0.38
SCFD2-202ENST00000401642 URI1O94763 535 aaPredicted RBP12.7□□□□□ -0.38
SCFD2-202ENST00000401642 MCM7P33993 719 aa12.7□□□□□ -0.38
SCFD2-202ENST00000401642 LIFRP42702 1097 aa12.7□□□□□ -0.38
SCFD2-202ENST00000401642 TBC1D9BQ66K14 1250 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms