RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 FPGT-TNNI3KV9GXZ4 949 aa13.14□□□□□ -0.31
TMF1-201ENST00000398559 THOC2Q8NI27 1593 aaKnown RBP13.14□□□□□ -0.31
TMF1-201ENST00000398559 SH3BP5O60239 455 aa13.14□□□□□ -0.31
TMF1-201ENST00000398559 ERCC6LQ2NKX8 1250 aa13.14□□□□□ -0.31
TMF1-201ENST00000398559 TTC38Q5R3I4 469 aa13.14□□□□□ -0.31
TMF1-201ENST00000398559 PNMA8AQ86V59 439 aaPredicted RBP13.14□□□□□ -0.31
TMF1-201ENST00000398559 VTI1AQ96AJ9 217 aa13.14□□□□□ -0.31
TMF1-201ENST00000398559 V9GY48 417 aaPredicted RBP13.14□□□□□ -0.31
TMF1-201ENST00000398559 PIK3C2GO75747 1445 aa13.14□□□□□ -0.31
TMF1-201ENST00000398559 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.14□□□□□ -0.31
TMF1-201ENST00000398559 TIMM10P62072 90 aa13.14□□□□□ -0.31
TMF1-201ENST00000398559 ITIH3Q06033 890 aa13.14□□□□□ -0.31
TMF1-201ENST00000398559 SND1Q7KZF4 910 aaKnown RBP eCLIP13.14□□□□□ -0.31
TMF1-201ENST00000398559 CEP120Q8N960 986 aa13.14□□□□□ -0.31
TMF1-201ENST00000398559 PPANQ9NQ55 473 aaKnown RBP13.14□□□□□ -0.31
TMF1-201ENST00000398559 ASIC3Q9UHC3 531 aa13.14□□□□□ -0.31
TMF1-201ENST00000398559 FANCAO15360 1455 aa13.14□□□□□ -0.31
TMF1-201ENST00000398559 TSNAXIP1Q2TAA8 658 aa13.13□□□□□ -0.31
TMF1-201ENST00000398559 LIN9Q5TKA1 542 aa13.13□□□□□ -0.31
TMF1-201ENST00000398559 CCDC62Q6P9F0 684 aa13.13□□□□□ -0.31
TMF1-201ENST00000398559 NELFBQ8WX92 580 aa13.13□□□□□ -0.31
TMF1-201ENST00000398559 NFE2L3Q9Y4A8 694 aa13.13□□□□□ -0.31
TMF1-201ENST00000398559 RIMBP2O15034 1052 aa13.13□□□□□ -0.31
TMF1-201ENST00000398559 ANGEL1Q9UNK9 670 aaKnown RBP13.13□□□□□ -0.31
TMF1-201ENST00000398559 NUP160Q12769 1436 aa13.13□□□□□ -0.31
TMF1-201ENST00000398559 CCDC169A6NNP5 214 aa13.13□□□□□ -0.31
TMF1-201ENST00000398559 ERCC3P19447 782 aa13.13□□□□□ -0.31
TMF1-201ENST00000398559 HHATQ5VTY9 493 aa13.13□□□□□ -0.31
TMF1-201ENST00000398559 SDCCAG8Q86SQ7 713 aaPredicted RBP13.13□□□□□ -0.31
TMF1-201ENST00000398559 DIS3L2Q8IYB7 885 aaKnown RBP13.13□□□□□ -0.31
TMF1-201ENST00000398559 EPSTI1Q96J88 318 aa13.13□□□□□ -0.31
TMF1-201ENST00000398559 HMGXB3Q12766 1538 aa13.13□□□□□ -0.31
TMF1-201ENST00000398559 FLT4P35916 1363 aa13.13□□□□□ -0.31
TMF1-201ENST00000398559 BCL2L12Q9HB09 334 aa13.13□□□□□ -0.31
TMF1-201ENST00000398559 ABCC1P33527 1531 aa13.13□□□□□ -0.31
TMF1-201ENST00000398559 CETN3O15182 167 aa13.13□□□□□ -0.31
TMF1-201ENST00000398559 MAGEA1P43355 309 aa13.13□□□□□ -0.31
TMF1-201ENST00000398559 PLCB1Q9NQ66 1216 aa13.13□□□□□ -0.31
TMF1-201ENST00000398559 CFAP221Q4G0U5 840 aa13.12□□□□□ -0.31
TMF1-201ENST00000398559 PLEKHA4Q9H4M7 779 aa13.12□□□□□ -0.31
TMF1-201ENST00000398559 MRPL12P52815 198 aaKnown RBP13.12□□□□□ -0.31
TMF1-201ENST00000398559 PPFIA1Q13136 1202 aa13.12□□□□□ -0.31
TMF1-201ENST00000398559 TRMT44Q8IYL2 757 aaKnown RBP13.12□□□□□ -0.31
TMF1-201ENST00000398559 PHKBQ93100 1093 aa13.12□□□□□ -0.31
TMF1-201ENST00000398559 ANKRD2Q9GZV1 360 aa13.12□□□□□ -0.31
TMF1-201ENST00000398559 TBC1D7Q9P0N9 293 aa13.12□□□□□ -0.31
TMF1-201ENST00000398559 NSFL1CQ9UNZ2 370 aaKnown RBP13.12□□□□□ -0.31
TMF1-201ENST00000398559 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.12□□□□□ -0.31
TMF1-201ENST00000398559 CASQ2O14958 399 aaPredicted RBP13.12□□□□□ -0.31
TMF1-201ENST00000398559 PFDN4Q9NQP4 134 aa13.12□□□□□ -0.31
TMF1-201ENST00000398559 CTTNBP2NLQ9P2B4 639 aa13.12□□□□□ -0.31
TMF1-201ENST00000398559 ZFYVE9O95405 1425 aa13.12□□□□□ -0.31
TMF1-201ENST00000398559 B4DLN1 442 aa13.12□□□□□ -0.31
TMF1-201ENST00000398559 GDAP1L1Q96MZ0 367 aa13.12□□□□□ -0.31
TMF1-201ENST00000398559 DENND2AQ9ULE3 1009 aa13.12□□□□□ -0.31
TMF1-201ENST00000398559 SGSM2O43147 1006 aa13.11□□□□□ -0.31
TMF1-201ENST00000398559 PNOCQ13519 176 aa13.11□□□□□ -0.31
TMF1-201ENST00000398559 PSMD6Q15008 389 aa13.11□□□□□ -0.31
TMF1-201ENST00000398559 HAUS3Q68CZ6 603 aa13.11□□□□□ -0.31
TMF1-201ENST00000398559 ZC3H12CQ9C0D7 883 aaKnown RBP13.11□□□□□ -0.31
TMF1-201ENST00000398559 DDX21Q9NR30 783 aaKnown RBP eCLIP13.11□□□□□ -0.314e-9■■■■■ 37.3
TMF1-201ENST00000398559 AOX1Q06278 1338 aa13.11□□□□□ -0.31
TMF1-201ENST00000398559 PLCH2O75038 1416 aa13.11□□□□□ -0.31
TMF1-201ENST00000398559 KIF3CO14782 793 aa13.11□□□□□ -0.31
TMF1-201ENST00000398559 ADKP55263 362 aaKnown RBP13.11□□□□□ -0.31
TMF1-201ENST00000398559 DYMQ7RTS9 669 aa13.11□□□□□ -0.31
TMF1-201ENST00000398559 MYL10Q9BUA6 226 aa13.11□□□□□ -0.31
TMF1-201ENST00000398559 USTQ9Y2C2 406 aa13.11□□□□□ -0.31
TMF1-201ENST00000398559 KDM2BQ8NHM5 1336 aa13.11□□□□□ -0.31
TMF1-201ENST00000398559 RNMTO43148 476 aaKnown RBP13.11□□□□□ -0.31
TMF1-201ENST00000398559 SMTNP53814 917 aa13.11□□□□□ -0.31
TMF1-201ENST00000398559 MTMR3Q13615 1198 aa13.11□□□□□ -0.31
TMF1-201ENST00000398559 CROCCP2Q86T23 111 aa13.11□□□□□ -0.31
TMF1-201ENST00000398559 MGARPQ8TDB4 240 aa13.11□□□□□ -0.31
TMF1-201ENST00000398559 XPO4Q9C0E2 1151 aaKnown RBP13.11□□□□□ -0.31
TMF1-201ENST00000398559 BLZF1Q9H2G9 400 aa13.11□□□□□ -0.31
TMF1-201ENST00000398559 TMEM63CQ9P1W3 806 aa13.11□□□□□ -0.31
TMF1-201ENST00000398559 GPAA1O43292 621 aa13.11□□□□□ -0.31
TMF1-201ENST00000398559 JAK2O60674 1132 aa13.11□□□□□ -0.31
TMF1-201ENST00000398559 RPS6KA1Q15418 735 aa13.11□□□□□ -0.31
TMF1-201ENST00000398559 NCAPH2Q6IBW4 605 aa13.11□□□□□ -0.31
TMF1-201ENST00000398559 KLHDC4Q8TBB5 520 aa13.11□□□□□ -0.31
TMF1-201ENST00000398559 DBNDD2Q9BQY9 259 aa13.11□□□□□ -0.31
TMF1-201ENST00000398559 FCHSD1Q86WN1 690 aa13.1□□□□□ -0.31
TMF1-201ENST00000398559 TSKSQ9UJT2 592 aa13.1□□□□□ -0.31
TMF1-201ENST00000398559 EIF6P56537 245 aaKnown RBP13.1□□□□□ -0.31
TMF1-201ENST00000398559 CTDSPL2Q05D32 466 aa13.1□□□□□ -0.31
TMF1-201ENST00000398559 TYW1BQ6NUM6 668 aa13.1□□□□□ -0.31
TMF1-201ENST00000398559 TPTE2Q6XPS3 522 aa13.1□□□□□ -0.31
TMF1-201ENST00000398559 CCDC105Q8IYK2 499 aa13.1□□□□□ -0.31
TMF1-201ENST00000398559 SYCE1Q8N0S2 351 aa13.1□□□□□ -0.31
TMF1-201ENST00000398559 PROCA1Q8NCQ7 364 aaPredicted RBP13.1□□□□□ -0.31
TMF1-201ENST00000398559 FAM114A2Q9NRY5 505 aa13.1□□□□□ -0.31
TMF1-201ENST00000398559 TXNDC9O14530 226 aa13.1□□□□□ -0.31
TMF1-201ENST00000398559 KLHL30Q0D2K2 578 aa13.1□□□□□ -0.31
TMF1-201ENST00000398559 SFMBT2Q5VUG0 894 aa13.1□□□□□ -0.31
TMF1-201ENST00000398559 DENND2CQ68D51 928 aa13.1□□□□□ -0.31
TMF1-201ENST00000398559 MAEAQ7L5Y9 396 aa13.1□□□□□ -0.31
TMF1-201ENST00000398559 EYA1Q99502 592 aa13.1□□□□□ -0.31
TMF1-201ENST00000398559 ZMYM4Q5VZL5 1548 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms