RNA–Protein interactions for RNA: ENST00000396830.2

IFFO1-203, Transcript of intermediate filament family orphan 1, humanhuman

TSL 1 (best)

Gene IFFO1, Length 1,776 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-203ENST00000396830 LDHBP07195 334 aaKnown RBP20.85■□□□□ 0.93
IFFO1-203ENST00000396830 CTDSPL2Q05D32 466 aa20.85■□□□□ 0.93
IFFO1-203ENST00000396830 PPARAQ07869 468 aa20.85■□□□□ 0.93
IFFO1-203ENST00000396830 FAM173BQ6P4H8 233 aa20.85■□□□□ 0.93
IFFO1-203ENST00000396830 NFXL1Q6ZNB6 911 aa20.85■□□□□ 0.93
IFFO1-203ENST00000396830 FBXW7Q969H0 707 aa20.85■□□□□ 0.93
IFFO1-203ENST00000396830 ZNF277Q9NRM2 450 aaPredicted RBP20.85■□□□□ 0.93
IFFO1-203ENST00000396830 ZSWIM5Q9P217 1185 aa20.85■□□□□ 0.93
IFFO1-203ENST00000396830 ZNF646O15015 1829 aaPredicted RBP20.85■□□□□ 0.93
IFFO1-203ENST00000396830 IFIT3O14879 490 aaKnown RBP20.85■□□□□ 0.93
IFFO1-203ENST00000396830 KDM4AO75164 1064 aa20.85■□□□□ 0.93
IFFO1-203ENST00000396830 MFSD14BQ5SR56 506 aa20.85■□□□□ 0.93
IFFO1-203ENST00000396830 SOGA3Q5TF21 947 aa20.85■□□□□ 0.93
IFFO1-203ENST00000396830 FBXO18Q8NFZ0 1043 aa20.85■□□□□ 0.93
IFFO1-203ENST00000396830 TRIM44Q96DX7 344 aaPredicted RBP20.85■□□□□ 0.93
IFFO1-203ENST00000396830 MXD3Q9BW11 206 aa20.85■□□□□ 0.93
IFFO1-203ENST00000396830 DDX19AQ9NUU7 478 aaKnown RBP20.85■□□□□ 0.93
IFFO1-203ENST00000396830 TFIP11Q9UBB9 837 aaKnown RBP20.85■□□□□ 0.93
IFFO1-203ENST00000396830 COL4A5P29400 1685 aa20.84■□□□□ 0.93
IFFO1-203ENST00000396830 CCDC69A6NI79 296 aa20.84■□□□□ 0.93
IFFO1-203ENST00000396830 UVSSAQ2YD98 709 aa20.84■□□□□ 0.93
IFFO1-203ENST00000396830 BRAPQ7Z569 592 aa20.84■□□□□ 0.93
IFFO1-203ENST00000396830 CERS5Q8N5B7 392 aa20.84■□□□□ 0.93
IFFO1-203ENST00000396830 FHDC1Q9C0D6 1143 aaPredicted RBP20.84■□□□□ 0.93
IFFO1-203ENST00000396830 RCOR1Q9UKL0 485 aa20.84■□□□□ 0.93
IFFO1-203ENST00000396830 SLC12A7Q9Y666 1083 aa20.84■□□□□ 0.93
IFFO1-203ENST00000396830 NT5C2P49902 561 aa20.83■□□□□ 0.93
IFFO1-203ENST00000396830 PODNQ7Z5L7 613 aa20.83■□□□□ 0.93
IFFO1-203ENST00000396830 DZIP1Q86YF9 867 aaKnown RBP20.83■□□□□ 0.93
IFFO1-203ENST00000396830 STK36Q9NRP7 1315 aa20.83■□□□□ 0.92
IFFO1-203ENST00000396830 ADD1P35611 737 aaKnown RBP20.82■□□□□ 0.92
IFFO1-203ENST00000396830 DYNLL1P63167 89 aaKnown RBP20.82■□□□□ 0.92
IFFO1-203ENST00000396830 PPP2R5BQ15173 497 aa20.82■□□□□ 0.92
IFFO1-203ENST00000396830 ESR2Q92731 530 aa20.82■□□□□ 0.92
IFFO1-203ENST00000396830 ARFGEF1Q9Y6D6 1849 aa20.82■□□□□ 0.92
IFFO1-203ENST00000396830 MYH2Q9UKX2 1941 aa20.82■□□□□ 0.92
IFFO1-203ENST00000396830 YDJCA8MPS7 323 aa20.82■□□□□ 0.92
IFFO1-203ENST00000396830 WTAPQ15007 396 aa20.82■□□□□ 0.92
IFFO1-203ENST00000396830 DIXDC1Q155Q3 683 aa20.82■□□□□ 0.92
IFFO1-203ENST00000396830 TBC1D22AQ8WUA7 517 aa20.82■□□□□ 0.92
IFFO1-203ENST00000396830 CRNKL1Q9BZJ0 848 aaKnown RBP20.82■□□□□ 0.92
IFFO1-203ENST00000396830 CCDC196A0A1B0GTZ2 297 aa20.81■□□□□ 0.92
IFFO1-203ENST00000396830 GOLGA8AA7E2F4 631 aa20.81■□□□□ 0.92
IFFO1-203ENST00000396830 NFKBIEO00221 500 aa20.81■□□□□ 0.92
IFFO1-203ENST00000396830 WASF1Q92558 559 aa20.81■□□□□ 0.92
IFFO1-203ENST00000396830 NUP62CLQ9H1M0 184 aa20.81■□□□□ 0.92
IFFO1-203ENST00000396830 ATP8A2Q9NTI2 1148 aa20.81■□□□□ 0.92
IFFO1-203ENST00000396830 LAMB1P07942 1786 aa20.81■□□□□ 0.92
IFFO1-203ENST00000396830 SDR42E1Q8WUS8 393 aa20.8■□□□□ 0.92
IFFO1-203ENST00000396830 UBAC1Q9BSL1 405 aa20.8■□□□□ 0.92
IFFO1-203ENST00000396830 TOMM22Q9NS69 142 aa20.8■□□□□ 0.92
IFFO1-203ENST00000396830 FGRP09769 529 aa20.8■□□□□ 0.92
IFFO1-203ENST00000396830 MICU3Q86XE3 530 aa20.8■□□□□ 0.92
IFFO1-203ENST00000396830 LARGE2Q8N3Y3 721 aa20.8■□□□□ 0.92
IFFO1-203ENST00000396830 MINDY4BA8MYZ0 360 aa20.79■□□□□ 0.92
IFFO1-203ENST00000396830 SLC3A2P08195 630 aaKnown RBP20.79■□□□□ 0.92
IFFO1-203ENST00000396830 IARSP41252 1262 aaKnown RBP20.79■□□□□ 0.92
IFFO1-203ENST00000396830 GSTO1P78417 241 aa20.79■□□□□ 0.92
IFFO1-203ENST00000396830 RRP12Q5JTH9 1297 aaKnown RBP20.79■□□□□ 0.92
IFFO1-203ENST00000396830 DACT2Q5SW24 774 aa20.79■□□□□ 0.92
IFFO1-203ENST00000396830 CERS3Q8IU89 383 aa20.79■□□□□ 0.92
IFFO1-203ENST00000396830 BICD2Q8TD16 824 aa20.79■□□□□ 0.92
IFFO1-203ENST00000396830 PSME4Q14997 1843 aa20.78■□□□□ 0.92
IFFO1-203ENST00000396830 MAP3K11Q16584 847 aa20.78■□□□□ 0.92
IFFO1-203ENST00000396830 STRIP1Q5VSL9 837 aa20.78■□□□□ 0.92
IFFO1-203ENST00000396830 PDLIM2Q96JY6 352 aa20.78■□□□□ 0.92
IFFO1-203ENST00000396830 TAOK3Q9H2K8 898 aa20.78■□□□□ 0.92
IFFO1-203ENST00000396830 AATFQ9NY61 560 aaKnown RBP eCLIP20.78■□□□□ 0.92
IFFO1-203ENST00000396830 RTEL1Q9NZ71 1219 aa20.78■□□□□ 0.92
IFFO1-203ENST00000396830 USP17L3A6NCW0 530 aa20.77■□□□□ 0.92
IFFO1-203ENST00000396830 USP17L4A6NCW7 530 aa20.77■□□□□ 0.92
IFFO1-203ENST00000396830 F8W031 263 aaPredicted RBP20.77■□□□□ 0.92
IFFO1-203ENST00000396830 CCDC192P0DO97 292 aa20.77■□□□□ 0.92
IFFO1-203ENST00000396830 IFNAR1P17181 557 aa20.77■□□□□ 0.92
IFFO1-203ENST00000396830 FOSBP53539 338 aa20.77■□□□□ 0.92
IFFO1-203ENST00000396830 TRIM29Q14134 588 aa20.77■□□□□ 0.92
IFFO1-203ENST00000396830 NTRK3Q16288 839 aa20.77■□□□□ 0.92
IFFO1-203ENST00000396830 HS1BP3Q53T59 392 aa20.77■□□□□ 0.92
IFFO1-203ENST00000396830 USP17L1Q7RTZ2 530 aa20.77■□□□□ 0.92
IFFO1-203ENST00000396830 NKX2-3Q8TAU0 364 aa20.77■□□□□ 0.92
IFFO1-203ENST00000396830 PGBD1Q96JS3 809 aa20.77■□□□□ 0.92
IFFO1-203ENST00000396830 USP28Q96RU2 1077 aa20.77■□□□□ 0.92
IFFO1-203ENST00000396830 ALG1Q9BT22 464 aa20.77■□□□□ 0.92
IFFO1-203ENST00000396830 FUCA2Q9BTY2 467 aa20.77■□□□□ 0.92
IFFO1-203ENST00000396830 VPS33BQ9H267 617 aa20.77■□□□□ 0.92
IFFO1-203ENST00000396830 RTN4Q9NQC3 1192 aaKnown RBP20.77■□□□□ 0.92
IFFO1-203ENST00000396830 ARPP21Q9UBL0 812 aaPredicted RBP20.77■□□□□ 0.92
IFFO1-203ENST00000396830 TACC3Q9Y6A5 838 aa20.77■□□□□ 0.92
IFFO1-203ENST00000396830 BAZ2AQ9UIF9 1905 aaKnown RBP20.77■□□□□ 0.92
IFFO1-203ENST00000396830 ECM29Q5VYK3 1845 aa20.77■□□□□ 0.92
IFFO1-203ENST00000396830 ADAMTSL1Q8N6G6 1762 aa20.77■□□□□ 0.92
IFFO1-203ENST00000396830 YEATS4O95619 227 aa20.77■□□□□ 0.91
IFFO1-203ENST00000396830 LIG1P18858 919 aa20.77■□□□□ 0.91
IFFO1-203ENST00000396830 GUCY1B3Q02153 619 aa20.77■□□□□ 0.91
IFFO1-203ENST00000396830 SSRP1Q08945 709 aaKnown RBP20.77■□□□□ 0.91
IFFO1-203ENST00000396830 SBK1Q52WX2 424 aa20.77■□□□□ 0.91
IFFO1-203ENST00000396830 INCENPQ9NQS7 918 aa20.77■□□□□ 0.91
IFFO1-203ENST00000396830 POLR3EQ9NVU0 708 aa20.77■□□□□ 0.91
IFFO1-203ENST00000396830 MROH7-TTC4A0A0A0MT08 1334 aa20.76■□□□□ 0.91
IFFO1-203ENST00000396830 CDC27P30260 824 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms