RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 RGPD8O14715 1765 aaPredicted RBP7.29□□□□□ -1.24
TRAPPC13-202ENST00000399438 CCDC85CA6NKD9 419 aa7.29□□□□□ -1.24
TRAPPC13-202ENST00000399438 PPFIA3O75145 1194 aa7.29□□□□□ -1.24
TRAPPC13-202ENST00000399438 NPR3P17342 541 aa7.29□□□□□ -1.24
TRAPPC13-202ENST00000399438 FAM133BQ5BKY9 247 aaKnown RBP7.29□□□□□ -1.24
TRAPPC13-202ENST00000399438 HNRNPLLQ8WVV9 542 aaKnown RBP7.29□□□□□ -1.24
TRAPPC13-202ENST00000399438 ATRIPQ8WXE1 791 aa7.29□□□□□ -1.24
TRAPPC13-202ENST00000399438 ZNF496Q96IT1 587 aaPredicted RBP7.29□□□□□ -1.24
TRAPPC13-202ENST00000399438 PANK2Q9BZ23 570 aa7.29□□□□□ -1.24
TRAPPC13-202ENST00000399438 CHMP3Q9Y3E7 222 aa7.29□□□□□ -1.24
TRAPPC13-202ENST00000399438 AKAP12Q02952 1782 aa7.28□□□□□ -1.24
TRAPPC13-202ENST00000399438 PMLP29590 882 aa7.28□□□□□ -1.24
TRAPPC13-202ENST00000399438 DSG3P32926 999 aa7.28□□□□□ -1.24
TRAPPC13-202ENST00000399438 NUCB1Q02818 461 aa7.28□□□□□ -1.24
TRAPPC13-202ENST00000399438 DNAJC21Q5F1R6 531 aaKnown RBP7.28□□□□□ -1.24
TRAPPC13-202ENST00000399438 KIAA1614Q5VZ46 1190 aa7.28□□□□□ -1.24
TRAPPC13-202ENST00000399438 LMBRD2Q68DH5 695 aaPredicted RBP7.28□□□□□ -1.24
TRAPPC13-202ENST00000399438 THNSL2Q86YJ6 484 aa7.28□□□□□ -1.24
TRAPPC13-202ENST00000399438 OGFOD1Q8N543 542 aa7.28□□□□□ -1.24
TRAPPC13-202ENST00000399438 NKAIN3Q8N8D7 197 aa7.28□□□□□ -1.24
TRAPPC13-202ENST00000399438 RTFDC1Q9BY42 306 aaPredicted RBP7.28□□□□□ -1.24
TRAPPC13-202ENST00000399438 C19orf44Q9H6X5 657 aa7.28□□□□□ -1.24
TRAPPC13-202ENST00000399438 PRDM4Q9UKN5 801 aa7.28□□□□□ -1.24
TRAPPC13-202ENST00000399438 CHL1O00533 1208 aa7.28□□□□□ -1.24
TRAPPC13-202ENST00000399438 NCAM1P13591 858 aa7.28□□□□□ -1.24
TRAPPC13-202ENST00000399438 GSPT1P15170 499 aaKnown RBP7.28□□□□□ -1.24
TRAPPC13-202ENST00000399438 ESCO1Q5FWF5 840 aa7.28□□□□□ -1.24
TRAPPC13-202ENST00000399438 PLPP6Q8IY26 295 aa7.28□□□□□ -1.24
TRAPPC13-202ENST00000399438 EYA1Q99502 592 aa7.28□□□□□ -1.24
TRAPPC13-202ENST00000399438 MKNK1Q9BUB5 465 aa7.28□□□□□ -1.24
TRAPPC13-202ENST00000399438 ZBTB3Q9H5J0 574 aa7.28□□□□□ -1.24
TRAPPC13-202ENST00000399438 ZNF652Q9Y2D9 606 aa7.28□□□□□ -1.24
TRAPPC13-202ENST00000399438 MSH6P52701 1360 aa7.28□□□□□ -1.24
TRAPPC13-202ENST00000399438 MST1RQ04912 1400 aa7.28□□□□□ -1.24
TRAPPC13-202ENST00000399438 MON2Q7Z3U7 1717 aa7.28□□□□□ -1.24
TRAPPC13-202ENST00000399438 SNX2O60749 519 aa7.27□□□□□ -1.24
TRAPPC13-202ENST00000399438 IFIT2P09913 472 aaKnown RBP7.27□□□□□ -1.24
TRAPPC13-202ENST00000399438 PLCB3Q01970 1234 aa7.27□□□□□ -1.24
TRAPPC13-202ENST00000399438 ERFEQ4G0M1 354 aa7.27□□□□□ -1.24
TRAPPC13-202ENST00000399438 IFNL2Q8IZJ0 200 aa7.27□□□□□ -1.24
TRAPPC13-202ENST00000399438 ABTB2Q8N961 1025 aa7.27□□□□□ -1.24
TRAPPC13-202ENST00000399438 DDX17Q92841 729 aaKnown RBP7.27□□□□□ -1.24
TRAPPC13-202ENST00000399438 LRRC59Q96AG4 307 aaKnown RBP7.27□□□□□ -1.24
TRAPPC13-202ENST00000399438 FMNL2Q96PY5 1086 aa7.27□□□□□ -1.24
TRAPPC13-202ENST00000399438 TRIM55Q9BYV6 548 aa7.27□□□□□ -1.24
TRAPPC13-202ENST00000399438 SAGE1Q9NXZ1 904 aa7.27□□□□□ -1.24
TRAPPC13-202ENST00000399438 MSRB2Q9Y3D2 182 aa7.27□□□□□ -1.24
TRAPPC13-202ENST00000399438 PNPLA6Q8IY17 1366 aa7.27□□□□□ -1.25
TRAPPC13-202ENST00000399438 KIF1AQ12756 1690 aa7.27□□□□□ -1.25
TRAPPC13-202ENST00000399438 MAP2K1Q02750 393 aaPredicted RBP7.27□□□□□ -1.25
TRAPPC13-202ENST00000399438 DGKHQ86XP1 1220 aa7.27□□□□□ -1.25
TRAPPC13-202ENST00000399438 APPL2Q8NEU8 664 aa7.27□□□□□ -1.25
TRAPPC13-202ENST00000399438 RTF1Q92541 710 aaKnown RBP7.27□□□□□ -1.25
TRAPPC13-202ENST00000399438 NRKQ7Z2Y5 1582 aa7.27□□□□□ -1.25
TRAPPC13-202ENST00000399438 ALG1L2C9J202 215 aa7.27□□□□□ -1.25
TRAPPC13-202ENST00000399438 GPR182O15218 404 aa7.27□□□□□ -1.25
TRAPPC13-202ENST00000399438 KCNQ3O43525 872 aa7.27□□□□□ -1.25
TRAPPC13-202ENST00000399438 BAIAP3O94812 1187 aa7.27□□□□□ -1.25
TRAPPC13-202ENST00000399438 RASGRP1O95267 797 aa7.27□□□□□ -1.25
TRAPPC13-202ENST00000399438 GLULP15104 373 aa7.27□□□□□ -1.25
TRAPPC13-202ENST00000399438 TNFAIP3P21580 790 aa7.27□□□□□ -1.25
TRAPPC13-202ENST00000399438 NR1H3Q13133 447 aa7.27□□□□□ -1.25
TRAPPC13-202ENST00000399438 E2F5Q15329 346 aa7.27□□□□□ -1.25
TRAPPC13-202ENST00000399438 NR6A1Q15406 480 aa7.27□□□□□ -1.25
TRAPPC13-202ENST00000399438 CDH19Q9H159 772 aa7.27□□□□□ -1.25
TRAPPC13-202ENST00000399438 ANTXR1Q9H6X2 564 aa7.27□□□□□ -1.25
TRAPPC13-202ENST00000399438 IL1RAPL2Q9NP60 686 aa7.27□□□□□ -1.25
TRAPPC13-202ENST00000399438 FAM13BQ9NYF5 915 aa7.27□□□□□ -1.25
TRAPPC13-202ENST00000399438 MRVI1Q9Y6F6 885 aa7.27□□□□□ -1.25
TRAPPC13-202ENST00000399438 USP31Q70CQ4 1352 aa7.27□□□□□ -1.25
TRAPPC13-202ENST00000399438 CPSF1Q10570 1443 aaKnown RBP7.27□□□□□ -1.25
TRAPPC13-202ENST00000399438 C1orf167Q5SNV9 1468 aa7.27□□□□□ -1.25
TRAPPC13-202ENST00000399438 C19orf81C9J6K1 198 aa7.26□□□□□ -1.25
TRAPPC13-202ENST00000399438 ZBTB24O43167 697 aaPredicted RBP7.26□□□□□ -1.25
TRAPPC13-202ENST00000399438 NBNO60934 754 aa7.26□□□□□ -1.25
TRAPPC13-202ENST00000399438 OAS2P29728 719 aaKnown RBP7.26□□□□□ -1.25
TRAPPC13-202ENST00000399438 CNGA1P29973 690 aa7.26□□□□□ -1.25
TRAPPC13-202ENST00000399438 PIP4K2AP48426 406 aaPredicted RBP7.26□□□□□ -1.25
TRAPPC13-202ENST00000399438 PPM1FP49593 454 aaPredicted RBP7.26□□□□□ -1.25
TRAPPC13-202ENST00000399438 FKBP5Q13451 457 aaPredicted RBP7.26□□□□□ -1.25
TRAPPC13-202ENST00000399438 PUM3Q15397 648 aaKnown RBP7.26□□□□□ -1.25
TRAPPC13-202ENST00000399438 TCEAL8Q8IYN2 117 aa7.26□□□□□ -1.25
TRAPPC13-202ENST00000399438 ZSWIM6Q9HCJ5 1215 aa7.26□□□□□ -1.25
TRAPPC13-202ENST00000399438 SSR1P43307 286 aaKnown RBP7.26□□□□□ -1.25
TRAPPC13-202ENST00000399438 ZNF132P52740 706 aa7.26□□□□□ -1.25
TRAPPC13-202ENST00000399438 MMS22LQ6ZRQ5 1243 aa7.26□□□□□ -1.25
TRAPPC13-202ENST00000399438 HS2ST1Q7LGA3 356 aa7.26□□□□□ -1.25
TRAPPC13-202ENST00000399438 CATIPQ7Z7H3 387 aa7.26□□□□□ -1.25
TRAPPC13-202ENST00000399438 NUTM1Q86Y26 1132 aa7.26□□□□□ -1.25
TRAPPC13-202ENST00000399438 SRRTQ9BXP5 876 aaKnown RBP7.26□□□□□ -1.25
TRAPPC13-202ENST00000399438 PNNQ9H307 717 aaKnown RBP7.26□□□□□ -1.25
TRAPPC13-202ENST00000399438 KIAA1024Q9UPX6 916 aa7.26□□□□□ -1.25
TRAPPC13-202ENST00000399438 SSBP05455 408 aaKnown RBP eCLIP7.25□□□□□ -1.25
TRAPPC13-202ENST00000399438 PSMA3P25788 255 aa7.25□□□□□ -1.25
TRAPPC13-202ENST00000399438 EN1Q05925 392 aaPredicted RBP7.25□□□□□ -1.25
TRAPPC13-202ENST00000399438 PKP1Q13835 747 aa7.25□□□□□ -1.25
TRAPPC13-202ENST00000399438 HSP90AA2PQ14568 343 aaPredicted RBP7.25□□□□□ -1.25
TRAPPC13-202ENST00000399438 NXNQ6DKJ4 435 aa7.25□□□□□ -1.25
TRAPPC13-202ENST00000399438 DDX54Q8TDD1 881 aaKnown RBP7.25□□□□□ -1.25
TRAPPC13-202ENST00000399438 PURBQ96QR8 312 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms