RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 ERC2O15083 957 aa17.03■□□□□ 0.32
HLA-DQB1-202ENST00000399079 PPATQ06203 517 aa17.03■□□□□ 0.32
HLA-DQB1-202ENST00000399079 RRP1BQ14684 758 aaKnown RBP17.03■□□□□ 0.32
HLA-DQB1-202ENST00000399079 KBTBD3Q8NAB2 608 aa17.03■□□□□ 0.32
HLA-DQB1-202ENST00000399079 SDR42E1Q8WUS8 393 aa17.03■□□□□ 0.32
HLA-DQB1-202ENST00000399079 BRI3BPQ8WY22 251 aa17.03■□□□□ 0.32
HLA-DQB1-202ENST00000399079 R3HDMLQ9H3Y0 253 aa17.03■□□□□ 0.32
HLA-DQB1-202ENST00000399079 DNAJC18Q9H819 358 aa17.03■□□□□ 0.32
HLA-DQB1-202ENST00000399079 FOCADQ5VW36 1801 aa17.03■□□□□ 0.32
HLA-DQB1-202ENST00000399079 CCL15-CCL14A0A0B4J2E2 113 aa17.02■□□□□ 0.32
HLA-DQB1-202ENST00000399079 TESPA1A2RU30 521 aaPredicted RBP17.02■□□□□ 0.32
HLA-DQB1-202ENST00000399079 CTNND1O60716 968 aaKnown RBP17.02■□□□□ 0.32
HLA-DQB1-202ENST00000399079 GLRX3O76003 335 aaKnown RBP17.02■□□□□ 0.32
HLA-DQB1-202ENST00000399079 MBD4O95243 580 aa17.02■□□□□ 0.32
HLA-DQB1-202ENST00000399079 GTF2A2P52657 109 aa17.02■□□□□ 0.32
HLA-DQB1-202ENST00000399079 PPIL2Q13356 520 aa17.02■□□□□ 0.32
HLA-DQB1-202ENST00000399079 UBE3CQ15386 1083 aa17.02■□□□□ 0.32
HLA-DQB1-202ENST00000399079 CCL15Q16663 113 aa17.02■□□□□ 0.32
HLA-DQB1-202ENST00000399079 CCDC84Q86UT8 332 aaPredicted RBP17.02■□□□□ 0.32
HLA-DQB1-202ENST00000399079 SCYL3Q8IZE3 742 aa17.02■□□□□ 0.32
HLA-DQB1-202ENST00000399079 CRNKL1Q9BZJ0 848 aaKnown RBP17.02■□□□□ 0.32
HLA-DQB1-202ENST00000399079 PUS7LQ9H0K6 701 aaKnown RBP17.02■□□□□ 0.32
HLA-DQB1-202ENST00000399079 SIPA1L1O43166 1804 aa17.01■□□□□ 0.31
HLA-DQB1-202ENST00000399079 PRKAB2O43741 272 aa17.01■□□□□ 0.31
HLA-DQB1-202ENST00000399079 PTPRAP18433 802 aa17.01■□□□□ 0.31
HLA-DQB1-202ENST00000399079 PDE1AP54750 535 aa17.01■□□□□ 0.31
HLA-DQB1-202ENST00000399079 PICK1Q9NRD5 415 aa17.01■□□□□ 0.31
HLA-DQB1-202ENST00000399079 HERC5Q9UII4 1024 aaKnown RBP17.01■□□□□ 0.31
HLA-DQB1-202ENST00000399079 ZHX2Q9Y6X8 837 aa17.01■□□□□ 0.31
HLA-DQB1-202ENST00000399079 NUCB1Q02818 461 aa17.01■□□□□ 0.31
HLA-DQB1-202ENST00000399079 EVX2Q03828 476 aa17.01■□□□□ 0.31
HLA-DQB1-202ENST00000399079 ZSCAN25Q6NSZ9 544 aa17.01■□□□□ 0.31
HLA-DQB1-202ENST00000399079 METTL16Q86W50 562 aaKnown RBP17.01■□□□□ 0.31
HLA-DQB1-202ENST00000399079 CHD1LQ86WJ1 897 aa17.01■□□□□ 0.31
HLA-DQB1-202ENST00000399079 CRACR2BQ8N4Y2 399 aaPredicted RBP17.01■□□□□ 0.31
HLA-DQB1-202ENST00000399079 STAP2Q9UGK3 403 aa17.01■□□□□ 0.31
HLA-DQB1-202ENST00000399079 CASP8AP2Q9UKL3 1982 aa17■□□□□ 0.31
HLA-DQB1-202ENST00000399079 HLA-DOAP06340 250 aa17■□□□□ 0.31
HLA-DQB1-202ENST00000399079 PLCD1P51178 756 aa17■□□□□ 0.31
HLA-DQB1-202ENST00000399079 SNAPC2Q13487 334 aa17■□□□□ 0.31
HLA-DQB1-202ENST00000399079 FOXP4Q8IVH2 680 aaPredicted RBP17■□□□□ 0.31
HLA-DQB1-202ENST00000399079 FAM43AQ8N2R8 423 aa17■□□□□ 0.31
HLA-DQB1-202ENST00000399079 DCP1AQ9NPI6 582 aaPredicted RBP17■□□□□ 0.31
HLA-DQB1-202ENST00000399079 LAMB1P07942 1786 aa17■□□□□ 0.31
HLA-DQB1-202ENST00000399079 RNF113AO15541 343 aaKnown RBP16.99■□□□□ 0.31
HLA-DQB1-202ENST00000399079 ALDH1A1P00352 501 aa16.99■□□□□ 0.31
HLA-DQB1-202ENST00000399079 CETPP11597 493 aa16.99■□□□□ 0.31
HLA-DQB1-202ENST00000399079 CAP2P40123 477 aa16.99■□□□□ 0.31
HLA-DQB1-202ENST00000399079 JAG1P78504 1218 aa16.99■□□□□ 0.31
HLA-DQB1-202ENST00000399079 SHROOM1Q2M3G4 852 aaPredicted RBP16.99■□□□□ 0.31
HLA-DQB1-202ENST00000399079 TNS4Q8IZW8 715 aa16.99■□□□□ 0.31
HLA-DQB1-202ENST00000399079 OSBP2Q969R2 916 aa16.99■□□□□ 0.31
HLA-DQB1-202ENST00000399079 MCM9Q9NXL9 1143 aa16.99■□□□□ 0.31
HLA-DQB1-202ENST00000399079 KCNH4Q9UQ05 1017 aa16.99■□□□□ 0.31
HLA-DQB1-202ENST00000399079 MYH7P12883 1935 aa16.98■□□□□ 0.31
HLA-DQB1-202ENST00000399079 POLR3DP05423 398 aaPredicted RBP16.98■□□□□ 0.31
HLA-DQB1-202ENST00000399079 OTUD7BQ6GQQ9 843 aa16.98■□□□□ 0.31
HLA-DQB1-202ENST00000399079 TRIM34Q9BYJ4 488 aa16.98■□□□□ 0.31
HLA-DQB1-202ENST00000399079 AFG3L2Q9Y4W6 797 aa16.98■□□□□ 0.31
HLA-DQB1-202ENST00000399079 MYH1P12882 1939 aa16.98■□□□□ 0.31
HLA-DQB1-202ENST00000399079 BTBD19C9JJ37 291 aa16.97■□□□□ 0.31
HLA-DQB1-202ENST00000399079 CRHR2Q13324 411 aa16.97■□□□□ 0.31
HLA-DQB1-202ENST00000399079 TTC6Q86TZ1 520 aa16.97■□□□□ 0.31
HLA-DQB1-202ENST00000399079 ZNF296Q8WUU4 475 aaPredicted RBP16.97■□□□□ 0.31
HLA-DQB1-202ENST00000399079 APPBP2Q92624 585 aa16.97■□□□□ 0.31
HLA-DQB1-202ENST00000399079 FSD1Q9BTV5 496 aa16.97■□□□□ 0.31
HLA-DQB1-202ENST00000399079 CFHR5Q9BXR6 569 aa16.97■□□□□ 0.31
HLA-DQB1-202ENST00000399079 SERPINB13Q9UIV8 391 aa16.97■□□□□ 0.31
HLA-DQB1-202ENST00000399079 DOCK1Q14185 1865 aa16.96■□□□□ 0.31
HLA-DQB1-202ENST00000399079 TRIM75PA6NK02 468 aa16.96■□□□□ 0.31
HLA-DQB1-202ENST00000399079 GPR25O00155 361 aa16.96■□□□□ 0.31
HLA-DQB1-202ENST00000399079 GDF11O95390 407 aa16.96■□□□□ 0.31
HLA-DQB1-202ENST00000399079 CYP2D6P10635 497 aa16.96■□□□□ 0.31
HLA-DQB1-202ENST00000399079 MOGSQ13724 837 aa16.96■□□□□ 0.31
HLA-DQB1-202ENST00000399079 PLEKHM2Q8IWE5 1019 aa16.96■□□□□ 0.31
HLA-DQB1-202ENST00000399079 SEC62Q99442 399 aaKnown RBP16.96■□□□□ 0.31
HLA-DQB1-202ENST00000399079 SLC4A4Q9Y6R1 1079 aa16.96■□□□□ 0.31
HLA-DQB1-202ENST00000399079 SMIM22K7EJ46 135 aa16.96■□□□□ 0.3
HLA-DQB1-202ENST00000399079 M0R2C6 588 aa16.96■□□□□ 0.3
HLA-DQB1-202ENST00000399079 ZFYP08048 801 aaPredicted RBP16.96■□□□□ 0.3
HLA-DQB1-202ENST00000399079 STRBPQ96SI9 672 aaKnown RBP16.96■□□□□ 0.3
HLA-DQB1-202ENST00000399079 EHD4Q9H223 541 aa16.96■□□□□ 0.3
HLA-DQB1-202ENST00000399079 ATP8A2Q9NTI2 1148 aa16.96■□□□□ 0.3
HLA-DQB1-202ENST00000399079 DDX60LQ5H9U9 1706 aaKnown RBP16.95■□□□□ 0.3
HLA-DQB1-202ENST00000399079 CYP2D7A0A087X1C5 515 aa16.95■□□□□ 0.3
HLA-DQB1-202ENST00000399079 CXCL11O14625 94 aa16.95■□□□□ 0.3
HLA-DQB1-202ENST00000399079 TAF1CQ15572 869 aaPredicted RBP16.95■□□□□ 0.3
HLA-DQB1-202ENST00000399079 TATDN1Q6P1N9 297 aa16.95■□□□□ 0.3
HLA-DQB1-202ENST00000399079 NAV1Q8NEY1 1877 aa16.94■□□□□ 0.3
HLA-DQB1-202ENST00000399079 A0A0G2JLL6 359 aaPredicted RBP16.94■□□□□ 0.3
HLA-DQB1-202ENST00000399079 USP17L12C9JPN9 530 aa16.94■□□□□ 0.3
HLA-DQB1-202ENST00000399079 USP17L21D6R901 530 aa16.94■□□□□ 0.3
HLA-DQB1-202ENST00000399079 GPAA1O43292 621 aa16.94■□□□□ 0.3
HLA-DQB1-202ENST00000399079 SPP2Q13103 211 aa16.94■□□□□ 0.3
HLA-DQB1-202ENST00000399079 PRRT2Q7Z6L0 340 aaPredicted RBP16.94■□□□□ 0.3
HLA-DQB1-202ENST00000399079 EVI5LQ96CN4 794 aa16.94■□□□□ 0.3
HLA-DQB1-202ENST00000399079 DYNLL2Q96FJ2 89 aa16.94■□□□□ 0.3
HLA-DQB1-202ENST00000399079 USP17L5A8MUK1 530 aa16.93■□□□□ 0.3
HLA-DQB1-202ENST00000399079 GSG1L2A8MUP6 293 aa16.93■□□□□ 0.3
HLA-DQB1-202ENST00000399079 ASNSP08243 561 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms