RNA–Protein interactions for RNA: ENST00000396682.6

RPA3-202, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPA3, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-202ENST00000396682 ELNP15502 786 aa16.37■□□□□ 0.21
RPA3-202ENST00000396682 UBXN2AP68543 259 aa16.37■□□□□ 0.21
RPA3-202ENST00000396682 GSTO1P78417 241 aa16.37■□□□□ 0.21
RPA3-202ENST00000396682 GORABQ5T7V8 394 aa16.37■□□□□ 0.21
RPA3-202ENST00000396682 U2AF1L4Q8WU68 220 aaKnown RBP16.37■□□□□ 0.21
RPA3-202ENST00000396682 FRAT1Q92837 279 aaPredicted RBP16.37■□□□□ 0.21
RPA3-202ENST00000396682 CLUAP1Q96AJ1 413 aa16.37■□□□□ 0.21
RPA3-202ENST00000396682 RAI14Q9P0K7 980 aa16.37■□□□□ 0.21
RPA3-202ENST00000396682 MAST2Q6P0Q8 1798 aa16.36■□□□□ 0.21
RPA3-202ENST00000396682 TNPO2O14787 897 aaKnown RBP16.36■□□□□ 0.21
RPA3-202ENST00000396682 ADCY3O60266 1144 aa16.36■□□□□ 0.21
RPA3-202ENST00000396682 LDHCP07864 332 aa16.36■□□□□ 0.21
RPA3-202ENST00000396682 SPP2Q13103 211 aa16.36■□□□□ 0.21
RPA3-202ENST00000396682 G3BP1Q13283 466 aaKnown RBP eCLIP16.36■□□□□ 0.21
RPA3-202ENST00000396682 ANKRD13CQ8N6S4 541 aa16.36■□□□□ 0.21
RPA3-202ENST00000396682 SH3RF3Q8TEJ3 882 aaPredicted RBP16.36■□□□□ 0.21
RPA3-202ENST00000396682 INHAP05111 366 aa16.35■□□□□ 0.21
RPA3-202ENST00000396682 CAP2P40123 477 aa16.35■□□□□ 0.21
RPA3-202ENST00000396682 IRF5Q13568 498 aa16.35■□□□□ 0.21
RPA3-202ENST00000396682 TEX11Q8IYF3 940 aa16.35■□□□□ 0.21
RPA3-202ENST00000396682 TMEM57Q8N5G2 664 aa16.35■□□□□ 0.21
RPA3-202ENST00000396682 PROCA1Q8NCQ7 364 aaPredicted RBP16.35■□□□□ 0.21
RPA3-202ENST00000396682 ZNF280CQ8ND82 737 aa16.35■□□□□ 0.21
RPA3-202ENST00000396682 PXYLP1Q8TE99 480 aa16.35■□□□□ 0.21
RPA3-202ENST00000396682 CDK5RAP2Q96SN8 1893 aa16.35■□□□□ 0.21
RPA3-202ENST00000396682 MYO5AQ9Y4I1 1855 aaKnown RBP16.34■□□□□ 0.21
RPA3-202ENST00000396682 SGPL1O95470 568 aa16.34■□□□□ 0.21
RPA3-202ENST00000396682 UQCRFS1P1P0C7P4 283 aa16.34■□□□□ 0.21
RPA3-202ENST00000396682 HMGCS2P54868 508 aa16.34■□□□□ 0.21
RPA3-202ENST00000396682 POLA2Q14181 598 aa16.34■□□□□ 0.21
RPA3-202ENST00000396682 FAM110CQ1W6H9 321 aa16.34■□□□□ 0.21
RPA3-202ENST00000396682 CHRDL2Q6WN34 429 aa16.34■□□□□ 0.21
RPA3-202ENST00000396682 ADGRA1Q86SQ6 560 aa16.34■□□□□ 0.21
RPA3-202ENST00000396682 DPF3Q92784 378 aa16.34■□□□□ 0.21
RPA3-202ENST00000396682 DBNDD2Q9BQY9 259 aa16.34■□□□□ 0.21
RPA3-202ENST00000396682 SNRKQ9NRH2 765 aa16.34■□□□□ 0.21
RPA3-202ENST00000396682 LRP2BPQ9P2M1 347 aa16.34■□□□□ 0.21
RPA3-202ENST00000396682 LAMA3Q16787 3333 aa16.33■□□□□ 0.2
RPA3-202ENST00000396682 FARP2O94887 1054 aaPredicted RBP16.33■□□□□ 0.2
RPA3-202ENST00000396682 JAG1P78504 1218 aa16.33■□□□□ 0.2
RPA3-202ENST00000396682 TNNI3KQ59H18 835 aa16.33■□□□□ 0.2
RPA3-202ENST00000396682 AATFQ9NY61 560 aaKnown RBP eCLIP16.33■□□□□ 0.2
RPA3-202ENST00000396682 HERC5Q9UII4 1024 aaKnown RBP16.33■□□□□ 0.2
RPA3-202ENST00000396682 PNMA3Q9UL41 463 aa16.33■□□□□ 0.2
RPA3-202ENST00000396682 FPGT-TNNI3KV9GXZ4 949 aa16.33■□□□□ 0.2
RPA3-202ENST00000396682 FOCADQ5VW36 1801 aa16.33■□□□□ 0.2
RPA3-202ENST00000396682 CYP2E1P05181 493 aaPredicted RBP16.32■□□□□ 0.2
RPA3-202ENST00000396682 SHROOM1Q2M3G4 852 aaPredicted RBP16.32■□□□□ 0.2
RPA3-202ENST00000396682 SH3D19Q5HYK7 790 aa16.32■□□□□ 0.2
RPA3-202ENST00000396682 SSH3Q8TE77 659 aa16.32■□□□□ 0.2
RPA3-202ENST00000396682 TBC1D2Q9BYX2 928 aa16.32■□□□□ 0.2
RPA3-202ENST00000396682 ASCC2Q9H1I8 757 aaPredicted RBP16.32■□□□□ 0.2
RPA3-202ENST00000396682 DNAJC18Q9H819 358 aa16.32■□□□□ 0.2
RPA3-202ENST00000396682 GPR108Q9NPR9 543 aa16.32■□□□□ 0.2
RPA3-202ENST00000396682 PAK6Q9NQU5 681 aaPredicted RBP16.32■□□□□ 0.2
RPA3-202ENST00000396682 RBM27Q9P2N5 1060 aaKnown RBP16.32■□□□□ 0.2
RPA3-202ENST00000396682 PI4KBQ9UBF8 816 aa16.32■□□□□ 0.2
RPA3-202ENST00000396682 FLT1P17948 1338 aa16.31■□□□□ 0.2
RPA3-202ENST00000396682 USP17L5A8MUK1 530 aa16.31■□□□□ 0.2
RPA3-202ENST00000396682 PPP4CP60510 307 aa16.31■□□□□ 0.2
RPA3-202ENST00000396682 TTC39AQ5SRH9 613 aa16.31■□□□□ 0.2
RPA3-202ENST00000396682 NAA16Q6N069 864 aaPredicted RBP16.31■□□□□ 0.2
RPA3-202ENST00000396682 COA7Q96BR5 231 aa16.31■□□□□ 0.2
RPA3-202ENST00000396682 DEFB118Q96PH6 123 aa16.31■□□□□ 0.2
RPA3-202ENST00000396682 HTATIP2Q9BUP3 242 aa16.31■□□□□ 0.2
RPA3-202ENST00000396682 PRO3102Q9H379 93 aa16.31■□□□□ 0.2
RPA3-202ENST00000396682 C1orf115Q9H7X2 142 aa16.31■□□□□ 0.2
RPA3-202ENST00000396682 TAOK2Q9UL54 1235 aa16.31■□□□□ 0.2
RPA3-202ENST00000396682 GCLCP48506 637 aaPredicted RBP16.3■□□□□ 0.2
RPA3-202ENST00000396682 ATP8B2P98198 1209 aa16.3■□□□□ 0.2
RPA3-202ENST00000396682 MTMR2Q13614 643 aa16.3■□□□□ 0.2
RPA3-202ENST00000396682 ZKSCAN2Q63HK3 967 aa16.3■□□□□ 0.2
RPA3-202ENST00000396682 METTL16Q86W50 562 aaKnown RBP16.3■□□□□ 0.2
RPA3-202ENST00000396682 MAPKAPK5Q8IW41 473 aa16.3■□□□□ 0.2
RPA3-202ENST00000396682 TGFBRAP1Q8WUH2 860 aa16.3■□□□□ 0.2
RPA3-202ENST00000396682 WDR18Q9BV38 432 aa16.3■□□□□ 0.2
RPA3-202ENST00000396682 CRISPLD2Q9H0B8 497 aa16.3■□□□□ 0.2
RPA3-202ENST00000396682 DHX36Q9H2U1 1008 aaKnown RBP16.3■□□□□ 0.2
RPA3-202ENST00000396682 GJD2Q9UKL4 321 aa16.3■□□□□ 0.2
RPA3-202ENST00000396682 PLXNB2O15031 1838 aa16.3■□□□□ 0.2
RPA3-202ENST00000396682 BAG3O95817 575 aa16.29■□□□□ 0.2
RPA3-202ENST00000396682 ZAP70P43403 619 aa16.29■□□□□ 0.2
RPA3-202ENST00000396682 CCDC158Q5M9N0 1113 aa16.29■□□□□ 0.2
RPA3-202ENST00000396682 ZNF512BQ96KM6 892 aaPredicted RBP16.29■□□□□ 0.2
RPA3-202ENST00000396682 NOL10Q9BSC4 688 aaKnown RBP16.29■□□□□ 0.2
RPA3-202ENST00000396682 PIH1D3Q9NQM4 214 aaKnown RBP16.29■□□□□ 0.2
RPA3-202ENST00000396682 TLR7Q9NYK1 1049 aaKnown RBP16.29■□□□□ 0.2
RPA3-202ENST00000396682 DBNLQ9UJU6 430 aaKnown RBP16.29■□□□□ 0.2
RPA3-202ENST00000396682 ALPK3Q96L96 1907 aa16.29■□□□□ 0.2
RPA3-202ENST00000396682 ZBTB7BO15156 539 aaPredicted RBP16.28■□□□□ 0.2
RPA3-202ENST00000396682 PEX10O60683 326 aa16.28■□□□□ 0.2
RPA3-202ENST00000396682 SURF6O75683 361 aaKnown RBP16.28■□□□□ 0.2
RPA3-202ENST00000396682 TFRCP02786 760 aaKnown RBP16.28■□□□□ 0.2
RPA3-202ENST00000396682 PLCG2P16885 1265 aa16.28■□□□□ 0.2
RPA3-202ENST00000396682 BACE1P56817 501 aa16.28■□□□□ 0.2
RPA3-202ENST00000396682 PABPC4Q13310 644 aaKnown RBP eCLIP16.28■□□□□ 0.23e-8■■□□□ 12.6
RPA3-202ENST00000396682 OS9Q13438 667 aaPredicted RBP16.28■□□□□ 0.2
RPA3-202ENST00000396682 AS3MTQ9HBK9 375 aa16.28■□□□□ 0.2
RPA3-202ENST00000396682 MORF4L1Q9UBU8 362 aa16.28■□□□□ 0.2
RPA3-202ENST00000396682 PALD1Q9ULE6 856 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms