RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 USP48Q86UV5 1035 aa13.89□□□□□ -0.19
CACNA1C-209ENST00000399603 GABPB2Q8TAK5 448 aaPredicted RBP13.89□□□□□ -0.19
CACNA1C-209ENST00000399603 FAM200AQ8TCP9 573 aa13.89□□□□□ -0.19
CACNA1C-209ENST00000399603 NACA2Q9H009 215 aa13.89□□□□□ -0.19
CACNA1C-209ENST00000399603 SPATA17Q96L03 361 aa13.89□□□□□ -0.19
CACNA1C-209ENST00000399603 NBPF3Q9H094 633 aa13.89□□□□□ -0.19
CACNA1C-209ENST00000399603 TNNQ9UQP3 1299 aa13.89□□□□□ -0.19
CACNA1C-209ENST00000399603 SCINQ9Y6U3 715 aa13.89□□□□□ -0.19
CACNA1C-209ENST00000399603 LONRF3Q496Y0 759 aa13.88□□□□□ -0.19
CACNA1C-209ENST00000399603 HS2ST1Q7LGA3 356 aa13.88□□□□□ -0.19
CACNA1C-209ENST00000399603 NSD2O96028 1365 aa13.88□□□□□ -0.19
CACNA1C-209ENST00000399603 MMEL1Q495T6 779 aa13.88□□□□□ -0.19
CACNA1C-209ENST00000399603 TMEM259Q4ZIN3 620 aa13.88□□□□□ -0.19
CACNA1C-209ENST00000399603 CTAGE3PQ8IX95 158 aa13.88□□□□□ -0.19
CACNA1C-209ENST00000399603 PPP4R1Q8TF05 950 aa13.88□□□□□ -0.19
CACNA1C-209ENST00000399603 ZKSCAN5Q9Y2L8 839 aa13.88□□□□□ -0.19
CACNA1C-209ENST00000399603 GTPBP10A4D1E9 387 aaKnown RBP13.88□□□□□ -0.19
CACNA1C-209ENST00000399603 EEF1B2P24534 225 aaKnown RBP13.88□□□□□ -0.19
CACNA1C-209ENST00000399603 TUBB4BP68371 445 aa13.88□□□□□ -0.19
CACNA1C-209ENST00000399603 NPR1P16066 1061 aa13.88□□□□□ -0.19
CACNA1C-209ENST00000399603 LRRC59Q96AG4 307 aaKnown RBP13.88□□□□□ -0.19
CACNA1C-209ENST00000399603 LRGUKQ96M69 825 aa13.88□□□□□ -0.19
CACNA1C-209ENST00000399603 PI4KAP2A4QPH2 592 aa13.88□□□□□ -0.19
CACNA1C-209ENST00000399603 SAT1P21673 171 aa13.88□□□□□ -0.19
CACNA1C-209ENST00000399603 SLC39A6Q13433 755 aa13.88□□□□□ -0.19
CACNA1C-209ENST00000399603 SLF2Q8IX21 1173 aa13.88□□□□□ -0.19
CACNA1C-209ENST00000399603 PI4KAP1Q8N8J0 262 aa13.88□□□□□ -0.19
CACNA1C-209ENST00000399603 CABLES1Q8TDN4 633 aa13.88□□□□□ -0.19
CACNA1C-209ENST00000399603 PEG3Q9GZU2 1588 aa13.88□□□□□ -0.19
CACNA1C-209ENST00000399603 GNGT2O14610 69 aa13.88□□□□□ -0.19
CACNA1C-209ENST00000399603 TNFAIP3P21580 790 aa13.88□□□□□ -0.19
CACNA1C-209ENST00000399603 STX2P32856 288 aa13.88□□□□□ -0.19
CACNA1C-209ENST00000399603 SH3BGRP55822 239 aaPredicted RBP13.88□□□□□ -0.19
CACNA1C-209ENST00000399603 RSBN1LQ6PCB5 846 aaPredicted RBP13.88□□□□□ -0.19
CACNA1C-209ENST00000399603 KLF18A0A0U1RQI7 1052 aa13.87□□□□□ -0.19
CACNA1C-209ENST00000399603 TROVE2P10155 538 aaKnown RBP eCLIP13.87□□□□□ -0.19
CACNA1C-209ENST00000399603 HSPA2P54652 639 aa13.87□□□□□ -0.19
CACNA1C-209ENST00000399603 IFT20Q8IY31 132 aa13.87□□□□□ -0.19
CACNA1C-209ENST00000399603 FNBP4Q8N3X1 1017 aaPredicted RBP13.87□□□□□ -0.19
CACNA1C-209ENST00000399603 PIP4K2CQ8TBX8 421 aa13.87□□□□□ -0.19
CACNA1C-209ENST00000399603 MRPS27Q92552 414 aaKnown RBP13.87□□□□□ -0.19
CACNA1C-209ENST00000399603 PLCB4Q15147 1175 aa13.87□□□□□ -0.19
CACNA1C-209ENST00000399603 LGSNQ5TDP6 509 aa13.87□□□□□ -0.19
CACNA1C-209ENST00000399603 C6orf50Q9HD87 102 aa13.87□□□□□ -0.19
CACNA1C-209ENST00000399603 GIMAP4Q9NUV9 329 aa13.87□□□□□ -0.19
CACNA1C-209ENST00000399603 HLA-DOAP06340 250 aa13.87□□□□□ -0.19
CACNA1C-209ENST00000399603 TSPY3P0CV98 308 aa13.87□□□□□ -0.19
CACNA1C-209ENST00000399603 TSPY8P0CW00 308 aa13.87□□□□□ -0.19
CACNA1C-209ENST00000399603 LIG3P49916 1009 aa13.87□□□□□ -0.19
CACNA1C-209ENST00000399603 NOP14P78316 857 aaKnown RBP13.87□□□□□ -0.19
CACNA1C-209ENST00000399603 DAB2P98082 770 aa13.87□□□□□ -0.19
CACNA1C-209ENST00000399603 NAP1L4Q99733 375 aaKnown RBP13.87□□□□□ -0.19
CACNA1C-209ENST00000399603 RNF40O75150 1001 aa13.87□□□□□ -0.19
CACNA1C-209ENST00000399603 OAS2P29728 719 aaKnown RBP13.87□□□□□ -0.19
CACNA1C-209ENST00000399603 GJC2Q5T442 439 aaPredicted RBP13.87□□□□□ -0.19
CACNA1C-209ENST00000399603 SCYL1Q96KG9 808 aa13.87□□□□□ -0.19
CACNA1C-209ENST00000399603 SPATS2Q86XZ4 545 aaKnown RBP13.87□□□□□ -0.19
CACNA1C-209ENST00000399603 NCOA7Q8NI08 942 aa13.87□□□□□ -0.19
CACNA1C-209ENST00000399603 TCEANC2Q96MN5 208 aa13.87□□□□□ -0.19
CACNA1C-209ENST00000399603 SLC4A7Q9Y6M7 1214 aa13.87□□□□□ -0.19
CACNA1C-209ENST00000399603 GFAPP14136 432 aa13.86□□□□□ -0.19
CACNA1C-209ENST00000399603 KLHL40Q2TBA0 621 aa13.86□□□□□ -0.19
CACNA1C-209ENST00000399603 RUFY4Q6ZNE9 571 aa13.86□□□□□ -0.19
CACNA1C-209ENST00000399603 CNGA4Q8IV77 575 aa13.86□□□□□ -0.19
CACNA1C-209ENST00000399603 PPWD1Q96BP3 646 aaKnown RBP13.86□□□□□ -0.19
CACNA1C-209ENST00000399603 NAPAP54920 295 aa13.86□□□□□ -0.19
CACNA1C-209ENST00000399603 NBPF6Q5VWK0 638 aa13.86□□□□□ -0.19
CACNA1C-209ENST00000399603 CAPN12Q6ZSI9 719 aa13.86□□□□□ -0.19
CACNA1C-209ENST00000399603 NLRP7Q8WX94 980 aa13.86□□□□□ -0.19
CACNA1C-209ENST00000399603 NBPF4Q96M43 638 aa13.86□□□□□ -0.19
CACNA1C-209ENST00000399603 RAD51AP2Q09MP3 1159 aa13.86□□□□□ -0.19
CACNA1C-209ENST00000399603 ZSCAN16Q9H4T2 348 aaPredicted RBP13.86□□□□□ -0.19
CACNA1C-209ENST00000399603 RTL1A6NKG5 1358 aa13.86□□□□□ -0.19
CACNA1C-209ENST00000399603 ZSCAN22P10073 491 aaPredicted RBP13.86□□□□□ -0.19
CACNA1C-209ENST00000399603 WTAPQ15007 396 aa13.86□□□□□ -0.19
CACNA1C-209ENST00000399603 WDR44Q5JSH3 913 aa13.86□□□□□ -0.19
CACNA1C-209ENST00000399603 SKA2Q8WVK7 121 aaPredicted RBP13.86□□□□□ -0.19
CACNA1C-209ENST00000399603 NR1H4Q96RI1 486 aaPredicted RBP13.86□□□□□ -0.19
CACNA1C-209ENST00000399603 PKD2L1Q9P0L9 805 aa13.86□□□□□ -0.19
CACNA1C-209ENST00000399603 IFIT1BQ5T764 474 aaKnown RBP13.86□□□□□ -0.19
CACNA1C-209ENST00000399603 USP6NLQ92738 828 aa13.86□□□□□ -0.19
CACNA1C-209ENST00000399603 CARD6Q9BX69 1037 aa13.86□□□□□ -0.19
CACNA1C-209ENST00000399603 SLC8A3P57103 927 aa13.85□□□□□ -0.19
CACNA1C-209ENST00000399603 ELF2Q15723 593 aa13.85□□□□□ -0.19
CACNA1C-209ENST00000399603 HSP90AA5PQ58FG0 334 aa13.85□□□□□ -0.19
CACNA1C-209ENST00000399603 MAN1A2O60476 641 aa13.85□□□□□ -0.19
CACNA1C-209ENST00000399603 PICALMQ13492 652 aa13.85□□□□□ -0.19
CACNA1C-209ENST00000399603 KCNG4Q8TDN1 519 aa13.85□□□□□ -0.19
CACNA1C-209ENST00000399603 FNBP1Q96RU3 617 aa13.85□□□□□ -0.19
CACNA1C-209ENST00000399603 NAPGQ99747 312 aaPredicted RBP13.85□□□□□ -0.19
CACNA1C-209ENST00000399603 ZNF652Q9Y2D9 606 aa13.85□□□□□ -0.19
CACNA1C-209ENST00000399603 RIMS2Q9UQ26 1411 aa13.85□□□□□ -0.19
CACNA1C-209ENST00000399603 EIF4A2Q14240 407 aaKnown RBP13.85□□□□□ -0.19
CACNA1C-209ENST00000399603 KRT71Q3SY84 523 aa13.85□□□□□ -0.19
CACNA1C-209ENST00000399603 KMT5BQ4FZB7 885 aa13.85□□□□□ -0.19
CACNA1C-209ENST00000399603 CWF19L2Q2TBE0 894 aaKnown RBP13.85□□□□□ -0.19
CACNA1C-209ENST00000399603 KIFAP3Q92845 792 aa13.85□□□□□ -0.19
CACNA1C-209ENST00000399603 CTTNBP2NLQ9P2B4 639 aa13.85□□□□□ -0.19
CACNA1C-209ENST00000399603 SLC12A1Q13621 1099 aa13.85□□□□□ -0.19
CACNA1C-209ENST00000399603 FAM186BQ8IYM0 893 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms