RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 INCENPQ9NQS7 918 aa16.02■□□□□ 0.15
MCF2L-209ENST00000397036 FAM198AQ9UFP1 575 aa16.02■□□□□ 0.15
MCF2L-209ENST00000397036 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.02■□□□□ 0.15
MCF2L-209ENST00000397036 COL2A1P02458 1487 aaPredicted RBP16.02■□□□□ 0.15
MCF2L-209ENST00000397036 GRIN3BO60391 1043 aa16.01■□□□□ 0.15
MCF2L-209ENST00000397036 PFKFB2O60825 505 aa16.01■□□□□ 0.15
MCF2L-209ENST00000397036 RCAN1P53805 252 aa16.01■□□□□ 0.15
MCF2L-209ENST00000397036 SPDYE2Q495Y8 402 aa16.01■□□□□ 0.15
MCF2L-209ENST00000397036 METTL16Q86W50 562 aaKnown RBP16.01■□□□□ 0.15
MCF2L-209ENST00000397036 TDRD3Q9H7E2 651 aaKnown RBP16.01■□□□□ 0.15
MCF2L-209ENST00000397036 TCP11L1Q9NUJ3 509 aa16.01■□□□□ 0.15
MCF2L-209ENST00000397036 TMOD2Q9NZR1 351 aa16.01■□□□□ 0.15
MCF2L-209ENST00000397036 SWAP70Q9UH65 585 aa16.01■□□□□ 0.15
MCF2L-209ENST00000397036 SMIM22K7EJ46 135 aa16■□□□□ 0.15
MCF2L-209ENST00000397036 NFIAQ12857 509 aa16■□□□□ 0.15
MCF2L-209ENST00000397036 CHST3Q7LGC8 479 aa16■□□□□ 0.15
MCF2L-209ENST00000397036 IQCA1Q86XH1 822 aa16■□□□□ 0.15
MCF2L-209ENST00000397036 FOXP4Q8IVH2 680 aaPredicted RBP16■□□□□ 0.15
MCF2L-209ENST00000397036 NKX2-3Q8TAU0 364 aa16■□□□□ 0.15
MCF2L-209ENST00000397036 LRRC2Q9BYS8 371 aa16■□□□□ 0.15
MCF2L-209ENST00000397036 MYOZ2Q9NPC6 264 aa16■□□□□ 0.15
MCF2L-209ENST00000397036 ZNF70Q9UC06 446 aaPredicted RBP16■□□□□ 0.15
MCF2L-209ENST00000397036 SAP30BPQ9UHR5 308 aaKnown RBP16■□□□□ 0.15
MCF2L-209ENST00000397036 PCDHAC2Q9Y5I4 1007 aa16■□□□□ 0.15
MCF2L-209ENST00000397036 ATRNL1Q5VV63 1379 aa16■□□□□ 0.15
MCF2L-209ENST00000397036 BAZ2AQ9UIF9 1905 aaKnown RBP16■□□□□ 0.15
MCF2L-209ENST00000397036 IFIT3O14879 490 aaKnown RBP15.99■□□□□ 0.15
MCF2L-209ENST00000397036 MYO1BO43795 1136 aa15.99■□□□□ 0.15
MCF2L-209ENST00000397036 HLA-DOAP06340 250 aa15.99■□□□□ 0.15
MCF2L-209ENST00000397036 PDIA4P13667 645 aaKnown RBP15.99■□□□□ 0.15
MCF2L-209ENST00000397036 PDIA3P30101 505 aaKnown RBP15.99■□□□□ 0.15
MCF2L-209ENST00000397036 CDK8P49336 464 aa15.99■□□□□ 0.15
MCF2L-209ENST00000397036 GMPSP49915 693 aaPredicted RBP15.99■□□□□ 0.15
MCF2L-209ENST00000397036 SEC23AQ15436 765 aa15.99■□□□□ 0.15
MCF2L-209ENST00000397036 FAM83AQ86UY5 434 aa15.99■□□□□ 0.15
MCF2L-209ENST00000397036 ANKS1AQ92625 1134 aa15.99■□□□□ 0.15
MCF2L-209ENST00000397036 LLPHQ9BRT6 129 aaKnown RBP15.99■□□□□ 0.15
MCF2L-209ENST00000397036 LY9Q9HBG7 655 aa15.99■□□□□ 0.15
MCF2L-209ENST00000397036 MKNK2Q9HBH9 465 aa15.99■□□□□ 0.15
MCF2L-209ENST00000397036 TOMM22Q9NS69 142 aa15.99■□□□□ 0.15
MCF2L-209ENST00000397036 CHMP5Q9NZZ3 219 aa15.99■□□□□ 0.15
MCF2L-209ENST00000397036 PI4KBQ9UBF8 816 aa15.99■□□□□ 0.15
MCF2L-209ENST00000397036 ZC3H4Q9UPT8 1303 aaKnown RBP15.99■□□□□ 0.15
MCF2L-209ENST00000397036 ERICH2A1L162 156 aa15.99■□□□□ 0.15
MCF2L-209ENST00000397036 WNT10BO00744 389 aa15.99■□□□□ 0.15
MCF2L-209ENST00000397036 RANBP6O60518 1105 aaKnown RBP15.99■□□□□ 0.15
MCF2L-209ENST00000397036 LARGE1O95461 756 aa15.99■□□□□ 0.15
MCF2L-209ENST00000397036 PICALMQ13492 652 aa15.99■□□□□ 0.15
MCF2L-209ENST00000397036 TMEM67Q5HYA8 995 aa15.99■□□□□ 0.15
MCF2L-209ENST00000397036 RRP12Q5JTH9 1297 aaKnown RBP15.99■□□□□ 0.15
MCF2L-209ENST00000397036 NOL8Q76FK4 1167 aaKnown RBP15.99■□□□□ 0.15
MCF2L-209ENST00000397036 ZNF444Q8N0Y2 327 aaPredicted RBP15.99■□□□□ 0.15
MCF2L-209ENST00000397036 FAM151AQ8WW52 585 aa15.99■□□□□ 0.15
MCF2L-209ENST00000397036 GTF3C6Q969F1 213 aa15.99■□□□□ 0.15
MCF2L-209ENST00000397036 UBAC1Q9BSL1 405 aa15.99■□□□□ 0.15
MCF2L-209ENST00000397036 SLKQ9H2G2 1235 aaPredicted RBP15.99■□□□□ 0.15
MCF2L-209ENST00000397036 CNOT7Q9UIV1 285 aaKnown RBP15.99■□□□□ 0.15
MCF2L-209ENST00000397036 SERPINB13Q9UIV8 391 aa15.99■□□□□ 0.15
MCF2L-209ENST00000397036 FOCADQ5VW36 1801 aa15.98■□□□□ 0.15
MCF2L-209ENST00000397036 DDX60LQ5H9U9 1706 aaKnown RBP15.98■□□□□ 0.15
MCF2L-209ENST00000397036 ZNF541Q9H0D2 1346 aa15.98■□□□□ 0.15
MCF2L-209ENST00000397036 RASA1P20936 1047 aa15.98■□□□□ 0.15
MCF2L-209ENST00000397036 EVX2Q03828 476 aa15.98■□□□□ 0.15
MCF2L-209ENST00000397036 APOBRQ0VD83 1088 aa15.98■□□□□ 0.15
MCF2L-209ENST00000397036 PPP2R5BQ15173 497 aa15.98■□□□□ 0.15
MCF2L-209ENST00000397036 DGKHQ86XP1 1220 aa15.98■□□□□ 0.15
MCF2L-209ENST00000397036 DYNLL2Q96FJ2 89 aa15.98■□□□□ 0.15
MCF2L-209ENST00000397036 ZSCAN10Q96SZ4 725 aaPredicted RBP15.98■□□□□ 0.15
MCF2L-209ENST00000397036 LARP6Q9BRS8 491 aaKnown RBP15.98■□□□□ 0.15
MCF2L-209ENST00000397036 DICER1Q9UPY3 1922 aaKnown RBP15.97■□□□□ 0.15
MCF2L-209ENST00000397036 H7C1D1 291 aa15.97■□□□□ 0.15
MCF2L-209ENST00000397036 DHX16O60231 1041 aaKnown RBP15.97■□□□□ 0.15
MCF2L-209ENST00000397036 PRDM1O75626 825 aa15.97■□□□□ 0.15
MCF2L-209ENST00000397036 NOVP48745 357 aa15.97■□□□□ 0.15
MCF2L-209ENST00000397036 ST3GAL1Q11201 340 aa15.97■□□□□ 0.15
MCF2L-209ENST00000397036 WTAPQ15007 396 aa15.97■□□□□ 0.15
MCF2L-209ENST00000397036 ZFPM1Q8IX07 1006 aa15.97■□□□□ 0.15
MCF2L-209ENST00000397036 MICALL2Q8IY33 904 aa15.97■□□□□ 0.15
MCF2L-209ENST00000397036 NEDD1Q8NHV4 660 aa15.97■□□□□ 0.15
MCF2L-209ENST00000397036 CCDC17Q96LX7 622 aa15.97■□□□□ 0.15
MCF2L-209ENST00000397036 GPHNQ9NQX3 736 aaPredicted RBP15.97■□□□□ 0.15
MCF2L-209ENST00000397036 BRPF3Q9ULD4 1205 aa15.97■□□□□ 0.15
MCF2L-209ENST00000397036 GJA3Q9Y6H8 435 aa15.97■□□□□ 0.15
MCF2L-209ENST00000397036 GOLGB1Q14789 3259 aaKnown RBP15.97■□□□□ 0.15
MCF2L-209ENST00000397036 CDK5RAP2Q96SN8 1893 aa15.96■□□□□ 0.15
MCF2L-209ENST00000397036 KLF18A0A0U1RQI7 1052 aa15.96■□□□□ 0.15
MCF2L-209ENST00000397036 TSPY2A6NKD2 308 aa15.96■□□□□ 0.15
MCF2L-209ENST00000397036 TFAP4Q01664 338 aa15.96■□□□□ 0.15
MCF2L-209ENST00000397036 APOA5Q6Q788 366 aa15.96■□□□□ 0.15
MCF2L-209ENST00000397036 SH3BP5LQ7L8J4 393 aa15.96■□□□□ 0.15
MCF2L-209ENST00000397036 SPRYD3Q8NCJ5 442 aa15.96■□□□□ 0.15
MCF2L-209ENST00000397036 GPRC5DQ9NZD1 345 aa15.96■□□□□ 0.15
MCF2L-209ENST00000397036 RNF181Q9P0P0 153 aa15.96■□□□□ 0.15
MCF2L-209ENST00000397036 HPS5Q9UPZ3 1129 aa15.96■□□□□ 0.15
MCF2L-209ENST00000397036 NAV1Q8NEY1 1877 aa15.96■□□□□ 0.15
MCF2L-209ENST00000397036 LAMB1P07942 1786 aa15.96■□□□□ 0.14
MCF2L-209ENST00000397036 NID2Q14112 1375 aa15.95■□□□□ 0.14
MCF2L-209ENST00000397036 TNKSO95271 1327 aa15.95■□□□□ 0.14
MCF2L-209ENST00000397036 SBF1O95248 1867 aa15.95■□□□□ 0.14
MCF2L-209ENST00000397036 NUCB2P80303 420 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms