RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 KIAA1211Q6ZU35 1233 aa19.02■□□□□ 0.64
HMGA1-204ENST00000401473 MOB2Q70IA6 237 aa19.02■□□□□ 0.64
HMGA1-204ENST00000401473 DYNLL2Q96FJ2 89 aa19.02■□□□□ 0.64
HMGA1-204ENST00000401473 ARPP21Q9UBL0 812 aaPredicted RBP19.02■□□□□ 0.64
HMGA1-204ENST00000401473 USP2O75604 605 aaPredicted RBP19.01■□□□□ 0.63
HMGA1-204ENST00000401473 HTRA3P83110 453 aa19.01■□□□□ 0.63
HMGA1-204ENST00000401473 GABPAQ06546 454 aa19.01■□□□□ 0.63
HMGA1-204ENST00000401473 FOXP4Q8IVH2 680 aaPredicted RBP19.01■□□□□ 0.63
HMGA1-204ENST00000401473 STK11IPQ8N1F8 1099 aa19.01■□□□□ 0.63
HMGA1-204ENST00000401473 TACC3Q9Y6A5 838 aa19.01■□□□□ 0.63
HMGA1-204ENST00000401473 TRPM7Q96QT4 1865 aa19.01■□□□□ 0.63
HMGA1-204ENST00000401473 INCENPQ9NQS7 918 aa19.01■□□□□ 0.63
HMGA1-204ENST00000401473 SERPINB13Q9UIV8 391 aa19.01■□□□□ 0.63
HMGA1-204ENST00000401473 ZMYM6O95789 1325 aa19■□□□□ 0.63
HMGA1-204ENST00000401473 TMEM88BA6NKF7 163 aa19■□□□□ 0.63
HMGA1-204ENST00000401473 TBC1D12O60347 775 aa19■□□□□ 0.63
HMGA1-204ENST00000401473 HLA-DOAP06340 250 aa19■□□□□ 0.63
HMGA1-204ENST00000401473 HAND2P61296 217 aa19■□□□□ 0.63
HMGA1-204ENST00000401473 CTDSPL2Q05D32 466 aa19■□□□□ 0.63
HMGA1-204ENST00000401473 PPARAQ07869 468 aa19■□□□□ 0.63
HMGA1-204ENST00000401473 SLC44A5Q8NCS7 719 aa19■□□□□ 0.63
HMGA1-204ENST00000401473 NBPF3Q9H094 633 aa19■□□□□ 0.63
HMGA1-204ENST00000401473 RBM8AQ9Y5S9 174 aaKnown RBP19■□□□□ 0.63
HMGA1-204ENST00000401473 PHF20L1A8MW92 1017 aa18.99■□□□□ 0.63
HMGA1-204ENST00000401473 RRP1BQ14684 758 aaKnown RBP18.99■□□□□ 0.63
HMGA1-204ENST00000401473 EHD4Q9H223 541 aa18.99■□□□□ 0.63
HMGA1-204ENST00000401473 GBA2Q9HCG7 927 aaPredicted RBP18.99■□□□□ 0.63
HMGA1-204ENST00000401473 TAF6LQ9Y6J9 622 aa18.99■□□□□ 0.63
HMGA1-204ENST00000401473 NECTIN1Q15223 517 aa18.99■□□□□ 0.63
HMGA1-204ENST00000401473 KLRG1Q96E93 195 aa18.99■□□□□ 0.63
HMGA1-204ENST00000401473 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.99■□□□□ 0.63
HMGA1-204ENST00000401473 ANAPC4Q9UJX5 808 aa18.99■□□□□ 0.63
HMGA1-204ENST00000401473 CYP21A2P08686 494 aa18.98■□□□□ 0.63
HMGA1-204ENST00000401473 HSPA6P17066 643 aa18.98■□□□□ 0.63
HMGA1-204ENST00000401473 SAPCD2Q86UD0 394 aa18.98■□□□□ 0.63
HMGA1-204ENST00000401473 USP26Q9BXU7 913 aa18.98■□□□□ 0.63
HMGA1-204ENST00000401473 HERC5Q9UII4 1024 aaKnown RBP18.98■□□□□ 0.63
HMGA1-204ENST00000401473 U3KPZ7 1027 aaPredicted RBP18.98■□□□□ 0.63
HMGA1-204ENST00000401473 ZNF213O14771 459 aa18.97■□□□□ 0.63
HMGA1-204ENST00000401473 PPP1R12BO60237 982 aaPredicted RBP18.97■□□□□ 0.63
HMGA1-204ENST00000401473 REC8O95072 547 aa18.97■□□□□ 0.63
HMGA1-204ENST00000401473 SHMT1P34896 483 aa18.97■□□□□ 0.63
HMGA1-204ENST00000401473 NF2P35240 595 aa18.97■□□□□ 0.63
HMGA1-204ENST00000401473 CDK8P49336 464 aa18.97■□□□□ 0.63
HMGA1-204ENST00000401473 C16orf86Q6ZW13 317 aa18.97■□□□□ 0.63
HMGA1-204ENST00000401473 AMOTL1Q8IY63 956 aa18.97■□□□□ 0.63
HMGA1-204ENST00000401473 CRACR2BQ8N4Y2 399 aaPredicted RBP18.97■□□□□ 0.63
HMGA1-204ENST00000401473 CTNNA3Q9UI47 895 aa18.97■□□□□ 0.63
HMGA1-204ENST00000401473 ZNF112Q9UJU3 913 aa18.97■□□□□ 0.63
HMGA1-204ENST00000401473 ANGEL1Q9UNK9 670 aaKnown RBP18.97■□□□□ 0.63
HMGA1-204ENST00000401473 UBE2Q2LH0YL09 131 aa18.97■□□□□ 0.63
HMGA1-204ENST00000401473 TATDN1Q6P1N9 297 aa18.97■□□□□ 0.63
HMGA1-204ENST00000401473 NKX2-3Q8TAU0 364 aa18.97■□□□□ 0.63
HMGA1-204ENST00000401473 HOOK2Q96ED9 719 aa18.97■□□□□ 0.63
HMGA1-204ENST00000401473 CREBZFQ9NS37 354 aa18.97■□□□□ 0.63
HMGA1-204ENST00000401473 INPP5BP32019 993 aa18.96■□□□□ 0.63
HMGA1-204ENST00000401473 JAG1P78504 1218 aa18.96■□□□□ 0.63
HMGA1-204ENST00000401473 MAP3K11Q16584 847 aa18.96■□□□□ 0.63
HMGA1-204ENST00000401473 SHROOM1Q2M3G4 852 aaPredicted RBP18.96■□□□□ 0.63
HMGA1-204ENST00000401473 DCAF15Q66K64 600 aa18.96■□□□□ 0.63
HMGA1-204ENST00000401473 TBC1D10CQ8IV04 446 aa18.96■□□□□ 0.63
HMGA1-204ENST00000401473 C2orf69Q8N8R5 385 aa18.96■□□□□ 0.63
HMGA1-204ENST00000401473 ZKSCAN4Q969J2 545 aaPredicted RBP18.96■□□□□ 0.63
HMGA1-204ENST00000401473 LAMB1P07942 1786 aa18.96■□□□□ 0.63
HMGA1-204ENST00000401473 ROBO3Q96MS0 1386 aa18.95■□□□□ 0.62
HMGA1-204ENST00000401473 PRDM1O75626 825 aa18.95■□□□□ 0.62
HMGA1-204ENST00000401473 TTLL12Q14166 644 aaPredicted RBP18.95■□□□□ 0.62
HMGA1-204ENST00000401473 IMMTQ16891 758 aaKnown RBP18.95■□□□□ 0.62
HMGA1-204ENST00000401473 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.95■□□□□ 0.62
HMGA1-204ENST00000401473 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.95■□□□□ 0.62
HMGA1-204ENST00000401473 ZNF341Q9BYN7 854 aa18.95■□□□□ 0.62
HMGA1-204ENST00000401473 TLL2Q9Y6L7 1015 aa18.95■□□□□ 0.62
HMGA1-204ENST00000401473 FGRP09769 529 aa18.94■□□□□ 0.62
HMGA1-204ENST00000401473 CREB3L3Q68CJ9 461 aa18.94■□□□□ 0.62
HMGA1-204ENST00000401473 WRNIP1Q96S55 665 aa18.94■□□□□ 0.62
HMGA1-204ENST00000401473 ABT1Q9ULW3 272 aaKnown RBP18.94■□□□□ 0.62
HMGA1-204ENST00000401473 SLC27A2O14975 620 aa18.94■□□□□ 0.62
HMGA1-204ENST00000401473 HUNKP57058 714 aa18.94■□□□□ 0.62
HMGA1-204ENST00000401473 FKBP1BP68106 108 aa18.94■□□□□ 0.62
HMGA1-204ENST00000401473 LDLRAD1Q5T700 205 aa18.94■□□□□ 0.62
HMGA1-204ENST00000401473 RASEFQ8IZ41 740 aa18.94■□□□□ 0.62
HMGA1-204ENST00000401473 SWAP70Q9UH65 585 aa18.94■□□□□ 0.62
HMGA1-204ENST00000401473 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.94■□□□□ 0.62
HMGA1-204ENST00000401473 LAMA4Q16363 1823 aa18.93■□□□□ 0.62
HMGA1-204ENST00000401473 RASA1P20936 1047 aa18.93■□□□□ 0.62
HMGA1-204ENST00000401473 AKNAD1Q5T1N1 836 aa18.93■□□□□ 0.62
HMGA1-204ENST00000401473 TRIM34Q9BYJ4 488 aa18.93■□□□□ 0.62
HMGA1-204ENST00000401473 MYH8P13535 1937 aa18.93■□□□□ 0.62
HMGA1-204ENST00000401473 HSPA4P34932 840 aa18.92■□□□□ 0.62
HMGA1-204ENST00000401473 CAP2P40123 477 aa18.92■□□□□ 0.62
HMGA1-204ENST00000401473 MAP3K9P80192 1104 aa18.92■□□□□ 0.62
HMGA1-204ENST00000401473 COL9A3Q14050 684 aaPredicted RBP18.92■□□□□ 0.62
HMGA1-204ENST00000401473 CERKLQ49MI3 558 aaPredicted RBP18.92■□□□□ 0.62
HMGA1-204ENST00000401473 ARMC9Q7Z3E5 817 aa18.92■□□□□ 0.62
HMGA1-204ENST00000401473 STAG1Q8WVM7 1258 aa18.92■□□□□ 0.62
HMGA1-204ENST00000401473 CLMNQ96JQ2 1002 aa18.92■□□□□ 0.62
HMGA1-204ENST00000401473 BACH2Q9BYV9 841 aa18.92■□□□□ 0.62
HMGA1-204ENST00000401473 MKNK2Q9HBH9 465 aa18.92■□□□□ 0.62
HMGA1-204ENST00000401473 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.92■□□□□ 0.62
HMGA1-204ENST00000401473 PAPPA2Q9BXP8 1791 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms