RNA–Protein interactions for RNA: ENST00000399451.6

ANKRD28-201, Transcript of ankyrin repeat domain 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ANKRD28, Length 6,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-201ENST00000399451 NPC1L1Q9UHC9 1359 aa23.93■■□□□ 1.42
ANKRD28-201ENST00000399451 U2AF2P26368 475 aaKnown RBP eCLIP23.93■■□□□ 1.425e-8■■■□□ 19.2
ANKRD28-201ENST00000399451 GPR162Q16538 588 aa23.93■■□□□ 1.42
ANKRD28-201ENST00000399451 DBNDD2Q9BQY9 259 aa23.93■■□□□ 1.42
ANKRD28-201ENST00000399451 PAK1Q13153 545 aa23.93■■□□□ 1.42
ANKRD28-201ENST00000399451 WDR44Q5JSH3 913 aa23.93■■□□□ 1.42
ANKRD28-201ENST00000399451 RNF34Q969K3 372 aa23.93■■□□□ 1.42
ANKRD28-201ENST00000399451 PDE6BP35913 854 aa23.93■■□□□ 1.42
ANKRD28-201ENST00000399451 TRIM6Q9C030 488 aaPredicted RBP23.93■■□□□ 1.42
ANKRD28-201ENST00000399451 RIOK3O14730 519 aaKnown RBP23.92■■□□□ 1.42
ANKRD28-201ENST00000399451 POLR2DO15514 142 aaKnown RBP23.92■■□□□ 1.42
ANKRD28-201ENST00000399451 CCNT1O60563 726 aaKnown RBP23.92■■□□□ 1.42
ANKRD28-201ENST00000399451 ATP5DP30049 168 aa23.92■■□□□ 1.42
ANKRD28-201ENST00000399451 SLC8A3P57103 927 aa23.92■■□□□ 1.42
ANKRD28-201ENST00000399451 MLKLQ8NB16 471 aa23.92■■□□□ 1.42
ANKRD28-201ENST00000399451 ZBED4O75132 1171 aa23.92■■□□□ 1.42
ANKRD28-201ENST00000399451 KIFAP3Q92845 792 aa23.92■■□□□ 1.42
ANKRD28-201ENST00000399451 SEC62Q99442 399 aaKnown RBP23.92■■□□□ 1.42
ANKRD28-201ENST00000399451 TXNDC16Q9P2K2 825 aa23.92■■□□□ 1.42
ANKRD28-201ENST00000399451 SMTNP53814 917 aa23.91■■□□□ 1.42
ANKRD28-201ENST00000399451 C8orf74Q6P047 294 aa23.91■■□□□ 1.42
ANKRD28-201ENST00000399451 CCDC24Q8N4L8 307 aa23.91■■□□□ 1.42
ANKRD28-201ENST00000399451 NUP58Q9BVL2 599 aa23.91■■□□□ 1.42
ANKRD28-201ENST00000399451 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.91■■□□□ 1.42
ANKRD28-201ENST00000399451 CALUO43852 315 aaPredicted RBP23.91■■□□□ 1.42
ANKRD28-201ENST00000399451 ASIC2Q16515 512 aa23.91■■□□□ 1.42
ANKRD28-201ENST00000399451 IFT74Q96LB3 600 aa23.91■■□□□ 1.42
ANKRD28-201ENST00000399451 SBNO1A3KN83 1393 aa23.91■■□□□ 1.42
ANKRD28-201ENST00000399451 EDC4Q6P2E9 1401 aaKnown RBP23.91■■□□□ 1.42
ANKRD28-201ENST00000399451 SNX16P57768 344 aa23.91■■□□□ 1.42
ANKRD28-201ENST00000399451 STRN3Q13033 797 aa23.9■■□□□ 1.42
ANKRD28-201ENST00000399451 GPAA1O43292 621 aa23.9■■□□□ 1.42
ANKRD28-201ENST00000399451 LPXNO60711 386 aa23.9■■□□□ 1.42
ANKRD28-201ENST00000399451 TNFAIP3P21580 790 aa23.9■■□□□ 1.42
ANKRD28-201ENST00000399451 ZNF790Q6PG37 636 aa23.9■■□□□ 1.42
ANKRD28-201ENST00000399451 CSGALNACT2Q8N6G5 542 aa23.9■■□□□ 1.42
ANKRD28-201ENST00000399451 KIAA1524Q8TCG1 905 aa23.9■■□□□ 1.42
ANKRD28-201ENST00000399451 ALDH3A1P30838 453 aa23.9■■□□□ 1.42
ANKRD28-201ENST00000399451 TTC38Q5R3I4 469 aa23.9■■□□□ 1.42
ANKRD28-201ENST00000399451 ZNF202O95125 648 aa23.9■■□□□ 1.42
ANKRD28-201ENST00000399451 GAS8O95995 478 aa23.9■■□□□ 1.42
ANKRD28-201ENST00000399451 TRIM35Q9UPQ4 493 aa23.9■■□□□ 1.42
ANKRD28-201ENST00000399451 TCP10Q12799 353 aa23.89■■□□□ 1.42
ANKRD28-201ENST00000399451 SPOUT1Q5T280 376 aaKnown RBP23.89■■□□□ 1.42
ANKRD28-201ENST00000399451 KRBA2Q6ZNG9 492 aa23.89■■□□□ 1.42
ANKRD28-201ENST00000399451 DIS3L2Q8IYB7 885 aaKnown RBP23.89■■□□□ 1.42
ANKRD28-201ENST00000399451 V9GY48 417 aaPredicted RBP23.89■■□□□ 1.42
ANKRD28-201ENST00000399451 NKIRAS1Q9NYS0 192 aa23.89■■□□□ 1.42
ANKRD28-201ENST00000399451 KIAA0556O60303 1618 aa23.89■■□□□ 1.42
ANKRD28-201ENST00000399451 HAUS3Q68CZ6 603 aa23.89■■□□□ 1.42
ANKRD28-201ENST00000399451 WDR66Q8TBY9 1149 aa23.89■■□□□ 1.42
ANKRD28-201ENST00000399451 FAM169AQ9Y6X4 670 aa23.89■■□□□ 1.42
ANKRD28-201ENST00000399451 ODF2LQ9ULJ1 636 aa23.89■■□□□ 1.41
ANKRD28-201ENST00000399451 GPR161Q8N6U8 529 aaKnown RBP23.89■■□□□ 1.41
ANKRD28-201ENST00000399451 USP19O94966 1318 aa23.89■■□□□ 1.41
ANKRD28-201ENST00000399451 ABCC10Q5T3U5 1492 aa23.89■■□□□ 1.41
ANKRD28-201ENST00000399451 SH3BP5O60239 455 aa23.88■■□□□ 1.41
ANKRD28-201ENST00000399451 GADD45BO75293 160 aaPredicted RBP23.88■■□□□ 1.41
ANKRD28-201ENST00000399451 CEP128Q6ZU80 1094 aa23.88■■□□□ 1.41
ANKRD28-201ENST00000399451 SECISBP2LQ93073 1101 aaKnown RBP23.88■■□□□ 1.41
ANKRD28-201ENST00000399451 SMAP1Q8IYB5 467 aaPredicted RBP23.88■■□□□ 1.41
ANKRD28-201ENST00000399451 RRAGDQ9NQL2 400 aaPredicted RBP23.88■■□□□ 1.41
ANKRD28-201ENST00000399451 AATFQ9NY61 560 aaKnown RBP eCLIP23.88■■□□□ 1.417e-7■■■□□ 18.9
ANKRD28-201ENST00000399451 ANAPC4Q9UJX5 808 aa23.88■■□□□ 1.41
ANKRD28-201ENST00000399451 WDR62O43379 1518 aa23.88■■□□□ 1.41
ANKRD28-201ENST00000399451 DDX39AO00148 427 aaKnown RBP23.88■■□□□ 1.41
ANKRD28-201ENST00000399451 IGSF3O75054 1194 aa23.88■■□□□ 1.41
ANKRD28-201ENST00000399451 MAP7D1Q3KQU3 841 aa23.88■■□□□ 1.41
ANKRD28-201ENST00000399451 CCDC14Q49A88 953 aa23.88■■□□□ 1.41
ANKRD28-201ENST00000399451 FAM173BQ6P4H8 233 aa23.88■■□□□ 1.41
ANKRD28-201ENST00000399451 CSRNP2Q9H175 543 aa23.88■■□□□ 1.41
ANKRD28-201ENST00000399451 CDC37L1Q7L3B6 337 aa23.88■■□□□ 1.41
ANKRD28-201ENST00000399451 CARD6Q9BX69 1037 aa23.88■■□□□ 1.41
ANKRD28-201ENST00000399451 SPOPO43791 374 aa23.88■■□□□ 1.41
ANKRD28-201ENST00000399451 KLHDC4Q8TBB5 520 aa23.88■■□□□ 1.41
ANKRD28-201ENST00000399451 NOX5Q96PH1 765 aa23.88■■□□□ 1.41
ANKRD28-201ENST00000399451 CCDC160A6NGH7 325 aa23.88■■□□□ 1.41
ANKRD28-201ENST00000399451 CHL1O00533 1208 aa23.88■■□□□ 1.41
ANKRD28-201ENST00000399451 TRIM7Q9C029 511 aa23.88■■□□□ 1.41
ANKRD28-201ENST00000399451 UTP11Q9Y3A2 253 aaKnown RBP23.88■■□□□ 1.41
ANKRD28-201ENST00000399451 MAST1Q9Y2H9 1570 aa23.87■■□□□ 1.41
ANKRD28-201ENST00000399451 M0QZ92 97 aa23.87■■□□□ 1.41
ANKRD28-201ENST00000399451 LMBRD1Q9NUN5 540 aa23.87■■□□□ 1.41
ANKRD28-201ENST00000399451 STX10O60499 249 aa23.87■■□□□ 1.41
ANKRD28-201ENST00000399451 UTP14CQ5TAP6 766 aaKnown RBP23.87■■□□□ 1.41
ANKRD28-201ENST00000399451 MYRIPQ8NFW9 859 aa23.87■■□□□ 1.41
ANKRD28-201ENST00000399451 TRPC3Q13507 836 aa23.87■■□□□ 1.41
ANKRD28-201ENST00000399451 B4GALNT4Q76KP1 1039 aa23.87■■□□□ 1.41
ANKRD28-201ENST00000399451 C10orf67Q8IYJ2 551 aa23.87■■□□□ 1.41
ANKRD28-201ENST00000399451 KBTBD3Q8NAB2 608 aa23.87■■□□□ 1.41
ANKRD28-201ENST00000399451 IRX3P78415 501 aaPredicted RBP23.87■■□□□ 1.41
ANKRD28-201ENST00000399451 MAPK8IP1Q9UQF2 711 aa23.87■■□□□ 1.41
ANKRD28-201ENST00000399451 H7C1D1 291 aa23.87■■□□□ 1.41
ANKRD28-201ENST00000399451 INTS8Q75QN2 995 aaKnown RBP23.87■■□□□ 1.41
ANKRD28-201ENST00000399451 DAAM2Q86T65 1068 aa23.87■■□□□ 1.41
ANKRD28-201ENST00000399451 CPXCR1Q8N123 301 aa23.87■■□□□ 1.41
ANKRD28-201ENST00000399451 SUCLG2Q96I99 432 aa23.86■■□□□ 1.41
ANKRD28-201ENST00000399451 ALDH1B1P30837 517 aa23.86■■□□□ 1.41
ANKRD28-201ENST00000399451 TMTC1Q8IUR5 882 aa23.86■■□□□ 1.41
ANKRD28-201ENST00000399451 IFT20Q8IY31 132 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms