RNA–Protein interactions for RNA: ENST00000397345.7

NEB-203, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-203ENST00000397345 MCF2L2Q86YR7 1114 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 CDAN1Q8IWY9 1227 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 ANKRD2Q9GZV1 360 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 RIMS2Q9UQ26 1411 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 SLC8A1P32418 973 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 TBC1D5Q92609 795 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 KIFAP3Q92845 792 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 UPF3BQ9BZI7 483 aaKnown RBP2.82□□□□□ -1.96
NEB-203ENST00000397345 METTL14Q9HCE5 456 aaKnown RBP2.82□□□□□ -1.96
NEB-203ENST00000397345 KIF5AQ12840 1032 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 RASA3Q14644 834 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 BLOC1S2Q6QNY1 142 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 RAB11FIP4Q86YS3 637 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 IQCGQ9H095 443 aaKnown RBP2.82□□□□□ -1.96
NEB-203ENST00000397345 RYDENQ9NUL5 291 aaKnown RBP2.82□□□□□ -1.96
NEB-203ENST00000397345 AATFQ9NY61 560 aaKnown RBP eCLIP2.82□□□□□ -1.96
NEB-203ENST00000397345 CLTAP09496 248 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 CASKIN1Q8WXD9 1431 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 GPATCH4Q5T3I0 446 aaKnown RBP2.82□□□□□ -1.96
NEB-203ENST00000397345 TCP11Q8WWU5 503 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 FRMD8Q9BZ67 464 aaPredicted RBP2.82□□□□□ -1.96
NEB-203ENST00000397345 VCXQ9H320 206 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 ZNF277Q9NRM2 450 aaPredicted RBP2.82□□□□□ -1.96
NEB-203ENST00000397345 WDR19Q8NEZ3 1342 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 TATP17735 454 aaPredicted RBP2.82□□□□□ -1.96
NEB-203ENST00000397345 EXOC1Q9NV70 894 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 POLR3AO14802 1390 aaPredicted RBP2.82□□□□□ -1.96
NEB-203ENST00000397345 PSMA7O14818 248 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 ACTN4O43707 911 aaKnown RBP2.82□□□□□ -1.96
NEB-203ENST00000397345 ARHGAP18Q8N392 663 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 NFU1Q9UMS0 254 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 NUCB1Q02818 461 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 KBTBD12Q3ZCT8 623 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 OLFML1Q6UWY5 402 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.82□□□□□ -1.96
NEB-203ENST00000397345 UIMC1Q96RL1 719 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 TRIM7Q9C029 511 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 CD248Q9HCU0 757 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 HACE1Q8IYU2 909 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 RSRC1Q96IZ7 334 aaKnown RBP2.82□□□□□ -1.96
NEB-203ENST00000397345 CDK5RAP3Q96JB5 506 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 CCDC17Q96LX7 622 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 MTMR7Q9Y216 660 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 GNAT3A8MTJ3 354 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 OAS2P29728 719 aaKnown RBP2.82□□□□□ -1.96
NEB-203ENST00000397345 ENPEPQ07075 957 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 LZICQ8WZA0 190 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 NSRP1Q9H0G5 558 aaKnown RBP2.82□□□□□ -1.96
NEB-203ENST00000397345 CHMP2BQ9UQN3 213 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 ZKSCAN5Q9Y2L8 839 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 PRXQ9BXM0 1461 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 RAD51AP2Q09MP3 1159 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 PPP1R42Q7Z4L9 355 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.82□□□□□ -1.96
NEB-203ENST00000397345 RBM42Q9BTD8 480 aaKnown RBP2.82□□□□□ -1.96
NEB-203ENST00000397345 ANO2Q9NQ90 1003 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 THRAP3Q9Y2W1 955 aaKnown RBP2.82□□□□□ -1.96
NEB-203ENST00000397345 ATAD2BQ9ULI0 1458 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 IGF2BP3O00425 579 aaKnown RBP eCLIP2.82□□□□□ -1.96
NEB-203ENST00000397345 CLEC4GQ6UXB4 293 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 GRAMD1AQ96CP6 724 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 SLC5A4Q9NY91 659 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 ANAPC4Q9UJX5 808 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 FBXO2Q9UK22 296 aaPredicted RBP2.82□□□□□ -1.96
NEB-203ENST00000397345 TMEM110-MUSTN1A8MSY1 372 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 BRD3Q15059 726 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 ARIH1Q9Y4X5 557 aaPredicted RBP2.82□□□□□ -1.96
NEB-203ENST00000397345 MEIS1O00470 390 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 PPFIA2O75334 1257 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 MAP3K14Q99558 947 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 NT5C3AQ9H0P0 336 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 STX6O43752 255 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 CNNM4Q6P4Q7 775 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 SAAL1Q96ER3 474 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 SOS2Q07890 1332 aaPredicted RBP2.82□□□□□ -1.96
NEB-203ENST00000397345 LMNAP02545 664 aaKnown RBP2.82□□□□□ -1.96
NEB-203ENST00000397345 CFAP70Q5T0N1 1121 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 RILPL2Q969X0 211 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 QTRT2Q9H974 415 aaKnown RBP2.82□□□□□ -1.96
NEB-203ENST00000397345 SCNN1BP51168 640 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 NLRP6P59044 892 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 FKBP5Q13451 457 aaPredicted RBP2.82□□□□□ -1.96
NEB-203ENST00000397345 DCTPP1Q9H773 170 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 TMOD2Q9NZR1 351 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 PRR12Q9ULL5 1215 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 EXOC7Q9UPT5 735 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 CAMSAP2Q08AD1 1489 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 ZNF233A6NK53 670 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 HNRNPCP07910 306 aaKnown RBP eCLIP2.82□□□□□ -1.96
NEB-203ENST00000397345 C4orf22Q6V702 233 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 LINS1Q8NG48 757 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 CFAP61Q8NHU2 1237 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 EXOC4Q96A65 974 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 DRC3Q9H069 523 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 PDE11AQ9HCR9 933 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 GOLGA4Q13439 2230 aaKnown RBP2.82□□□□□ -1.96
NEB-203ENST00000397345 UHRF1BP1Q6BDS2 1440 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 N4BP1O75113 896 aaKnown RBP2.82□□□□□ -1.96
NEB-203ENST00000397345 DNAJB2P25686 324 aa2.82□□□□□ -1.96
NEB-203ENST00000397345 RFC1P35251 1148 aaPredicted RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms