RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 BAG6P46379 1132 aa11.63□□□□□ -0.55
HMGCLL1-205ENST00000398661 R3HDM1Q15032 1099 aaKnown RBP11.63□□□□□ -0.55
HMGCLL1-205ENST00000398661 ANKRD18AQ8IVF6 992 aa11.63□□□□□ -0.55
HMGCLL1-205ENST00000398661 GPATCH11Q8N954 259 aa11.63□□□□□ -0.55
HMGCLL1-205ENST00000398661 PARD6BQ9BYG5 372 aa11.63□□□□□ -0.55
HMGCLL1-205ENST00000398661 CFAP45Q9UL16 551 aa11.63□□□□□ -0.55
HMGCLL1-205ENST00000398661 MINPP1Q9UNW1 487 aa11.63□□□□□ -0.55
HMGCLL1-205ENST00000398661 ZAP70P43403 619 aa11.63□□□□□ -0.55
HMGCLL1-205ENST00000398661 RPS8P62241 208 aaKnown RBP11.63□□□□□ -0.55
HMGCLL1-205ENST00000398661 GNL2Q13823 731 aaKnown RBP11.63□□□□□ -0.55
HMGCLL1-205ENST00000398661 PPM1EQ8WY54 764 aa11.63□□□□□ -0.55
HMGCLL1-205ENST00000398661 FSD1Q9BTV5 496 aa11.63□□□□□ -0.55
HMGCLL1-205ENST00000398661 GOLPH3LQ9H4A5 285 aa11.63□□□□□ -0.55
HMGCLL1-205ENST00000398661 IFNKQ9P0W0 207 aa11.63□□□□□ -0.55
HMGCLL1-205ENST00000398661 A0A0D9SFI3 127 aa11.62□□□□□ -0.55
HMGCLL1-205ENST00000398661 GLRX3O76003 335 aaKnown RBP11.62□□□□□ -0.55
HMGCLL1-205ENST00000398661 MCAMP43121 646 aa11.62□□□□□ -0.55
HMGCLL1-205ENST00000398661 SART3Q15020 963 aaKnown RBP11.62□□□□□ -0.55
HMGCLL1-205ENST00000398661 SPEF2Q9C093 1822 aa11.62□□□□□ -0.55
HMGCLL1-205ENST00000398661 DDX60Q8IY21 1712 aaKnown RBP11.62□□□□□ -0.55
HMGCLL1-205ENST00000398661 ANKRD1Q15327 319 aa11.62□□□□□ -0.55
HMGCLL1-205ENST00000398661 LONRF2Q1L5Z9 754 aa11.62□□□□□ -0.55
HMGCLL1-205ENST00000398661 CREB3L3Q68CJ9 461 aa11.62□□□□□ -0.55
HMGCLL1-205ENST00000398661 FOXR1Q6PIV2 292 aa11.62□□□□□ -0.55
HMGCLL1-205ENST00000398661 CCDC73Q6ZRK6 1079 aa11.62□□□□□ -0.55
HMGCLL1-205ENST00000398661 RSRC2Q7L4I2 434 aaKnown RBP11.62□□□□□ -0.55
HMGCLL1-205ENST00000398661 ZNF589Q86UQ0 364 aaPredicted RBP11.62□□□□□ -0.55
HMGCLL1-205ENST00000398661 FBXW7Q969H0 707 aa11.62□□□□□ -0.55
HMGCLL1-205ENST00000398661 NYXQ9GZU5 481 aa11.62□□□□□ -0.55
HMGCLL1-205ENST00000398661 STK32BQ9NY57 414 aa11.62□□□□□ -0.55
HMGCLL1-205ENST00000398661 VPS18Q9P253 973 aa11.62□□□□□ -0.55
HMGCLL1-205ENST00000398661 TNS1Q9HBL0 1735 aaKnown RBP11.61□□□□□ -0.55
HMGCLL1-205ENST00000398661 MAP2K7O14733 419 aa11.61□□□□□ -0.55
HMGCLL1-205ENST00000398661 KINO60870 393 aaKnown RBP11.61□□□□□ -0.55
HMGCLL1-205ENST00000398661 IFIT1P09914 478 aaKnown RBP11.61□□□□□ -0.55
HMGCLL1-205ENST00000398661 ADRA2BP18089 450 aa11.61□□□□□ -0.55
HMGCLL1-205ENST00000398661 PSMA5P28066 241 aa11.61□□□□□ -0.55
HMGCLL1-205ENST00000398661 CORO7P57737 925 aa11.61□□□□□ -0.55
HMGCLL1-205ENST00000398661 CCDC102BQ68D86 513 aa11.61□□□□□ -0.55
HMGCLL1-205ENST00000398661 SUGP1Q8IWZ8 645 aaKnown RBP11.61□□□□□ -0.55
HMGCLL1-205ENST00000398661 RABGGTAQ92696 567 aa11.61□□□□□ -0.55
HMGCLL1-205ENST00000398661 ANKIB1Q9P2G1 1089 aa11.61□□□□□ -0.55
HMGCLL1-205ENST00000398661 RBM8AQ9Y5S9 174 aaKnown RBP11.61□□□□□ -0.55
HMGCLL1-205ENST00000398661 MYH3P11055 1940 aa11.61□□□□□ -0.55
HMGCLL1-205ENST00000398661 TNRC6CQ9HCJ0 1690 aaKnown RBP11.61□□□□□ -0.55
HMGCLL1-205ENST00000398661 BCORQ6W2J9 1755 aa11.61□□□□□ -0.55
HMGCLL1-205ENST00000398661 A0A0G2JLW4 131 aa11.61□□□□□ -0.55
HMGCLL1-205ENST00000398661 CEBPZQ03701 1054 aaKnown RBP11.61□□□□□ -0.55
HMGCLL1-205ENST00000398661 PPP2R3AQ06190 1150 aa11.61□□□□□ -0.55
HMGCLL1-205ENST00000398661 SF3B3Q15393 1217 aaKnown RBP11.61□□□□□ -0.55
HMGCLL1-205ENST00000398661 TTC39AQ5SRH9 613 aa11.61□□□□□ -0.55
HMGCLL1-205ENST00000398661 JAKMIP3Q5VZ66 844 aa11.61□□□□□ -0.55
HMGCLL1-205ENST00000398661 ZNF622Q969S3 477 aaKnown RBP eCLIP11.61□□□□□ -0.55
HMGCLL1-205ENST00000398661 ZSCAN16Q9H4T2 348 aaPredicted RBP11.61□□□□□ -0.55
HMGCLL1-205ENST00000398661 TAF6LQ9Y6J9 622 aa11.61□□□□□ -0.55
HMGCLL1-205ENST00000398661 CIAO1O76071 339 aa11.6□□□□□ -0.55
HMGCLL1-205ENST00000398661 MYCNP04198 464 aaPredicted RBP11.6□□□□□ -0.55
HMGCLL1-205ENST00000398661 MAP3K9P80192 1104 aa11.6□□□□□ -0.55
HMGCLL1-205ENST00000398661 STK3Q13188 491 aa11.6□□□□□ -0.55
HMGCLL1-205ENST00000398661 NMIQ13287 307 aaPredicted RBP11.6□□□□□ -0.55
HMGCLL1-205ENST00000398661 RPGRQ92834 1020 aaKnown RBP11.6□□□□□ -0.55
HMGCLL1-205ENST00000398661 BRF1Q92994 677 aa11.6□□□□□ -0.55
HMGCLL1-205ENST00000398661 MKRN1Q9UHC7 482 aaKnown RBP11.6□□□□□ -0.55
HMGCLL1-205ENST00000398661 PRR29P0C7W0 189 aa11.6□□□□□ -0.55
HMGCLL1-205ENST00000398661 APOBRQ0VD83 1088 aa11.6□□□□□ -0.55
HMGCLL1-205ENST00000398661 CT47A1Q5JQC4 288 aaPredicted RBP11.6□□□□□ -0.55
HMGCLL1-205ENST00000398661 BLOC1S2Q6QNY1 142 aa11.6□□□□□ -0.55
HMGCLL1-205ENST00000398661 CCDC91Q7Z6B0 441 aa11.6□□□□□ -0.55
HMGCLL1-205ENST00000398661 ENGASEQ8NFI3 743 aa11.6□□□□□ -0.55
HMGCLL1-205ENST00000398661 ERCC4Q92889 916 aaPredicted RBP11.6□□□□□ -0.55
HMGCLL1-205ENST00000398661 DDX11Q96FC9 970 aa11.6□□□□□ -0.55
HMGCLL1-205ENST00000398661 GPATCH3Q96I76 525 aa11.6□□□□□ -0.55
HMGCLL1-205ENST00000398661 TCEANC2Q96MN5 208 aa11.6□□□□□ -0.55
HMGCLL1-205ENST00000398661 RCOR1Q9UKL0 485 aa11.6□□□□□ -0.55
HMGCLL1-205ENST00000398661 ZNF609O15014 1411 aa11.6□□□□□ -0.55
HMGCLL1-205ENST00000398661 SCN7AQ01118 1682 aa11.6□□□□□ -0.55
HMGCLL1-205ENST00000398661 CCDC151A5D8V7 595 aa11.59□□□□□ -0.55
HMGCLL1-205ENST00000398661 H3BQV1 296 aa11.59□□□□□ -0.55
HMGCLL1-205ENST00000398661 FAM160A1Q05DH4 1040 aa11.59□□□□□ -0.55
HMGCLL1-205ENST00000398661 RASGRF1Q13972 1273 aa11.59□□□□□ -0.55
HMGCLL1-205ENST00000398661 TOB2Q14106 344 aaPredicted RBP11.59□□□□□ -0.55
HMGCLL1-205ENST00000398661 BRD3Q15059 726 aa11.59□□□□□ -0.55
HMGCLL1-205ENST00000398661 SLC10A5Q5PT55 438 aa11.59□□□□□ -0.55
HMGCLL1-205ENST00000398661 SWT1Q5T5J6 900 aaKnown RBP11.59□□□□□ -0.55
HMGCLL1-205ENST00000398661 IFFO2Q5TF58 517 aa11.59□□□□□ -0.55
HMGCLL1-205ENST00000398661 NLGN1Q8N2Q7 840 aa11.59□□□□□ -0.55
HMGCLL1-205ENST00000398661 GOLGA1Q92805 767 aa11.59□□□□□ -0.55
HMGCLL1-205ENST00000398661 CDC5LQ99459 802 aaKnown RBP11.59□□□□□ -0.55
HMGCLL1-205ENST00000398661 ALDH8A1Q9H2A2 487 aaPredicted RBP11.59□□□□□ -0.55
HMGCLL1-205ENST00000398661 SLC27A2O14975 620 aa11.59□□□□□ -0.55
HMGCLL1-205ENST00000398661 ZSCAN12O43309 604 aa11.59□□□□□ -0.55
HMGCLL1-205ENST00000398661 JAK2O60674 1132 aa11.59□□□□□ -0.55
HMGCLL1-205ENST00000398661 IDH1O75874 414 aaKnown RBP11.59□□□□□ -0.55
HMGCLL1-205ENST00000398661 CPP00450 1065 aa11.59□□□□□ -0.55
HMGCLL1-205ENST00000398661 MCTP2Q6DN12 878 aa11.59□□□□□ -0.55
HMGCLL1-205ENST00000398661 ILDR2Q71H61 639 aa11.59□□□□□ -0.55
HMGCLL1-205ENST00000398661 BPIFA3Q9BQP9 254 aa11.59□□□□□ -0.55
HMGCLL1-205ENST00000398661 PDE11AQ9HCR9 933 aa11.59□□□□□ -0.55
HMGCLL1-205ENST00000398661 PAG1Q9NWQ8 432 aa11.59□□□□□ -0.55
HMGCLL1-205ENST00000398661 MRFAP1Q9Y605 127 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms