RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 HINFPQ9BQA5 517 aa12.59□□□□□ -0.39
CSGALNACT1-202ENST00000397998 PPP6R2O75170 966 aa12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 CYLC1P35663 651 aaPredicted RBP12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 KRT2P35908 639 aa12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 EXOSC10Q01780 885 aaKnown RBP12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 CC2D1AQ6P1N0 951 aaPredicted RBP12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 SRGAP1Q7Z6B7 1085 aa12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 DHX37Q8IY37 1157 aaKnown RBP12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 IQUBQ8NA54 791 aa12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 WDR24Q96S15 920 aa12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 ZHX3Q9H4I2 956 aa12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 VPS54Q9P1Q0 977 aa12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 TCHHQ07283 1943 aa12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 FRMPD1Q5SYB0 1578 aa12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 CEP170BQ9Y4F5 1589 aaPredicted RBP12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 GOLGA6L10A6NI86 522 aa12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 KRT86O43790 486 aa12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 AKR1B10O60218 316 aa12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 TTC31Q49AM3 519 aaPredicted RBP12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 CACNA2D4Q7Z3S7 1137 aa12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 GPIHBP1Q8IV16 184 aa12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 SLC35F6Q8N357 371 aa12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 GPATCH11Q8N954 259 aa12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 FAM107BQ9H098 131 aa12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 MAN1B1Q9UKM7 699 aa12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 V9GY48 417 aaPredicted RBP12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 MACROD2A1Z1Q3 448 aa12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 IRS4O14654 1257 aaPredicted RBP12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 MYO1BO43795 1136 aa12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 PRDM1O75626 825 aa12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 CASP14P31944 242 aa12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 LRRN4CLQ8ND94 238 aa12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 IL17RAQ96F46 866 aa12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 IRX2Q9BZI1 471 aaPredicted RBP12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 CDC23Q9UJX2 597 aa12.58□□□□□ -0.4
CSGALNACT1-202ENST00000397998 FOXN1O15353 648 aa12.57□□□□□ -0.4
CSGALNACT1-202ENST00000397998 BMP15O95972 392 aa12.57□□□□□ -0.4
CSGALNACT1-202ENST00000397998 FDPSP14324 419 aaKnown RBP12.57□□□□□ -0.4
CSGALNACT1-202ENST00000397998 CKAP4Q07065 602 aaKnown RBP12.57□□□□□ -0.4
CSGALNACT1-202ENST00000397998 NR5A1Q13285 461 aa12.57□□□□□ -0.4
CSGALNACT1-202ENST00000397998 ODF2Q5BJF6 829 aa12.57□□□□□ -0.4
CSGALNACT1-202ENST00000397998 TMTC1Q8IUR5 882 aa12.57□□□□□ -0.4
CSGALNACT1-202ENST00000397998 DDX17Q92841 729 aaKnown RBP12.57□□□□□ -0.4
CSGALNACT1-202ENST00000397998 KIF20BQ96Q89 1820 aa12.57□□□□□ -0.4
CSGALNACT1-202ENST00000397998 PXDNLA1KZ92 1463 aa12.57□□□□□ -0.4
CSGALNACT1-202ENST00000397998 ATP8B1O43520 1251 aa12.57□□□□□ -0.4
CSGALNACT1-202ENST00000397998 TADA3O75528 432 aa12.57□□□□□ -0.4
CSGALNACT1-202ENST00000397998 CLSTN1O94985 981 aa12.57□□□□□ -0.4
CSGALNACT1-202ENST00000397998 TUBB4BP68371 445 aa12.57□□□□□ -0.4
CSGALNACT1-202ENST00000397998 IRX5P78411 483 aaPredicted RBP12.57□□□□□ -0.4
CSGALNACT1-202ENST00000397998 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.57□□□□□ -0.4
CSGALNACT1-202ENST00000397998 WWC3Q9ULE0 1092 aa12.57□□□□□ -0.4
CSGALNACT1-202ENST00000397998 DIP2CQ9Y2E4 1556 aa12.57□□□□□ -0.4
CSGALNACT1-202ENST00000397998 CCDC151A5D8V7 595 aa12.57□□□□□ -0.4
CSGALNACT1-202ENST00000397998 RBL2Q08999 1139 aa12.57□□□□□ -0.4
CSGALNACT1-202ENST00000397998 CYP26C1Q6V0L0 522 aa12.57□□□□□ -0.4
CSGALNACT1-202ENST00000397998 AFAP1L1Q8TED9 768 aa12.57□□□□□ -0.4
CSGALNACT1-202ENST00000397998 BPIFA3Q9BQP9 254 aa12.57□□□□□ -0.4
CSGALNACT1-202ENST00000397998 RMND1Q9NWS8 449 aa12.57□□□□□ -0.4
CSGALNACT1-202ENST00000397998 ADAM21Q9UKJ8 722 aa12.57□□□□□ -0.4
CSGALNACT1-202ENST00000397998 IDEP14735 1019 aa12.56□□□□□ -0.4
CSGALNACT1-202ENST00000397998 MNAT1P51948 309 aa12.56□□□□□ -0.4
CSGALNACT1-202ENST00000397998 KIF5AQ12840 1032 aa12.56□□□□□ -0.4
CSGALNACT1-202ENST00000397998 CCDC178Q5BJE1 867 aa12.56□□□□□ -0.4
CSGALNACT1-202ENST00000397998 RNF187Q5TA31 235 aaPredicted RBP12.56□□□□□ -0.4
CSGALNACT1-202ENST00000397998 EHBP1Q8NDI1 1231 aa12.56□□□□□ -0.4
CSGALNACT1-202ENST00000397998 FAN1Q9Y2M0 1017 aa12.56□□□□□ -0.4
CSGALNACT1-202ENST00000397998 TUBBP07437 444 aa12.56□□□□□ -0.4
CSGALNACT1-202ENST00000397998 USP8P40818 1118 aa12.56□□□□□ -0.4
CSGALNACT1-202ENST00000397998 WWC2Q6AWC2 1192 aa12.56□□□□□ -0.4
CSGALNACT1-202ENST00000397998 RGS22Q8NE09 1264 aa12.56□□□□□ -0.4
CSGALNACT1-202ENST00000397998 ACRBPQ8NEB7 543 aa12.56□□□□□ -0.4
CSGALNACT1-202ENST00000397998 EEF2KMTQ96G04 330 aa12.56□□□□□ -0.4
CSGALNACT1-202ENST00000397998 CDC5LQ99459 802 aaKnown RBP12.56□□□□□ -0.4
CSGALNACT1-202ENST00000397998 TSPY2A6NKD2 308 aa12.56□□□□□ -0.4
CSGALNACT1-202ENST00000397998 PSMA7O14818 248 aa12.56□□□□□ -0.4
CSGALNACT1-202ENST00000397998 KRT83P78385 493 aa12.56□□□□□ -0.4
CSGALNACT1-202ENST00000397998 ST5P78524 1137 aa12.56□□□□□ -0.4
CSGALNACT1-202ENST00000397998 SHC4Q6S5L8 630 aa12.56□□□□□ -0.4
CSGALNACT1-202ENST00000397998 GOLGA5Q8TBA6 731 aa12.56□□□□□ -0.4
CSGALNACT1-202ENST00000397998 ANKRD65E5RJM6 399 aa12.55□□□□□ -0.4
CSGALNACT1-202ENST00000397998 SOGA3Q5TF21 947 aa12.55□□□□□ -0.4
CSGALNACT1-202ENST00000397998 CSRNP2Q9H175 543 aa12.55□□□□□ -0.4
CSGALNACT1-202ENST00000397998 LUC7LQ9NQ29 371 aaKnown RBP12.55□□□□□ -0.4
CSGALNACT1-202ENST00000397998 INCENPQ9NQS7 918 aa12.55□□□□□ -0.4
CSGALNACT1-202ENST00000397998 EBAG9O00559 213 aa12.55□□□□□ -0.4
CSGALNACT1-202ENST00000397998 PDE6AP16499 860 aa12.55□□□□□ -0.4
CSGALNACT1-202ENST00000397998 CYP2C19P33261 490 aa12.55□□□□□ -0.4
CSGALNACT1-202ENST00000397998 PLCD1P51178 756 aa12.55□□□□□ -0.4
CSGALNACT1-202ENST00000397998 RAD51AP2Q09MP3 1159 aa12.55□□□□□ -0.4
CSGALNACT1-202ENST00000397998 MTF1Q14872 753 aa12.55□□□□□ -0.4
CSGALNACT1-202ENST00000397998 CCDC42Q96M95 316 aa12.55□□□□□ -0.4
CSGALNACT1-202ENST00000397998 PSMB7Q99436 277 aa12.55□□□□□ -0.4
CSGALNACT1-202ENST00000397998 NAA15Q9BXJ9 866 aaKnown RBP12.55□□□□□ -0.4
CSGALNACT1-202ENST00000397998 GPR108Q9NPR9 543 aa12.55□□□□□ -0.4
CSGALNACT1-202ENST00000397998 AXIN2Q9Y2T1 843 aa12.55□□□□□ -0.4
CSGALNACT1-202ENST00000397998 ENC1O14682 589 aa12.55□□□□□ -0.4
CSGALNACT1-202ENST00000397998 CASP1P29466 404 aa12.55□□□□□ -0.4
CSGALNACT1-202ENST00000397998 CDR1P51861 262 aa12.55□□□□□ -0.4
CSGALNACT1-202ENST00000397998 PAK1Q13153 545 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms