RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 PLCD4Q9BRC7 762 aa17.7■□□□□ 0.42
COL25A1-201ENST00000399126 COA1Q9GZY4 146 aa17.7■□□□□ 0.42
COL25A1-201ENST00000399126 DBNDD1Q9H9R9 158 aa17.7■□□□□ 0.42
COL25A1-201ENST00000399126 ATP8A2Q9NTI2 1148 aa17.7■□□□□ 0.42
COL25A1-201ENST00000399126 MKRN1Q9UHC7 482 aaKnown RBP17.7■□□□□ 0.42
COL25A1-201ENST00000399126 RANBP6O60518 1105 aaKnown RBP17.7■□□□□ 0.42
COL25A1-201ENST00000399126 HMGN5P82970 282 aaKnown RBP17.7■□□□□ 0.42
COL25A1-201ENST00000399126 SGMS1Q86VZ5 419 aa17.7■□□□□ 0.42
COL25A1-201ENST00000399126 FAM205AQ6ZU69 1335 aa17.69■□□□□ 0.42
COL25A1-201ENST00000399126 ADAMTSL1Q8N6G6 1762 aa17.69■□□□□ 0.42
COL25A1-201ENST00000399126 UBE2Q2LH0YL09 131 aa17.69■□□□□ 0.42
COL25A1-201ENST00000399126 CPLX1O14810 134 aa17.69■□□□□ 0.42
COL25A1-201ENST00000399126 ZBTB43O43298 467 aa17.69■□□□□ 0.42
COL25A1-201ENST00000399126 USP5P45974 858 aa17.69■□□□□ 0.42
COL25A1-201ENST00000399126 STYK1Q6J9G0 422 aa17.69■□□□□ 0.42
COL25A1-201ENST00000399126 FAM217BQ9NTX9 383 aaPredicted RBP17.69■□□□□ 0.42
COL25A1-201ENST00000399126 SCN9AQ15858 1988 aa17.69■□□□□ 0.42
COL25A1-201ENST00000399126 LIFRP42702 1097 aa17.69■□□□□ 0.42
COL25A1-201ENST00000399126 GSTO1P78417 241 aa17.69■□□□□ 0.42
COL25A1-201ENST00000399126 MAPKAPK5Q8IW41 473 aa17.69■□□□□ 0.42
COL25A1-201ENST00000399126 PHKBQ93100 1093 aa17.69■□□□□ 0.42
COL25A1-201ENST00000399126 AIFM3Q96NN9 605 aa17.69■□□□□ 0.42
COL25A1-201ENST00000399126 NAV1Q8NEY1 1877 aa17.69■□□□□ 0.42
COL25A1-201ENST00000399126 TNKSO95271 1327 aa17.69■□□□□ 0.42
COL25A1-201ENST00000399126 NMT2O60551 498 aa17.68■□□□□ 0.42
COL25A1-201ENST00000399126 RESTQ13127 1097 aa17.68■□□□□ 0.42
COL25A1-201ENST00000399126 WTAPQ15007 396 aa17.68■□□□□ 0.42
COL25A1-201ENST00000399126 ESR2Q92731 530 aa17.68■□□□□ 0.42
COL25A1-201ENST00000399126 DYNLL2Q96FJ2 89 aa17.68■□□□□ 0.42
COL25A1-201ENST00000399126 SAP30BPQ9UHR5 308 aaKnown RBP17.68■□□□□ 0.42
COL25A1-201ENST00000399126 ATP6V1DQ9Y5K8 247 aa17.68■□□□□ 0.42
COL25A1-201ENST00000399126 SLC12A7Q9Y666 1083 aa17.68■□□□□ 0.42
COL25A1-201ENST00000399126 ECM29Q5VYK3 1845 aa17.68■□□□□ 0.42
COL25A1-201ENST00000399126 CCDC69A6NI79 296 aa17.68■□□□□ 0.42
COL25A1-201ENST00000399126 FAM47AQ5JRC9 791 aa17.68■□□□□ 0.42
COL25A1-201ENST00000399126 TMX4Q9H1E5 349 aaPredicted RBP17.68■□□□□ 0.42
COL25A1-201ENST00000399126 TFIP11Q9UBB9 837 aaKnown RBP17.68■□□□□ 0.42
COL25A1-201ENST00000399126 ORC3Q9UBD5 711 aaPredicted RBP17.68■□□□□ 0.42
COL25A1-201ENST00000399126 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.68■□□□□ 0.42
COL25A1-201ENST00000399126 GOLGA8AA7E2F4 631 aa17.67■□□□□ 0.42
COL25A1-201ENST00000399126 PPP4CP60510 307 aa17.67■□□□□ 0.42
COL25A1-201ENST00000399126 UBAC1Q9BSL1 405 aa17.67■□□□□ 0.42
COL25A1-201ENST00000399126 TMEM63CQ9P1W3 806 aa17.67■□□□□ 0.42
COL25A1-201ENST00000399126 BAG3O95817 575 aa17.67■□□□□ 0.42
COL25A1-201ENST00000399126 FGRP09769 529 aa17.67■□□□□ 0.42
COL25A1-201ENST00000399126 SEC23AQ15436 765 aa17.67■□□□□ 0.42
COL25A1-201ENST00000399126 GAS2L3Q86XJ1 694 aa17.67■□□□□ 0.42
COL25A1-201ENST00000399126 CMTR1Q8N1G2 835 aaKnown RBP17.67■□□□□ 0.42
COL25A1-201ENST00000399126 ENAHQ8N8S7 591 aaPredicted RBP17.67■□□□□ 0.42
COL25A1-201ENST00000399126 TBC1D22AQ8WUA7 517 aa17.67■□□□□ 0.42
COL25A1-201ENST00000399126 ARPP21Q9UBL0 812 aaPredicted RBP17.67■□□□□ 0.42
COL25A1-201ENST00000399126 GPR75-ASB3A0A0A6YYF3 556 aa17.66■□□□□ 0.42
COL25A1-201ENST00000399126 TMEM87AQ8NBN3 555 aa17.66■□□□□ 0.42
COL25A1-201ENST00000399126 C7orf43Q8WVR3 580 aa17.66■□□□□ 0.42
COL25A1-201ENST00000399126 DHX16O60231 1041 aaKnown RBP17.66■□□□□ 0.42
COL25A1-201ENST00000399126 LDHCP07864 332 aa17.66■□□□□ 0.42
COL25A1-201ENST00000399126 SCNN1DP51172 638 aa17.66■□□□□ 0.42
COL25A1-201ENST00000399126 PLCD1P51178 756 aa17.66■□□□□ 0.42
COL25A1-201ENST00000399126 RHBDL3P58872 404 aa17.66■□□□□ 0.42
COL25A1-201ENST00000399126 SART3Q15020 963 aaKnown RBP17.66■□□□□ 0.42
COL25A1-201ENST00000399126 NTRK3Q16288 839 aa17.66■□□□□ 0.42
COL25A1-201ENST00000399126 SLC44A5Q8NCS7 719 aa17.66■□□□□ 0.42
COL25A1-201ENST00000399126 DAGLAQ9Y4D2 1042 aa17.66■□□□□ 0.42
COL25A1-201ENST00000399126 SBK1Q52WX2 424 aa17.65■□□□□ 0.42
COL25A1-201ENST00000399126 C12orf60Q5U649 245 aa17.65■□□□□ 0.42
COL25A1-201ENST00000399126 TTC6Q86TZ1 520 aa17.65■□□□□ 0.42
COL25A1-201ENST00000399126 NOL10Q9BSC4 688 aaKnown RBP17.65■□□□□ 0.42
COL25A1-201ENST00000399126 MYH15Q9Y2K3 1946 aa17.65■□□□□ 0.42
COL25A1-201ENST00000399126 ERICH2A1L162 156 aa17.65■□□□□ 0.42
COL25A1-201ENST00000399126 G3V3G9 751 aa17.65■□□□□ 0.42
COL25A1-201ENST00000399126 DCAF8Q5TAQ9 597 aa17.65■□□□□ 0.42
COL25A1-201ENST00000399126 TEX11Q8IYF3 940 aa17.65■□□□□ 0.42
COL25A1-201ENST00000399126 CCDC82Q8N4S0 544 aa17.65■□□□□ 0.42
COL25A1-201ENST00000399126 NUP133Q8WUM0 1156 aa17.65■□□□□ 0.42
COL25A1-201ENST00000399126 ZSCAN10Q96SZ4 725 aaPredicted RBP17.65■□□□□ 0.42
COL25A1-201ENST00000399126 FTOQ9C0B1 505 aaKnown RBP eCLIP17.65■□□□□ 0.42
COL25A1-201ENST00000399126 GAKO14976 1311 aa17.65■□□□□ 0.42
COL25A1-201ENST00000399126 C21orf2O43822 256 aa17.65■□□□□ 0.42
COL25A1-201ENST00000399126 ZSCAN23Q3MJ62 389 aa17.65■□□□□ 0.42
COL25A1-201ENST00000399126 L1TD1Q5T7N2 865 aaKnown RBP17.65■□□□□ 0.42
COL25A1-201ENST00000399126 CNKSR1Q969H4 720 aa17.65■□□□□ 0.42
COL25A1-201ENST00000399126 TTF2Q9UNY4 1162 aaKnown RBP17.65■□□□□ 0.42
COL25A1-201ENST00000399126 C10orf71Q711Q0 1435 aa17.64■□□□□ 0.41
COL25A1-201ENST00000399126 BAZ2BQ9UIF8 2168 aaKnown RBP17.64■□□□□ 0.41
COL25A1-201ENST00000399126 ILDR1Q86SU0 546 aaPredicted RBP17.64■□□□□ 0.41
COL25A1-201ENST00000399126 ZNF654Q8IZM8 581 aa17.64■□□□□ 0.41
COL25A1-201ENST00000399126 SNED1Q8TER0 1413 aa17.64■□□□□ 0.41
COL25A1-201ENST00000399126 ZBTB7AO95365 584 aa17.64■□□□□ 0.41
COL25A1-201ENST00000399126 TPM2P07951 284 aa17.64■□□□□ 0.41
COL25A1-201ENST00000399126 AOC3Q16853 763 aa17.64■□□□□ 0.41
COL25A1-201ENST00000399126 FAM177A1Q8N128 213 aaPredicted RBP17.64■□□□□ 0.41
COL25A1-201ENST00000399126 EYA3Q99504 573 aa17.64■□□□□ 0.41
COL25A1-201ENST00000399126 MYH1P12882 1939 aa17.63■□□□□ 0.41
COL25A1-201ENST00000399126 ORC4O43929 436 aa17.63■□□□□ 0.41
COL25A1-201ENST00000399126 KRT85P78386 507 aa17.63■□□□□ 0.41
COL25A1-201ENST00000399126 C8orf76Q96K31 380 aa17.63■□□□□ 0.41
COL25A1-201ENST00000399126 PCDHAC2Q9Y5I4 1007 aa17.63■□□□□ 0.41
COL25A1-201ENST00000399126 FLT1P17948 1338 aa17.63■□□□□ 0.41
COL25A1-201ENST00000399126 DDX60LQ5H9U9 1706 aaKnown RBP17.63■□□□□ 0.41
COL25A1-201ENST00000399126 FSD2A1L4K1 749 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms