RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.02■□□□□ 0.48
VAMP1-203ENST00000400911 AKAP2Q9Y2D5 859 aa18.02■□□□□ 0.48
VAMP1-203ENST00000400911 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.02■□□□□ 0.48
VAMP1-203ENST00000400911 NPM3O75607 178 aaKnown RBP18.01■□□□□ 0.47
VAMP1-203ENST00000400911 GCLCP48506 637 aaPredicted RBP18.01■□□□□ 0.47
VAMP1-203ENST00000400911 HMGCS2P54868 508 aa18.01■□□□□ 0.47
VAMP1-203ENST00000400911 RRP1BQ14684 758 aaKnown RBP18.01■□□□□ 0.47
VAMP1-203ENST00000400911 SLC17A8Q8NDX2 589 aa18.01■□□□□ 0.47
VAMP1-203ENST00000400911 API5Q9BZZ5 524 aaKnown RBP18.01■□□□□ 0.47
VAMP1-203ENST00000400911 OSBPL5Q9H0X9 879 aaPredicted RBP18.01■□□□□ 0.47
VAMP1-203ENST00000400911 HMG20BQ9P0W2 317 aa18.01■□□□□ 0.47
VAMP1-203ENST00000400911 GJD2Q9UKL4 321 aa18.01■□□□□ 0.47
VAMP1-203ENST00000400911 SRGAP3O43295 1099 aa18■□□□□ 0.47
VAMP1-203ENST00000400911 CAP2P40123 477 aa18■□□□□ 0.47
VAMP1-203ENST00000400911 GSTO1P78417 241 aa18■□□□□ 0.47
VAMP1-203ENST00000400911 TRIM32Q13049 653 aa18■□□□□ 0.47
VAMP1-203ENST00000400911 PI16Q6UXB8 463 aa18■□□□□ 0.47
VAMP1-203ENST00000400911 TRMT2AQ8IZ69 625 aaKnown RBP18■□□□□ 0.47
VAMP1-203ENST00000400911 NSUN4Q96CB9 384 aaKnown RBP18■□□□□ 0.47
VAMP1-203ENST00000400911 ASCC2Q9H1I8 757 aaPredicted RBP18■□□□□ 0.47
VAMP1-203ENST00000400911 HMGCRP04035 888 aa17.99■□□□□ 0.47
VAMP1-203ENST00000400911 LDHCP07864 332 aa17.99■□□□□ 0.47
VAMP1-203ENST00000400911 PABPC4Q13310 644 aaKnown RBP eCLIP17.99■□□□□ 0.47
VAMP1-203ENST00000400911 SPATA5Q8NB90 893 aa17.99■□□□□ 0.47
VAMP1-203ENST00000400911 USP17L5A8MUK1 530 aa17.98■□□□□ 0.47
VAMP1-203ENST00000400911 MAP4K4O95819 1239 aaPredicted RBP17.98■□□□□ 0.47
VAMP1-203ENST00000400911 GORABQ5T7V8 394 aa17.98■□□□□ 0.47
VAMP1-203ENST00000400911 C7orf61Q8IZ16 206 aa17.98■□□□□ 0.47
VAMP1-203ENST00000400911 TBC1D2Q9BYX2 928 aa17.98■□□□□ 0.47
VAMP1-203ENST00000400911 HMX1Q9NP08 348 aaPredicted RBP17.98■□□□□ 0.47
VAMP1-203ENST00000400911 RAI14Q9P0K7 980 aa17.98■□□□□ 0.47
VAMP1-203ENST00000400911 ZMYND8Q9ULU4 1186 aaPredicted RBP17.98■□□□□ 0.47
VAMP1-203ENST00000400911 RPTORQ8N122 1335 aa17.98■□□□□ 0.47
VAMP1-203ENST00000400911 DLL1O00548 723 aa17.97■□□□□ 0.47
VAMP1-203ENST00000400911 SH3D19Q5HYK7 790 aa17.97■□□□□ 0.47
VAMP1-203ENST00000400911 TEX11Q8IYF3 940 aa17.97■□□□□ 0.47
VAMP1-203ENST00000400911 ANKLE1Q8NAG6 615 aa17.97■□□□□ 0.47
VAMP1-203ENST00000400911 GDF15Q99988 308 aa17.97■□□□□ 0.47
VAMP1-203ENST00000400911 GNAI3P08754 354 aa17.96■□□□□ 0.47
VAMP1-203ENST00000400911 CT47B1P0C2W7 299 aaPredicted RBP17.96■□□□□ 0.47
VAMP1-203ENST00000400911 MNX1P50219 401 aaPredicted RBP17.96■□□□□ 0.47
VAMP1-203ENST00000400911 SH3RF3Q8TEJ3 882 aaPredicted RBP17.96■□□□□ 0.47
VAMP1-203ENST00000400911 NBPF3Q9H094 633 aa17.96■□□□□ 0.47
VAMP1-203ENST00000400911 AK9Q5TCS8 1911 aa17.96■□□□□ 0.47
VAMP1-203ENST00000400911 PEX10O60683 326 aa17.95■□□□□ 0.46
VAMP1-203ENST00000400911 CYP2B6P20813 491 aa17.95■□□□□ 0.46
VAMP1-203ENST00000400911 BMP8BP34820 402 aa17.95■□□□□ 0.46
VAMP1-203ENST00000400911 MTX1Q13505 466 aa17.95■□□□□ 0.46
VAMP1-203ENST00000400911 MTMR2Q13614 643 aa17.95■□□□□ 0.46
VAMP1-203ENST00000400911 P2RX7Q99572 595 aaKnown RBP17.95■□□□□ 0.46
VAMP1-203ENST00000400911 AS3MTQ9HBK9 375 aa17.95■□□□□ 0.46
VAMP1-203ENST00000400911 LRP2BPQ9P2M1 347 aa17.95■□□□□ 0.46
VAMP1-203ENST00000400911 PI4KBQ9UBF8 816 aa17.95■□□□□ 0.46
VAMP1-203ENST00000400911 MORF4L1Q9UBU8 362 aa17.95■□□□□ 0.46
VAMP1-203ENST00000400911 HERC5Q9UII4 1024 aaKnown RBP17.95■□□□□ 0.46
VAMP1-203ENST00000400911 SYN1P17600 705 aa17.94■□□□□ 0.46
VAMP1-203ENST00000400911 ARID4AP29374 1257 aaPredicted RBP17.94■□□□□ 0.46
VAMP1-203ENST00000400911 MCAMP43121 646 aa17.94■□□□□ 0.46
VAMP1-203ENST00000400911 RARSP54136 660 aaKnown RBP17.94■□□□□ 0.46
VAMP1-203ENST00000400911 BACE1P56817 501 aa17.94■□□□□ 0.46
VAMP1-203ENST00000400911 JAG1P78504 1218 aa17.94■□□□□ 0.46
VAMP1-203ENST00000400911 TRIB2Q92519 343 aa17.94■□□□□ 0.46
VAMP1-203ENST00000400911 WDR18Q9BV38 432 aa17.94■□□□□ 0.46
VAMP1-203ENST00000400911 C11orf49Q9H6J7 331 aa17.94■□□□□ 0.46
VAMP1-203ENST00000400911 OGDHLQ9ULD0 1010 aa17.94■□□□□ 0.46
VAMP1-203ENST00000400911 IRX3P78415 501 aaPredicted RBP17.93■□□□□ 0.46
VAMP1-203ENST00000400911 TXNRD2Q9NNW7 524 aa17.93■□□□□ 0.46
VAMP1-203ENST00000400911 AATFQ9NY61 560 aaKnown RBP eCLIP17.93■□□□□ 0.46
VAMP1-203ENST00000400911 TMOD4Q9NZQ9 345 aa17.93■□□□□ 0.46
VAMP1-203ENST00000400911 COL2A1P02458 1487 aaPredicted RBP17.93■□□□□ 0.46
VAMP1-203ENST00000400911 DOCK2Q92608 1830 aa17.93■□□□□ 0.46
VAMP1-203ENST00000400911 PRKAR2AP13861 404 aaKnown RBP17.92■□□□□ 0.46
VAMP1-203ENST00000400911 HOXA7P31268 230 aaPredicted RBP17.92■□□□□ 0.46
VAMP1-203ENST00000400911 G3BP1Q13283 466 aaKnown RBP eCLIP17.92■□□□□ 0.46
VAMP1-203ENST00000400911 SHROOM1Q2M3G4 852 aaPredicted RBP17.92■□□□□ 0.46
VAMP1-203ENST00000400911 GPRC5AQ8NFJ5 357 aa17.92■□□□□ 0.46
VAMP1-203ENST00000400911 ARHGAP45Q92619 1136 aa17.92■□□□□ 0.46
VAMP1-203ENST00000400911 NOL10Q9BSC4 688 aaKnown RBP17.92■□□□□ 0.46
VAMP1-203ENST00000400911 DHX36Q9H2U1 1008 aaKnown RBP17.92■□□□□ 0.46
VAMP1-203ENST00000400911 SNRKQ9NRH2 765 aa17.92■□□□□ 0.46
VAMP1-203ENST00000400911 MYH13Q9UKX3 1938 aa17.92■□□□□ 0.46
VAMP1-203ENST00000400911 BAG3O95817 575 aa17.91■□□□□ 0.46
VAMP1-203ENST00000400911 ASNSP08243 561 aa17.91■□□□□ 0.46
VAMP1-203ENST00000400911 UQCRFS1P1P0C7P4 283 aa17.91■□□□□ 0.46
VAMP1-203ENST00000400911 MAGEA10P43363 369 aaPredicted RBP17.91■□□□□ 0.46
VAMP1-203ENST00000400911 HERVK_113P62684 666 aa17.91■□□□□ 0.46
VAMP1-203ENST00000400911 MAP3K21Q5TCX8 1036 aa17.91■□□□□ 0.46
VAMP1-203ENST00000400911 NAA16Q6N069 864 aaPredicted RBP17.91■□□□□ 0.46
VAMP1-203ENST00000400911 MAPKAPK5Q8IW41 473 aa17.91■□□□□ 0.46
VAMP1-203ENST00000400911 DEFB123Q8N688 67 aa17.91■□□□□ 0.46
VAMP1-203ENST00000400911 TGFBRAP1Q8WUH2 860 aa17.91■□□□□ 0.46
VAMP1-203ENST00000400911 NUDT12Q9BQG2 462 aa17.91■□□□□ 0.46
VAMP1-203ENST00000400911 RBPJLQ9UBG7 517 aa17.91■□□□□ 0.46
VAMP1-203ENST00000400911 MYH2Q9UKX2 1941 aa17.9■□□□□ 0.46
VAMP1-203ENST00000400911 PNMA6EA0A0J9YXQ4 647 aa17.9■□□□□ 0.46
VAMP1-203ENST00000400911 GNAI2P04899 355 aa17.9■□□□□ 0.46
VAMP1-203ENST00000400911 XRCC5P13010 732 aaKnown RBP17.9■□□□□ 0.46
VAMP1-203ENST00000400911 Q3C1V9 767 aa17.9■□□□□ 0.46
VAMP1-203ENST00000400911 FOXP4Q8IVH2 680 aaPredicted RBP17.9■□□□□ 0.46
VAMP1-203ENST00000400911 DNAJC18Q9H819 358 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms