RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 HDAC5Q9UQL6 1122 aa14.75□□□□□ -0.05
LINC00544-201ENST00000400540 AKAP2Q9Y2D5 859 aa14.75□□□□□ -0.05
LINC00544-201ENST00000400540 FRMPD3Q5JV73 1810 aa14.75□□□□□ -0.05
LINC00544-201ENST00000400540 SGPL1O95470 568 aa14.74□□□□□ -0.05
LINC00544-201ENST00000400540 MTX1Q13505 466 aa14.74□□□□□ -0.05
LINC00544-201ENST00000400540 SPATA5Q8NB90 893 aa14.74□□□□□ -0.05
LINC00544-201ENST00000400540 NSUN4Q96CB9 384 aaKnown RBP14.74□□□□□ -0.05
LINC00544-201ENST00000400540 HTATIP2Q9BUP3 242 aa14.74□□□□□ -0.05
LINC00544-201ENST00000400540 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.74□□□□□ -0.05
LINC00544-201ENST00000400540 TAOK2Q9UL54 1235 aa14.74□□□□□ -0.05
LINC00544-201ENST00000400540 TBC1D12O60347 775 aa14.73□□□□□ -0.05
LINC00544-201ENST00000400540 GNAI3P08754 354 aa14.73□□□□□ -0.05
LINC00544-201ENST00000400540 MCAMP43121 646 aa14.73□□□□□ -0.05
LINC00544-201ENST00000400540 IRF5Q13568 498 aa14.73□□□□□ -0.05
LINC00544-201ENST00000400540 DEFB118Q96PH6 123 aa14.73□□□□□ -0.05
LINC00544-201ENST00000400540 OSBPL5Q9H0X9 879 aaPredicted RBP14.73□□□□□ -0.05
LINC00544-201ENST00000400540 PRO3102Q9H379 93 aa14.73□□□□□ -0.05
LINC00544-201ENST00000400540 DNAH12Q6ZR08 3092 aa14.73□□□□□ -0.05
LINC00544-201ENST00000400540 PNMA6EA0A0J9YXQ4 647 aa14.72□□□□□ -0.05
LINC00544-201ENST00000400540 ZBTB7BO15156 539 aaPredicted RBP14.72□□□□□ -0.05
LINC00544-201ENST00000400540 ARID4AP29374 1257 aaPredicted RBP14.72□□□□□ -0.05
LINC00544-201ENST00000400540 HMGCS2P54868 508 aa14.72□□□□□ -0.05
LINC00544-201ENST00000400540 SPP2Q13103 211 aa14.72□□□□□ -0.05
LINC00544-201ENST00000400540 PROCA1Q8NCQ7 364 aaPredicted RBP14.72□□□□□ -0.05
LINC00544-201ENST00000400540 PXYLP1Q8TE99 480 aa14.72□□□□□ -0.05
LINC00544-201ENST00000400540 RAI14Q9P0K7 980 aa14.72□□□□□ -0.05
LINC00544-201ENST00000400540 NPM3O75607 178 aaKnown RBP14.71□□□□□ -0.05
LINC00544-201ENST00000400540 FAM110CQ1W6H9 321 aa14.71□□□□□ -0.05
LINC00544-201ENST00000400540 GORABQ5T7V8 394 aa14.71□□□□□ -0.05
LINC00544-201ENST00000400540 TEX11Q8IYF3 940 aa14.71□□□□□ -0.05
LINC00544-201ENST00000400540 ZNF280CQ8ND82 737 aa14.71□□□□□ -0.05
LINC00544-201ENST00000400540 SH3RF3Q8TEJ3 882 aaPredicted RBP14.71□□□□□ -0.05
LINC00544-201ENST00000400540 DIS3LQ8TF46 1054 aaKnown RBP14.71□□□□□ -0.05
LINC00544-201ENST00000400540 ARHGAP45Q92619 1136 aa14.71□□□□□ -0.05
LINC00544-201ENST00000400540 PAK6Q9NQU5 681 aaPredicted RBP14.71□□□□□ -0.05
LINC00544-201ENST00000400540 PNMA3Q9UL41 463 aa14.71□□□□□ -0.05
LINC00544-201ENST00000400540 TFRCP02786 760 aaKnown RBP14.7□□□□□ -0.06
LINC00544-201ENST00000400540 TRIM27P14373 513 aa14.7□□□□□ -0.06
LINC00544-201ENST00000400540 CAP2P40123 477 aa14.7□□□□□ -0.06
LINC00544-201ENST00000400540 GSTO1P78417 241 aa14.7□□□□□ -0.06
LINC00544-201ENST00000400540 SHROOM1Q2M3G4 852 aaPredicted RBP14.7□□□□□ -0.06
LINC00544-201ENST00000400540 COA7Q96BR5 231 aa14.7□□□□□ -0.06
LINC00544-201ENST00000400540 PEX10O60683 326 aa14.69□□□□□ -0.06
LINC00544-201ENST00000400540 BCAR3O75815 825 aa14.69□□□□□ -0.06
LINC00544-201ENST00000400540 GNAI2P04899 355 aa14.69□□□□□ -0.06
LINC00544-201ENST00000400540 LDHCP07864 332 aa14.69□□□□□ -0.06
LINC00544-201ENST00000400540 JAG1P78504 1218 aa14.69□□□□□ -0.06
LINC00544-201ENST00000400540 TRIM32Q13049 653 aa14.69□□□□□ -0.06
LINC00544-201ENST00000400540 CLUAP1Q96AJ1 413 aa14.69□□□□□ -0.06
LINC00544-201ENST00000400540 CRISPLD2Q9H0B8 497 aa14.69□□□□□ -0.06
LINC00544-201ENST00000400540 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.69□□□□□ -0.06
LINC00544-201ENST00000400540 ASCC2Q9H1I8 757 aaPredicted RBP14.69□□□□□ -0.06
LINC00544-201ENST00000400540 SNRKQ9NRH2 765 aa14.69□□□□□ -0.06
LINC00544-201ENST00000400540 AATFQ9NY61 560 aaKnown RBP eCLIP14.69□□□□□ -0.06
LINC00544-201ENST00000400540 NR2E3Q9Y5X4 410 aa14.69□□□□□ -0.06
LINC00544-201ENST00000400540 NAV1Q8NEY1 1877 aa14.69□□□□□ -0.06
LINC00544-201ENST00000400540 USP17L5A8MUK1 530 aa14.68□□□□□ -0.06
LINC00544-201ENST00000400540 EVI5O60447 810 aa14.68□□□□□ -0.06
LINC00544-201ENST00000400540 ADGRA1Q86SQ6 560 aa14.68□□□□□ -0.06
LINC00544-201ENST00000400540 FRAT1Q92837 279 aaPredicted RBP14.68□□□□□ -0.06
LINC00544-201ENST00000400540 PAWRQ96IZ0 340 aaKnown RBP14.68□□□□□ -0.06
LINC00544-201ENST00000400540 DNAJC18Q9H819 358 aa14.68□□□□□ -0.06
LINC00544-201ENST00000400540 LRP2BPQ9P2M1 347 aa14.68□□□□□ -0.06
LINC00544-201ENST00000400540 LAMA2P24043 3122 aaKnown RBP14.68□□□□□ -0.06
LINC00544-201ENST00000400540 MAP4K4O95819 1239 aaPredicted RBP14.67□□□□□ -0.06
LINC00544-201ENST00000400540 G3BP1Q13283 466 aaKnown RBP eCLIP14.67□□□□□ -0.06
LINC00544-201ENST00000400540 MTMR2Q13614 643 aa14.67□□□□□ -0.06
LINC00544-201ENST00000400540 SH3D19Q5HYK7 790 aa14.67□□□□□ -0.06
LINC00544-201ENST00000400540 ATF7IPQ6VMQ6 1270 aa14.67□□□□□ -0.06
LINC00544-201ENST00000400540 MAPKAPK5Q8IW41 473 aa14.67□□□□□ -0.06
LINC00544-201ENST00000400540 DBNDD2Q9BQY9 259 aa14.67□□□□□ -0.06
LINC00544-201ENST00000400540 HERC5Q9UII4 1024 aaKnown RBP14.67□□□□□ -0.06
LINC00544-201ENST00000400540 GJD2Q9UKL4 321 aa14.67□□□□□ -0.06
LINC00544-201ENST00000400540 FLT1P17948 1338 aa14.66□□□□□ -0.06
LINC00544-201ENST00000400540 MYH8P13535 1937 aa14.66□□□□□ -0.06
LINC00544-201ENST00000400540 SOX1O00570 391 aaPredicted RBP14.66□□□□□ -0.06
LINC00544-201ENST00000400540 GDF11O95390 407 aa14.66□□□□□ -0.06
LINC00544-201ENST00000400540 HMGCRP04035 888 aa14.66□□□□□ -0.06
LINC00544-201ENST00000400540 UQCRFS1P1P0C7P4 283 aa14.66□□□□□ -0.06
LINC00544-201ENST00000400540 GCLCP48506 637 aaPredicted RBP14.66□□□□□ -0.06
LINC00544-201ENST00000400540 PABPC4Q13310 644 aaKnown RBP eCLIP14.66□□□□□ -0.06
LINC00544-201ENST00000400540 NAA16Q6N069 864 aaPredicted RBP14.66□□□□□ -0.06
LINC00544-201ENST00000400540 TGFBRAP1Q8WUH2 860 aa14.66□□□□□ -0.06
LINC00544-201ENST00000400540 TRIB2Q92519 343 aa14.66□□□□□ -0.06
LINC00544-201ENST00000400540 TBC1D2Q9BYX2 928 aa14.66□□□□□ -0.06
LINC00544-201ENST00000400540 AS3MTQ9HBK9 375 aa14.66□□□□□ -0.06
LINC00544-201ENST00000400540 STAP2Q9UGK3 403 aa14.66□□□□□ -0.06
LINC00544-201ENST00000400540 CYP2E1P05181 493 aaPredicted RBP14.65□□□□□ -0.06
LINC00544-201ENST00000400540 TNNI3KQ59H18 835 aa14.65□□□□□ -0.06
LINC00544-201ENST00000400540 TTC39AQ5SRH9 613 aa14.65□□□□□ -0.06
LINC00544-201ENST00000400540 TMEM57Q8N5G2 664 aa14.65□□□□□ -0.06
LINC00544-201ENST00000400540 NOL10Q9BSC4 688 aaKnown RBP14.65□□□□□ -0.06
LINC00544-201ENST00000400540 TXNRD2Q9NNW7 524 aa14.65□□□□□ -0.06
LINC00544-201ENST00000400540 PI4KBQ9UBF8 816 aa14.65□□□□□ -0.06
LINC00544-201ENST00000400540 MORF4L1Q9UBU8 362 aa14.65□□□□□ -0.06
LINC00544-201ENST00000400540 FPGT-TNNI3KV9GXZ4 949 aa14.65□□□□□ -0.06
LINC00544-201ENST00000400540 CYP2B6P20813 491 aa14.64□□□□□ -0.07
LINC00544-201ENST00000400540 MNX1P50219 401 aaPredicted RBP14.64□□□□□ -0.07
LINC00544-201ENST00000400540 BACE1P56817 501 aa14.64□□□□□ -0.07
LINC00544-201ENST00000400540 IRX3P78415 501 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms