RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 CDKL5O76039 1030 aa15.97■□□□□ 0.15
APOB-202ENST00000399256 CHRNA2Q15822 529 aa15.97■□□□□ 0.15
APOB-202ENST00000399256 RAD9BQ6WBX8 426 aa15.97■□□□□ 0.15
APOB-202ENST00000399256 XAGE2Q96GT9 111 aa15.97■□□□□ 0.15
APOB-202ENST00000399256 AKR1B15C9JRZ8 316 aaPredicted RBP15.97■□□□□ 0.15
APOB-202ENST00000399256 TEX33O43247 280 aa15.97■□□□□ 0.15
APOB-202ENST00000399256 RANBP6O60518 1105 aaKnown RBP15.97■□□□□ 0.15
APOB-202ENST00000399256 APOA5Q6Q788 366 aa15.97■□□□□ 0.15
APOB-202ENST00000399256 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.97■□□□□ 0.15
APOB-202ENST00000399256 SH2B2O14492 632 aaPredicted RBP15.96■□□□□ 0.15
APOB-202ENST00000399256 ZFYP08048 801 aaPredicted RBP15.96■□□□□ 0.15
APOB-202ENST00000399256 ACTN2P35609 894 aa15.96■□□□□ 0.15
APOB-202ENST00000399256 IARSP41252 1262 aaKnown RBP15.96■□□□□ 0.15
APOB-202ENST00000399256 BEND6Q5SZJ8 279 aaPredicted RBP15.96■□□□□ 0.15
APOB-202ENST00000399256 CPLX2Q6PUV4 134 aaKnown RBP15.96■□□□□ 0.15
APOB-202ENST00000399256 NFXL1Q6ZNB6 911 aa15.96■□□□□ 0.15
APOB-202ENST00000399256 ENOX1Q8TC92 643 aaKnown RBP15.96■□□□□ 0.15
APOB-202ENST00000399256 PSD3Q9NYI0 1048 aa15.96■□□□□ 0.15
APOB-202ENST00000399256 HOOK1Q9UJC3 728 aaKnown RBP15.96■□□□□ 0.15
APOB-202ENST00000399256 RHOXF2BP0C7M4 288 aa15.96■□□□□ 0.14
APOB-202ENST00000399256 TATP17735 454 aaPredicted RBP15.96■□□□□ 0.14
APOB-202ENST00000399256 ZNF569Q5MCW4 686 aa15.96■□□□□ 0.14
APOB-202ENST00000399256 RHOXF2Q9BQY4 288 aa15.96■□□□□ 0.14
APOB-202ENST00000399256 ZBTB3Q9H5J0 574 aa15.96■□□□□ 0.14
APOB-202ENST00000399256 SEC31BQ9NQW1 1179 aa15.96■□□□□ 0.14
APOB-202ENST00000399256 RRP15Q9Y3B9 282 aaKnown RBP15.96■□□□□ 0.14
APOB-202ENST00000399256 ADGRG1Q9Y653 693 aa15.96■□□□□ 0.14
APOB-202ENST00000399256 B4E1Z4 1266 aa15.95■□□□□ 0.14
APOB-202ENST00000399256 APPP05067 770 aa15.95■□□□□ 0.14
APOB-202ENST00000399256 NR1I3Q14994 352 aa15.95■□□□□ 0.14
APOB-202ENST00000399256 SLC9C2Q5TAH2 1124 aa15.95■□□□□ 0.14
APOB-202ENST00000399256 SRLQ86TD4 932 aa15.95■□□□□ 0.14
APOB-202ENST00000399256 NUTM2AQ8IVF1 878 aaPredicted RBP15.95■□□□□ 0.14
APOB-202ENST00000399256 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.95■□□□□ 0.14
APOB-202ENST00000399256 SLC26A6Q9BXS9 759 aa15.95■□□□□ 0.14
APOB-202ENST00000399256 ABCB6Q9NP58 842 aa15.95■□□□□ 0.14
APOB-202ENST00000399256 NBPF26B4DH59 902 aa15.95■□□□□ 0.14
APOB-202ENST00000399256 KIF5CO60282 957 aa15.95■□□□□ 0.14
APOB-202ENST00000399256 RBL2Q08999 1139 aa15.95■□□□□ 0.14
APOB-202ENST00000399256 NBPF14Q5TI25 921 aa15.95■□□□□ 0.14
APOB-202ENST00000399256 NBPF10Q6P3W6 841 aaKnown RBP15.95■□□□□ 0.14
APOB-202ENST00000399256 LEKR1Q6ZMV7 388 aa15.95■□□□□ 0.14
APOB-202ENST00000399256 HDXQ7Z353 690 aa15.95■□□□□ 0.14
APOB-202ENST00000399256 NBPF15Q8N660 670 aa15.95■□□□□ 0.14
APOB-202ENST00000399256 MLKLQ8NB16 471 aa15.95■□□□□ 0.14
APOB-202ENST00000399256 CDC23Q9UJX2 597 aa15.95■□□□□ 0.14
APOB-202ENST00000399256 UBN2Q6ZU65 1347 aa15.95■□□□□ 0.14
APOB-202ENST00000399256 SCN11AQ9UI33 1791 aa15.95■□□□□ 0.14
APOB-202ENST00000399256 GOLGA8AA7E2F4 631 aa15.94■□□□□ 0.14
APOB-202ENST00000399256 MORC3Q14149 939 aa15.94■□□□□ 0.14
APOB-202ENST00000399256 KIF4BQ2VIQ3 1234 aa15.94■□□□□ 0.14
APOB-202ENST00000399256 DACH1Q9UI36 760 aa15.94■□□□□ 0.14
APOB-202ENST00000399256 FAN1Q9Y2M0 1017 aa15.94■□□□□ 0.14
APOB-202ENST00000399256 COL22A1Q8NFW1 1626 aaPredicted RBP15.94■□□□□ 0.14
APOB-202ENST00000399256 PHLPP1O60346 1717 aa15.94■□□□□ 0.14
APOB-202ENST00000399256 BTBD18B2RXH4 712 aa15.94■□□□□ 0.14
APOB-202ENST00000399256 ZBTB43O43298 467 aa15.94■□□□□ 0.14
APOB-202ENST00000399256 KLHL10Q6JEL2 608 aa15.94■□□□□ 0.14
APOB-202ENST00000399256 IFNL2Q8IZJ0 200 aa15.94■□□□□ 0.14
APOB-202ENST00000399256 INCENPQ9NQS7 918 aa15.94■□□□□ 0.14
APOB-202ENST00000399256 WDR19Q8NEZ3 1342 aa15.94■□□□□ 0.14
APOB-202ENST00000399256 COL16A1Q07092 1604 aaPredicted RBP15.94■□□□□ 0.14
APOB-202ENST00000399256 ATP2B1P20020 1258 aa15.94■□□□□ 0.14
APOB-202ENST00000399256 STX17P56962 302 aa15.94■□□□□ 0.14
APOB-202ENST00000399256 FOXR1Q6PIV2 292 aa15.94■□□□□ 0.14
APOB-202ENST00000399256 PPFIBP1Q86W92 1011 aa15.94■□□□□ 0.14
APOB-202ENST00000399256 CEP112Q8N8E3 955 aa15.94■□□□□ 0.14
APOB-202ENST00000399256 IGSF22Q8N9C0 903 aa15.94■□□□□ 0.14
APOB-202ENST00000399256 CIAO1O76071 339 aa15.93■□□□□ 0.14
APOB-202ENST00000399256 NTRK3Q16288 839 aa15.93■□□□□ 0.14
APOB-202ENST00000399256 PANX2Q96RD6 677 aa15.93■□□□□ 0.14
APOB-202ENST00000399256 ATG3Q9NT62 314 aa15.93■□□□□ 0.14
APOB-202ENST00000399256 KCNJ14Q9UNX9 436 aa15.93■□□□□ 0.14
APOB-202ENST00000399256 DDX60Q8IY21 1712 aaKnown RBP15.93■□□□□ 0.14
APOB-202ENST00000399256 SPEF2Q9C093 1822 aa15.93■□□□□ 0.14
APOB-202ENST00000399256 A0A1B0GTH6 734 aa15.93■□□□□ 0.14
APOB-202ENST00000399256 TOM1O60784 492 aa15.93■□□□□ 0.14
APOB-202ENST00000399256 PHACTR2O75167 634 aa15.93■□□□□ 0.14
APOB-202ENST00000399256 TOB1P50616 345 aaPredicted RBP15.93■□□□□ 0.14
APOB-202ENST00000399256 NOSTRINQ8IVI9 506 aa15.93■□□□□ 0.14
APOB-202ENST00000399256 HNRNPLLQ8WVV9 542 aaKnown RBP15.93■□□□□ 0.14
APOB-202ENST00000399256 FBXO2Q9UK22 296 aaPredicted RBP15.93■□□□□ 0.14
APOB-202ENST00000399256 GUCY1A2P33402 732 aa15.92■□□□□ 0.14
APOB-202ENST00000399256 SARSP49591 514 aaKnown RBP15.92■□□□□ 0.14
APOB-202ENST00000399256 SLC35F6Q8N357 371 aa15.92■□□□□ 0.14
APOB-202ENST00000399256 CDC5LQ99459 802 aaKnown RBP15.92■□□□□ 0.14
APOB-202ENST00000399256 PRDM11Q9NQV5 511 aa15.92■□□□□ 0.14
APOB-202ENST00000399256 FAM217BQ9NTX9 383 aaPredicted RBP15.92■□□□□ 0.14
APOB-202ENST00000399256 ERLIN1O75477 346 aa15.92■□□□□ 0.14
APOB-202ENST00000399256 ABL1P00519 1130 aa15.92■□□□□ 0.14
APOB-202ENST00000399256 PLCD1P51178 756 aa15.92■□□□□ 0.14
APOB-202ENST00000399256 CABP4P57796 275 aa15.92■□□□□ 0.14
APOB-202ENST00000399256 VSNL1P62760 191 aa15.92■□□□□ 0.14
APOB-202ENST00000399256 USP49Q70CQ1 688 aa15.92■□□□□ 0.14
APOB-202ENST00000399256 MSANTD4Q8NCY6 345 aa15.92■□□□□ 0.14
APOB-202ENST00000399256 RAB21Q9UL25 225 aa15.92■□□□□ 0.14
APOB-202ENST00000399256 MEGF6O75095 1541 aa15.92■□□□□ 0.14
APOB-202ENST00000399256 EIF3JO75822 258 aaKnown RBP15.92■□□□□ 0.14
APOB-202ENST00000399256 CCDC57Q2TAC2 916 aa15.92■□□□□ 0.14
APOB-202ENST00000399256 TMEM67Q5HYA8 995 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms