RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 LDHBP07195 334 aaKnown RBP6.77□□□□□ -1.33
PTPRD-206ENST00000397617 TPM4P67936 248 aa6.77□□□□□ -1.33
PTPRD-206ENST00000397617 RTN1Q16799 776 aa6.77□□□□□ -1.33
PTPRD-206ENST00000397617 PRR5LQ6MZQ0 368 aa6.77□□□□□ -1.33
PTPRD-206ENST00000397617 DEFB129Q9H1M3 183 aa6.77□□□□□ -1.33
PTPRD-206ENST00000397617 IMPACTQ9P2X3 320 aa6.77□□□□□ -1.33
PTPRD-206ENST00000397617 TUBE1Q9UJT0 475 aa6.77□□□□□ -1.33
PTPRD-206ENST00000397617 HPSEQ9Y251 543 aa6.77□□□□□ -1.33
PTPRD-206ENST00000397617 LAMB1P07942 1786 aa6.77□□□□□ -1.33
PTPRD-206ENST00000397617 MAGEB6P1A0A0J9YX57 407 aa6.77□□□□□ -1.33
PTPRD-206ENST00000397617 VPS37CA5D8V6 355 aaPredicted RBP6.77□□□□□ -1.33
PTPRD-206ENST00000397617 GYS1P13807 737 aa6.77□□□□□ -1.33
PTPRD-206ENST00000397617 CDC25BP30305 580 aa6.77□□□□□ -1.33
PTPRD-206ENST00000397617 MCTP1Q6DN14 999 aa6.77□□□□□ -1.33
PTPRD-206ENST00000397617 NOSTRINQ8IVI9 506 aa6.77□□□□□ -1.33
PTPRD-206ENST00000397617 LINC00116Q8NCU8 138 aa6.77□□□□□ -1.33
PTPRD-206ENST00000397617 GGA1Q9UJY5 639 aa6.77□□□□□ -1.33
PTPRD-206ENST00000397617 CCP110O43303 1012 aa6.77□□□□□ -1.33
PTPRD-206ENST00000397617 FMNL1O95466 1100 aaPredicted RBP6.77□□□□□ -1.33
PTPRD-206ENST00000397617 NT5DC1Q5TFE4 455 aa6.77□□□□□ -1.33
PTPRD-206ENST00000397617 RPGRQ92834 1020 aaKnown RBP6.77□□□□□ -1.33
PTPRD-206ENST00000397617 CCDC9Q9Y3X0 531 aaKnown RBP6.77□□□□□ -1.33
PTPRD-206ENST00000397617 SPTLC2O15270 562 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 PTPREP23469 700 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 KIF23Q02241 960 aaPredicted RBP6.76□□□□□ -1.33
PTPRD-206ENST00000397617 HOOK2Q96ED9 719 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 LRRC27Q9C0I9 530 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 DCP1AQ9NPI6 582 aaPredicted RBP6.76□□□□□ -1.33
PTPRD-206ENST00000397617 ZKSCAN5Q9Y2L8 839 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 SMTNL1A8MU46 457 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 MBD4O95243 580 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 STX1AQ16623 288 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 GSDMAQ96QA5 445 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 FOCADQ5VW36 1801 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 MYO5AQ9Y4I1 1855 aaKnown RBP6.76□□□□□ -1.33
PTPRD-206ENST00000397617 SCP2P22307 547 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 ANTXR2P58335 489 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 SCRN1Q12765 414 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 FOXP4Q8IVH2 680 aaPredicted RBP6.76□□□□□ -1.33
PTPRD-206ENST00000397617 MLKLQ8NB16 471 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 CCDC112Q8NEF3 446 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 TMEM63CQ9P1W3 806 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 ENTPD3O75355 529 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 ADORA1P30542 326 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 PPARAQ07869 468 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 TMEM67Q5HYA8 995 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 C12orf60Q5U649 245 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 ZNF654Q8IZM8 581 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 RAB34Q9BZG1 259 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 MROH7-TTC4A0A0A0MT08 1334 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 LTBP3Q9NS15 1303 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 KIAA2012Q0VF49 1180 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 ST3GAL1Q11201 340 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 CNNM4Q6P4Q7 775 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 SPATA20Q8TB22 786 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 MAP7D2Q96T17 732 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 LY9Q9HBG7 655 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 SERPINA10Q9UK55 444 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 IFIT3O14879 490 aaKnown RBP6.76□□□□□ -1.33
PTPRD-206ENST00000397617 USP48Q86UV5 1035 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 PUS7LQ9H0K6 701 aaKnown RBP6.76□□□□□ -1.33
PTPRD-206ENST00000397617 HPS5Q9UPZ3 1129 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 DLEC1Q9Y238 1755 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 STK38Q15208 465 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 STRIP1Q5VSL9 837 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 ANO1Q5XXA6 986 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 RABGAP1Q9Y3P9 1069 aa6.76□□□□□ -1.33
PTPRD-206ENST00000397617 CYP7A1P22680 504 aa6.75□□□□□ -1.33
PTPRD-206ENST00000397617 COBLL1Q53SF7 1204 aa6.75□□□□□ -1.33
PTPRD-206ENST00000397617 PIH1D3Q9NQM4 214 aaKnown RBP6.75□□□□□ -1.33
PTPRD-206ENST00000397617 HERC5Q9UII4 1024 aaKnown RBP6.75□□□□□ -1.33
PTPRD-206ENST00000397617 GOLGA6L9A6NEM1 432 aa6.75□□□□□ -1.33
PTPRD-206ENST00000397617 CCDC69A6NI79 296 aa6.75□□□□□ -1.33
PTPRD-206ENST00000397617 TRIM75PA6NK02 468 aa6.75□□□□□ -1.33
PTPRD-206ENST00000397617 HCLS1P14317 486 aaPredicted RBP6.75□□□□□ -1.33
PTPRD-206ENST00000397617 FUT2Q10981 343 aa6.75□□□□□ -1.33
PTPRD-206ENST00000397617 SCARF1Q14162 830 aa6.75□□□□□ -1.33
PTPRD-206ENST00000397617 ASPRV1Q53RT3 343 aa6.75□□□□□ -1.33
PTPRD-206ENST00000397617 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.75□□□□□ -1.33
PTPRD-206ENST00000397617 TMTC3Q6ZXV5 915 aa6.75□□□□□ -1.33
PTPRD-206ENST00000397617 KRI1Q8N9T8 703 aaKnown RBP6.75□□□□□ -1.33
PTPRD-206ENST00000397617 MASTLQ96GX5 879 aa6.75□□□□□ -1.33
PTPRD-206ENST00000397617 SRGNP10124 158 aa6.75□□□□□ -1.33
PTPRD-206ENST00000397617 FCHSD1Q86WN1 690 aa6.75□□□□□ -1.33
PTPRD-206ENST00000397617 ZNF594Q96JF6 807 aaPredicted RBP6.75□□□□□ -1.33
PTPRD-206ENST00000397617 PSMD1Q99460 953 aa6.75□□□□□ -1.33
PTPRD-206ENST00000397617 ZC3H12CQ9C0D7 883 aaKnown RBP6.75□□□□□ -1.33
PTPRD-206ENST00000397617 CCSER1Q9C0I3 900 aa6.75□□□□□ -1.33
PTPRD-206ENST00000397617 AATFQ9NY61 560 aaKnown RBP eCLIP6.75□□□□□ -1.33
PTPRD-206ENST00000397617 DZIP1Q86YF9 867 aaKnown RBP6.75□□□□□ -1.33
PTPRD-206ENST00000397617 CRACR2BQ8N4Y2 399 aaPredicted RBP6.75□□□□□ -1.33
PTPRD-206ENST00000397617 SERPINB2P05120 415 aa6.75□□□□□ -1.33
PTPRD-206ENST00000397617 SEPT2Q15019 361 aa6.75□□□□□ -1.33
PTPRD-206ENST00000397617 TXNRD1Q16881 649 aa6.75□□□□□ -1.33
PTPRD-206ENST00000397617 AXDND1Q5T1B0 1012 aaPredicted RBP6.75□□□□□ -1.33
PTPRD-206ENST00000397617 PLA2G6O60733 806 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 TUBBP07437 444 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 MUTP22033 750 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 MTMR14Q8NCE2 650 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 TNKSO95271 1327 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms