RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 UBA5Q9GZZ9 404 aa17.49■□□□□ 0.39
MCF2L-205ENST00000397017 BBOX1O75936 387 aa17.48■□□□□ 0.39
MCF2L-205ENST00000397017 TCEAL9Q9UHQ7 104 aa17.48■□□□□ 0.39
MCF2L-205ENST00000397017 BCS1LQ9Y276 419 aa17.48■□□□□ 0.39
MCF2L-205ENST00000397017 CLIC4Q9Y696 253 aa17.48■□□□□ 0.39
MCF2L-205ENST00000397017 ABCC12Q96J65 1359 aa17.48■□□□□ 0.39
MCF2L-205ENST00000397017 CLRN2A0PK11 232 aa17.48■□□□□ 0.39
MCF2L-205ENST00000397017 ARID4AP29374 1257 aaPredicted RBP17.48■□□□□ 0.39
MCF2L-205ENST00000397017 CARMIL3Q8ND23 1372 aa17.48■□□□□ 0.39
MCF2L-205ENST00000397017 NR5A1Q13285 461 aa17.48■□□□□ 0.39
MCF2L-205ENST00000397017 ANO1Q5XXA6 986 aa17.48■□□□□ 0.39
MCF2L-205ENST00000397017 KCNG4Q8TDN1 519 aa17.48■□□□□ 0.39
MCF2L-205ENST00000397017 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.48■□□□□ 0.39
MCF2L-205ENST00000397017 CLIC6Q96NY7 704 aa17.48■□□□□ 0.39
MCF2L-205ENST00000397017 RGPD5Q99666 1765 aa17.47■□□□□ 0.39
MCF2L-205ENST00000397017 GYS1P13807 737 aa17.47■□□□□ 0.39
MCF2L-205ENST00000397017 PLCG2P16885 1265 aa17.47■□□□□ 0.39
MCF2L-205ENST00000397017 FRMPD2Q68DX3 1309 aaPredicted RBP17.47■□□□□ 0.39
MCF2L-205ENST00000397017 UBE2Q2LH0YL09 131 aa17.47■□□□□ 0.39
MCF2L-205ENST00000397017 MYSM1Q5VVJ2 828 aa17.47■□□□□ 0.39
MCF2L-205ENST00000397017 FBXO18Q8NFZ0 1043 aa17.47■□□□□ 0.39
MCF2L-205ENST00000397017 CLIP2Q9UDT6 1046 aa17.47■□□□□ 0.39
MCF2L-205ENST00000397017 VWA3AA6NCI4 1184 aa17.47■□□□□ 0.39
MCF2L-205ENST00000397017 TRIM75PA6NK02 468 aa17.47■□□□□ 0.39
MCF2L-205ENST00000397017 CFAP100Q494V2 611 aa17.47■□□□□ 0.39
MCF2L-205ENST00000397017 RC3H1Q5TC82 1133 aaKnown RBP17.47■□□□□ 0.39
MCF2L-205ENST00000397017 TTC12Q9H892 705 aaPredicted RBP17.47■□□□□ 0.39
MCF2L-205ENST00000397017 EPB41L4AQ9HCS5 686 aaPredicted RBP17.47■□□□□ 0.39
MCF2L-205ENST00000397017 HMGB2P26583 209 aaKnown RBP17.46■□□□□ 0.39
MCF2L-205ENST00000397017 PRKG1Q13976 671 aa17.46■□□□□ 0.39
MCF2L-205ENST00000397017 PNMA1Q8ND90 353 aa17.46■□□□□ 0.39
MCF2L-205ENST00000397017 CEP131Q9UPN4 1083 aa17.46■□□□□ 0.39
MCF2L-205ENST00000397017 SCAF8Q9UPN6 1271 aaKnown RBP17.46■□□□□ 0.39
MCF2L-205ENST00000397017 CDC27P30260 824 aa17.46■□□□□ 0.39
MCF2L-205ENST00000397017 ZNF76P36508 570 aa17.46■□□□□ 0.39
MCF2L-205ENST00000397017 AMIGO3Q86WK7 504 aa17.46■□□□□ 0.39
MCF2L-205ENST00000397017 JDP2Q8WYK2 163 aa17.46■□□□□ 0.39
MCF2L-205ENST00000397017 ANO10Q9NW15 660 aa17.46■□□□□ 0.39
MCF2L-205ENST00000397017 SH2B2O14492 632 aaPredicted RBP17.46■□□□□ 0.39
MCF2L-205ENST00000397017 DEXIO95424 95 aa17.46■□□□□ 0.39
MCF2L-205ENST00000397017 RASGRP4Q8TDF6 673 aa17.46■□□□□ 0.39
MCF2L-205ENST00000397017 RTL9Q8NET4 1388 aa17.46■□□□□ 0.38
MCF2L-205ENST00000397017 TCP10L2B9ZVM9 353 aa17.45■□□□□ 0.38
MCF2L-205ENST00000397017 ECM2O94769 699 aaPredicted RBP17.45■□□□□ 0.38
MCF2L-205ENST00000397017 TNNI2P48788 182 aa17.45■□□□□ 0.38
MCF2L-205ENST00000397017 FAM177A1Q8N128 213 aaPredicted RBP17.45■□□□□ 0.38
MCF2L-205ENST00000397017 KRT18P05783 430 aaKnown RBP17.45■□□□□ 0.38
MCF2L-205ENST00000397017 BCL2L12Q9HB09 334 aa17.45■□□□□ 0.38
MCF2L-205ENST00000397017 BAZ2BQ9UIF8 2168 aaKnown RBP17.45■□□□□ 0.38
MCF2L-205ENST00000397017 CNTNAP4Q9C0A0 1308 aa17.45■□□□□ 0.38
MCF2L-205ENST00000397017 LMOD1P29536 600 aaPredicted RBP17.45■□□□□ 0.38
MCF2L-205ENST00000397017 JAKMIP3Q5VZ66 844 aa17.45■□□□□ 0.38
MCF2L-205ENST00000397017 ADGRA1Q86SQ6 560 aa17.45■□□□□ 0.38
MCF2L-205ENST00000397017 MB21D2Q8IYB1 491 aaPredicted RBP17.45■□□□□ 0.38
MCF2L-205ENST00000397017 AOPEPQ8N6M6 819 aa17.45■□□□□ 0.38
MCF2L-205ENST00000397017 TEKT1Q969V4 418 aa17.44■□□□□ 0.38
MCF2L-205ENST00000397017 POLD1P28340 1107 aa17.44■□□□□ 0.38
MCF2L-205ENST00000397017 KRT2P35908 639 aa17.44■□□□□ 0.38
MCF2L-205ENST00000397017 EZH2Q15910 746 aaKnown RBP17.44■□□□□ 0.38
MCF2L-205ENST00000397017 CCDC47Q96A33 483 aaKnown RBP17.44■□□□□ 0.38
MCF2L-205ENST00000397017 PLEKHA8P1O95397 391 aa17.44■□□□□ 0.38
MCF2L-205ENST00000397017 UBA7P41226 1012 aa17.44■□□□□ 0.38
MCF2L-205ENST00000397017 LETM2Q2VYF4 491 aa17.44■□□□□ 0.38
MCF2L-205ENST00000397017 COL23A1Q86Y22 540 aaPredicted RBP17.44■□□□□ 0.38
MCF2L-205ENST00000397017 DCP1AQ9NPI6 582 aaPredicted RBP17.44■□□□□ 0.38
MCF2L-205ENST00000397017 ARPP21Q9UBL0 812 aaPredicted RBP17.44■□□□□ 0.38
MCF2L-205ENST00000397017 ZMYM6O95789 1325 aa17.44■□□□□ 0.38
MCF2L-205ENST00000397017 PARP1P09874 1014 aaKnown RBP17.43■□□□□ 0.38
MCF2L-205ENST00000397017 ZNF142P52746 1687 aaPredicted RBP17.43■□□□□ 0.38
MCF2L-205ENST00000397017 STX17P56962 302 aa17.43■□□□□ 0.38
MCF2L-205ENST00000397017 TBC1D22AQ8WUA7 517 aa17.43■□□□□ 0.38
MCF2L-205ENST00000397017 NSUN4Q96CB9 384 aaKnown RBP17.43■□□□□ 0.38
MCF2L-205ENST00000397017 IDEP14735 1019 aa17.43■□□□□ 0.38
MCF2L-205ENST00000397017 ANTXR2P58335 489 aa17.43■□□□□ 0.38
MCF2L-205ENST00000397017 BRAPQ7Z569 592 aa17.43■□□□□ 0.38
MCF2L-205ENST00000397017 CCAR2Q8N163 923 aaKnown RBP17.43■□□□□ 0.38
MCF2L-205ENST00000397017 AK9Q5TCS8 1911 aa17.43■□□□□ 0.38
MCF2L-205ENST00000397017 CLEC10AQ8IUN9 316 aa17.42■□□□□ 0.38
MCF2L-205ENST00000397017 ATP8A2Q9NTI2 1148 aa17.42■□□□□ 0.38
MCF2L-205ENST00000397017 TPM3P06753 285 aa17.42■□□□□ 0.38
MCF2L-205ENST00000397017 CALM1P0DP23 149 aa17.42■□□□□ 0.38
MCF2L-205ENST00000397017 CALM2P0DP24 149 aa17.42■□□□□ 0.38
MCF2L-205ENST00000397017 CALM3P0DP25 149 aa17.42■□□□□ 0.38
MCF2L-205ENST00000397017 SLC27A3Q5K4L6 730 aa17.42■□□□□ 0.38
MCF2L-205ENST00000397017 CCDC43Q96MW1 224 aaKnown RBP17.42■□□□□ 0.38
MCF2L-205ENST00000397017 PCDHA7Q9UN72 937 aa17.42■□□□□ 0.38
MCF2L-205ENST00000397017 FGFR2P21802 821 aa17.41■□□□□ 0.38
MCF2L-205ENST00000397017 USP17L2Q6R6M4 530 aa17.41■□□□□ 0.38
MCF2L-205ENST00000397017 FLAD1Q8NFF5 587 aa17.41■□□□□ 0.38
MCF2L-205ENST00000397017 CPLX3Q8WVH0 158 aa17.41■□□□□ 0.38
MCF2L-205ENST00000397017 POLR2DO15514 142 aaKnown RBP17.41■□□□□ 0.38
MCF2L-205ENST00000397017 EXOSC10Q01780 885 aaKnown RBP17.41■□□□□ 0.38
MCF2L-205ENST00000397017 CTR9Q6PD62 1173 aa17.41■□□□□ 0.38
MCF2L-205ENST00000397017 SPICE1Q8N0Z3 855 aa17.41■□□□□ 0.38
MCF2L-205ENST00000397017 FAM200AQ8TCP9 573 aa17.41■□□□□ 0.38
MCF2L-205ENST00000397017 MAPK8IP1Q9UQF2 711 aa17.41■□□□□ 0.38
MCF2L-205ENST00000397017 ADRA2BP18089 450 aa17.41■□□□□ 0.38
MCF2L-205ENST00000397017 STX1AQ16623 288 aa17.41■□□□□ 0.38
MCF2L-205ENST00000397017 AOC3Q16853 763 aa17.41■□□□□ 0.38
MCF2L-205ENST00000397017 TBC1D16Q8TBP0 767 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms