RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 TIAM2Q8IVF5 1701 aa21.16■□□□□ 0.98
CHRFAM7A-202ENST00000397827 STK36Q9NRP7 1315 aa21.16■□□□□ 0.98
CHRFAM7A-202ENST00000397827 RREB1Q92766 1687 aa21.16■□□□□ 0.98
CHRFAM7A-202ENST00000397827 BCORQ6W2J9 1755 aa21.16■□□□□ 0.98
CHRFAM7A-202ENST00000397827 MAGEB6P1A0A0J9YX57 407 aa21.16■□□□□ 0.98
CHRFAM7A-202ENST00000397827 NLRP12P59046 1061 aa21.16■□□□□ 0.98
CHRFAM7A-202ENST00000397827 SPECC1Q5M775 1068 aa21.16■□□□□ 0.98
CHRFAM7A-202ENST00000397827 HPSEQ9Y251 543 aa21.16■□□□□ 0.98
CHRFAM7A-202ENST00000397827 COL1A1P02452 1464 aaPredicted RBP21.16■□□□□ 0.98
CHRFAM7A-202ENST00000397827 ZNF804BA4D1E1 1349 aa21.16■□□□□ 0.98
CHRFAM7A-202ENST00000397827 RIOK3O14730 519 aaKnown RBP21.15■□□□□ 0.98
CHRFAM7A-202ENST00000397827 DYNLL1P63167 89 aaKnown RBP21.15■□□□□ 0.98
CHRFAM7A-202ENST00000397827 CHAF1AQ13111 956 aaPredicted RBP21.15■□□□□ 0.98
CHRFAM7A-202ENST00000397827 NOSTRINQ8IVI9 506 aa21.15■□□□□ 0.98
CHRFAM7A-202ENST00000397827 DIS3L2Q8IYB7 885 aaKnown RBP21.15■□□□□ 0.98
CHRFAM7A-202ENST00000397827 CELF1Q92879 486 aaKnown RBP21.15■□□□□ 0.98
CHRFAM7A-202ENST00000397827 CYP2D7A0A087X1C5 515 aa21.15■□□□□ 0.98
CHRFAM7A-202ENST00000397827 TRIM22Q8IYM9 498 aa21.15■□□□□ 0.98
CHRFAM7A-202ENST00000397827 SMARCC1Q92922 1105 aaPredicted RBP21.15■□□□□ 0.98
CHRFAM7A-202ENST00000397827 UBAC1Q9BSL1 405 aa21.15■□□□□ 0.98
CHRFAM7A-202ENST00000397827 MMP1P03956 469 aa21.14■□□□□ 0.98
CHRFAM7A-202ENST00000397827 GTF2F1P35269 517 aaKnown RBP eCLIP21.14■□□□□ 0.98
CHRFAM7A-202ENST00000397827 RBM6P78332 1123 aaKnown RBP21.14■□□□□ 0.98
CHRFAM7A-202ENST00000397827 PNOCQ13519 176 aa21.14■□□□□ 0.98
CHRFAM7A-202ENST00000397827 NBPF11Q86T75 865 aa21.14■□□□□ 0.98
CHRFAM7A-202ENST00000397827 ZNF654Q8IZM8 581 aa21.14■□□□□ 0.98
CHRFAM7A-202ENST00000397827 RNF41Q9H4P4 317 aaPredicted RBP21.14■□□□□ 0.98
CHRFAM7A-202ENST00000397827 MINPP1Q9UNW1 487 aa21.14■□□□□ 0.98
CHRFAM7A-202ENST00000397827 FAM98CQ17RN3 349 aaKnown RBP21.14■□□□□ 0.97
CHRFAM7A-202ENST00000397827 CLEC4GQ6UXB4 293 aa21.14■□□□□ 0.97
CHRFAM7A-202ENST00000397827 PTF1AQ7RTS3 328 aa21.14■□□□□ 0.97
CHRFAM7A-202ENST00000397827 GNL3LQ9NVN8 582 aaKnown RBP21.14■□□□□ 0.97
CHRFAM7A-202ENST00000397827 LAMB2P55268 1798 aa21.14■□□□□ 0.97
CHRFAM7A-202ENST00000397827 TOB1P50616 345 aaPredicted RBP21.14■□□□□ 0.97
CHRFAM7A-202ENST00000397827 RESP18Q5W5W9 173 aa21.14■□□□□ 0.97
CHRFAM7A-202ENST00000397827 CRACR2BQ8N4Y2 399 aaPredicted RBP21.14■□□□□ 0.97
CHRFAM7A-202ENST00000397827 FANCBQ8NB91 859 aa21.14■□□□□ 0.97
CHRFAM7A-202ENST00000397827 BSDC1Q9NW68 430 aaPredicted RBP21.14■□□□□ 0.97
CHRFAM7A-202ENST00000397827 SMC2O95347 1197 aa21.13■□□□□ 0.97
CHRFAM7A-202ENST00000397827 NR5A1Q13285 461 aa21.13■□□□□ 0.97
CHRFAM7A-202ENST00000397827 CCDC24Q8N4L8 307 aa21.13■□□□□ 0.97
CHRFAM7A-202ENST00000397827 WASF1Q92558 559 aa21.13■□□□□ 0.97
CHRFAM7A-202ENST00000397827 BPIFA3Q9BQP9 254 aa21.13■□□□□ 0.97
CHRFAM7A-202ENST00000397827 RIOK1Q9BRS2 568 aaKnown RBP21.13■□□□□ 0.97
CHRFAM7A-202ENST00000397827 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.13■□□□□ 0.97
CHRFAM7A-202ENST00000397827 TNKSO95271 1327 aa21.13■□□□□ 0.97
CHRFAM7A-202ENST00000397827 SKILP12757 684 aa21.13■□□□□ 0.97
CHRFAM7A-202ENST00000397827 KLRK1P26718 216 aa21.13■□□□□ 0.97
CHRFAM7A-202ENST00000397827 SF3B3Q15393 1217 aaKnown RBP21.13■□□□□ 0.97
CHRFAM7A-202ENST00000397827 TPD52L1Q16890 204 aaPredicted RBP21.13■□□□□ 0.97
CHRFAM7A-202ENST00000397827 LONRF3Q496Y0 759 aa21.13■□□□□ 0.97
CHRFAM7A-202ENST00000397827 CAVIN4Q5BKX8 364 aa21.13■□□□□ 0.97
CHRFAM7A-202ENST00000397827 TBC1D9BQ66K14 1250 aa21.13■□□□□ 0.97
CHRFAM7A-202ENST00000397827 BARGINQ6ZT62 677 aa21.13■□□□□ 0.97
CHRFAM7A-202ENST00000397827 FAM84BQ96KN1 310 aaPredicted RBP21.13■□□□□ 0.97
CHRFAM7A-202ENST00000397827 TIGD1Q96MW7 591 aa21.13■□□□□ 0.97
CHRFAM7A-202ENST00000397827 XPO4Q9C0E2 1151 aaKnown RBP21.13■□□□□ 0.97
CHRFAM7A-202ENST00000397827 IFNKQ9P0W0 207 aa21.13■□□□□ 0.97
CHRFAM7A-202ENST00000397827 USP27XA6NNY8 438 aa21.12■□□□□ 0.97
CHRFAM7A-202ENST00000397827 PRDM1O75626 825 aa21.12■□□□□ 0.97
CHRFAM7A-202ENST00000397827 UBE4AQ14139 1066 aa21.12■□□□□ 0.97
CHRFAM7A-202ENST00000397827 NCAPHQ15003 741 aa21.12■□□□□ 0.97
CHRFAM7A-202ENST00000397827 SAFBQ15424 915 aaKnown RBP eCLIP21.12■□□□□ 0.97
CHRFAM7A-202ENST00000397827 ZNF384Q8TF68 577 aa21.12■□□□□ 0.97
CHRFAM7A-202ENST00000397827 TNNT1P13805 278 aa21.12■□□□□ 0.97
CHRFAM7A-202ENST00000397827 LMOD1P29536 600 aaPredicted RBP21.12■□□□□ 0.97
CHRFAM7A-202ENST00000397827 GRIN1Q05586 938 aa21.12■□□□□ 0.97
CHRFAM7A-202ENST00000397827 NID2Q14112 1375 aa21.11■□□□□ 0.97
CHRFAM7A-202ENST00000397827 CICQ96RK0 1608 aaPredicted RBP21.11■□□□□ 0.97
CHRFAM7A-202ENST00000397827 ATP2B1P20020 1258 aa21.11■□□□□ 0.97
CHRFAM7A-202ENST00000397827 TMTC2Q8N394 836 aa21.11■□□□□ 0.97
CHRFAM7A-202ENST00000397827 OXER1Q8TDS5 423 aa21.11■□□□□ 0.97
CHRFAM7A-202ENST00000397827 ESR2Q92731 530 aa21.11■□□□□ 0.97
CHRFAM7A-202ENST00000397827 CUTAO60888 179 aa21.11■□□□□ 0.97
CHRFAM7A-202ENST00000397827 DEXIO95424 95 aa21.11■□□□□ 0.97
CHRFAM7A-202ENST00000397827 ZNF771Q7L3S4 317 aaPredicted RBP21.11■□□□□ 0.97
CHRFAM7A-202ENST00000397827 TUBE1Q9UJT0 475 aa21.11■□□□□ 0.97
CHRFAM7A-202ENST00000397827 KCNH3Q9ULD8 1083 aa21.11■□□□□ 0.97
CHRFAM7A-202ENST00000397827 BAZ2AQ9UIF9 1905 aaKnown RBP21.1■□□□□ 0.97
CHRFAM7A-202ENST00000397827 hCG_1642624A0A1W2PR95 340 aa21.1■□□□□ 0.97
CHRFAM7A-202ENST00000397827 PIP4K2BP78356 416 aa21.1■□□□□ 0.97
CHRFAM7A-202ENST00000397827 CCZ1BP86790 482 aa21.1■□□□□ 0.97
CHRFAM7A-202ENST00000397827 CCZ1P86791 482 aaPredicted RBP21.1■□□□□ 0.97
CHRFAM7A-202ENST00000397827 SEC23AQ15436 765 aa21.1■□□□□ 0.97
CHRFAM7A-202ENST00000397827 METTL16Q86W50 562 aaKnown RBP21.1■□□□□ 0.97
CHRFAM7A-202ENST00000397827 CCDC196A0A1B0GTZ2 297 aa21.1■□□□□ 0.97
CHRFAM7A-202ENST00000397827 FOXN1O15353 648 aa21.1■□□□□ 0.97
CHRFAM7A-202ENST00000397827 EVX2Q03828 476 aa21.1■□□□□ 0.97
CHRFAM7A-202ENST00000397827 MAPK8IP2Q13387 824 aaPredicted RBP21.1■□□□□ 0.97
CHRFAM7A-202ENST00000397827 KRI1Q8N9T8 703 aaKnown RBP21.1■□□□□ 0.97
CHRFAM7A-202ENST00000397827 MYH2Q9UKX2 1941 aa21.1■□□□□ 0.97
CHRFAM7A-202ENST00000397827 FAM237AA0A1B0GTK4 181 aa21.09■□□□□ 0.97
CHRFAM7A-202ENST00000397827 ATP1A3P13637 1013 aa21.09■□□□□ 0.97
CHRFAM7A-202ENST00000397827 FOXP4Q8IVH2 680 aaPredicted RBP21.09■□□□□ 0.97
CHRFAM7A-202ENST00000397827 CNNM3Q8NE01 707 aa21.09■□□□□ 0.97
CHRFAM7A-202ENST00000397827 BCL2L12Q9HB09 334 aa21.09■□□□□ 0.97
CHRFAM7A-202ENST00000397827 PCDHB6Q9Y5E3 794 aa21.09■□□□□ 0.97
CHRFAM7A-202ENST00000397827 COL5A3P25940 1745 aaPredicted RBP21.09■□□□□ 0.97
CHRFAM7A-202ENST00000397827 CACNA1SQ13698 1873 aa21.09■□□□□ 0.97
CHRFAM7A-202ENST00000397827 ENAHQ8N8S7 591 aaPredicted RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms