RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 BSPRYQ5W0U4 402 aa11.44□□□□□ -0.58
COL4A4-201ENST00000396625 DDX41Q9UJV9 622 aaKnown RBP11.44□□□□□ -0.58
COL4A4-201ENST00000396625 VWA3AA6NCI4 1184 aa11.44□□□□□ -0.58
COL4A4-201ENST00000396625 KMT5BQ4FZB7 885 aa11.44□□□□□ -0.58
COL4A4-201ENST00000396625 CCDC124Q96CT7 223 aaKnown RBP11.44□□□□□ -0.58
COL4A4-201ENST00000396625 PLIN2Q99541 437 aa11.44□□□□□ -0.58
COL4A4-201ENST00000396625 ANLNQ9NQW6 1124 aa11.44□□□□□ -0.58
COL4A4-201ENST00000396625 ZNF219Q9P2Y4 722 aaPredicted RBP11.44□□□□□ -0.58
COL4A4-201ENST00000396625 CTNNA1P35221 906 aaKnown RBP11.44□□□□□ -0.58
COL4A4-201ENST00000396625 CASP2P42575 452 aa11.44□□□□□ -0.58
COL4A4-201ENST00000396625 MYL5Q02045 173 aa11.44□□□□□ -0.58
COL4A4-201ENST00000396625 SLC4A4Q9Y6R1 1079 aa11.44□□□□□ -0.58
COL4A4-201ENST00000396625 TOP2BQ02880 1626 aa11.44□□□□□ -0.58
COL4A4-201ENST00000396625 NUCB1Q02818 461 aa11.44□□□□□ -0.58
COL4A4-201ENST00000396625 NRBF2Q96F24 287 aa11.44□□□□□ -0.58
COL4A4-201ENST00000396625 HARSP12081 509 aaKnown RBP11.43□□□□□ -0.58
COL4A4-201ENST00000396625 GNA11P29992 359 aa11.43□□□□□ -0.58
COL4A4-201ENST00000396625 ESRRGP62508 458 aa11.43□□□□□ -0.58
COL4A4-201ENST00000396625 LONRF3Q496Y0 759 aa11.43□□□□□ -0.58
COL4A4-201ENST00000396625 KLHL7Q8IXQ5 586 aa11.43□□□□□ -0.58
COL4A4-201ENST00000396625 ANKRD20A4Q4UJ75 823 aa11.43□□□□□ -0.58
COL4A4-201ENST00000396625 ANKRD20A8PQ5CZ79 823 aa11.43□□□□□ -0.58
COL4A4-201ENST00000396625 ANKRD20A2Q5SQ80 823 aa11.43□□□□□ -0.58
COL4A4-201ENST00000396625 ANKRD20A1Q5TYW2 823 aa11.43□□□□□ -0.58
COL4A4-201ENST00000396625 PSMB7Q99436 277 aa11.43□□□□□ -0.58
COL4A4-201ENST00000396625 CTTNBP2NLQ9P2B4 639 aa11.43□□□□□ -0.58
COL4A4-201ENST00000396625 MYH9P35579 1960 aaKnown RBP11.43□□□□□ -0.58
COL4A4-201ENST00000396625 EEF1DP29692 281 aaKnown RBP11.43□□□□□ -0.58
COL4A4-201ENST00000396625 DCUN1D2Q6PH85 259 aa11.43□□□□□ -0.58
COL4A4-201ENST00000396625 PEX26Q7Z412 305 aa11.43□□□□□ -0.58
COL4A4-201ENST00000396625 NCAPD3P42695 1498 aa11.43□□□□□ -0.58
COL4A4-201ENST00000396625 ANKRD42Q8N9B4 389 aa11.43□□□□□ -0.58
COL4A4-201ENST00000396625 NLRP7Q8WX94 980 aa11.43□□□□□ -0.58
COL4A4-201ENST00000396625 PALMDQ9NP74 551 aa11.43□□□□□ -0.58
COL4A4-201ENST00000396625 DBF4Q9UBU7 674 aaPredicted RBP11.43□□□□□ -0.58
COL4A4-201ENST00000396625 KIF14Q15058 1648 aa11.43□□□□□ -0.58
COL4A4-201ENST00000396625 FLOT1O75955 427 aa11.43□□□□□ -0.58
COL4A4-201ENST00000396625 CFAP61Q8NHU2 1237 aa11.43□□□□□ -0.58
COL4A4-201ENST00000396625 CENPKQ9BS16 269 aa11.43□□□□□ -0.58
COL4A4-201ENST00000396625 GUCY2FP51841 1108 aa11.43□□□□□ -0.58
COL4A4-201ENST00000396625 SV2BQ7L1I2 683 aa11.43□□□□□ -0.58
COL4A4-201ENST00000396625 NAIPQ13075 1403 aa11.43□□□□□ -0.58
COL4A4-201ENST00000396625 IL1RL1Q01638 556 aa11.43□□□□□ -0.58
COL4A4-201ENST00000396625 RSAD2Q8WXG1 361 aa11.43□□□□□ -0.58
COL4A4-201ENST00000396625 TRIM56Q9BRZ2 755 aaKnown RBP11.43□□□□□ -0.58
COL4A4-201ENST00000396625 PPWD1Q96BP3 646 aaKnown RBP11.42□□□□□ -0.58
COL4A4-201ENST00000396625 IWS1Q96ST2 819 aa11.42□□□□□ -0.58
COL4A4-201ENST00000396625 MPRIPQ6WCQ1 1025 aa11.42□□□□□ -0.58
COL4A4-201ENST00000396625 PPP1R42Q7Z4L9 355 aa11.42□□□□□ -0.58
COL4A4-201ENST00000396625 MRFAP1Q9Y605 127 aa11.42□□□□□ -0.58
COL4A4-201ENST00000396625 SCINQ9Y6U3 715 aa11.42□□□□□ -0.58
COL4A4-201ENST00000396625 ESYT2A0FGR8 921 aa11.42□□□□□ -0.58
COL4A4-201ENST00000396625 NUDCD3Q8IVD9 361 aa11.42□□□□□ -0.58
COL4A4-201ENST00000396625 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.42□□□□□ -0.58
COL4A4-201ENST00000396625 SCYL1Q96KG9 808 aa11.42□□□□□ -0.58
COL4A4-201ENST00000396625 IFIH1Q9BYX4 1025 aaKnown RBP11.42□□□□□ -0.58
COL4A4-201ENST00000396625 BACH1O14867 736 aa11.42□□□□□ -0.58
COL4A4-201ENST00000396625 GPTP24298 496 aa11.42□□□□□ -0.58
COL4A4-201ENST00000396625 CEP104O60308 925 aa11.42□□□□□ -0.58
COL4A4-201ENST00000396625 TTC4O95801 387 aa11.42□□□□□ -0.58
COL4A4-201ENST00000396625 RSBN1LQ6PCB5 846 aaPredicted RBP11.42□□□□□ -0.58
COL4A4-201ENST00000396625 CAPS2Q9BXY5 557 aa11.42□□□□□ -0.58
COL4A4-201ENST00000396625 MCMDC2Q4G0Z9 681 aa11.42□□□□□ -0.58
COL4A4-201ENST00000396625 LIG3P49916 1009 aa11.42□□□□□ -0.58
COL4A4-201ENST00000396625 ZBBXA8MT70 800 aa11.41□□□□□ -0.58
COL4A4-201ENST00000396625 CCNT1O60563 726 aaKnown RBP11.41□□□□□ -0.58
COL4A4-201ENST00000396625 ST5P78524 1137 aa11.41□□□□□ -0.58
COL4A4-201ENST00000396625 PCF11O94913 1555 aaKnown RBP11.41□□□□□ -0.58
COL4A4-201ENST00000396625 EVI5O60447 810 aa11.41□□□□□ -0.58
COL4A4-201ENST00000396625 ATP1A2P50993 1020 aa11.41□□□□□ -0.58
COL4A4-201ENST00000396625 PIP4K2CQ8TBX8 421 aa11.41□□□□□ -0.58
COL4A4-201ENST00000396625 TCEANC2Q96MN5 208 aa11.41□□□□□ -0.58
COL4A4-201ENST00000396625 KRT10P13645 584 aa11.41□□□□□ -0.58
COL4A4-201ENST00000396625 SDSP20132 328 aa11.41□□□□□ -0.58
COL4A4-201ENST00000396625 TBC1D8BQ0IIM8 1120 aa11.41□□□□□ -0.58
COL4A4-201ENST00000396625 USTQ9Y2C2 406 aa11.41□□□□□ -0.58
COL4A4-201ENST00000396625 SP4Q02446 784 aa11.41□□□□□ -0.58
COL4A4-201ENST00000396625 BEND3Q5T5X7 828 aa11.41□□□□□ -0.58
COL4A4-201ENST00000396625 GDAP1L1Q96MZ0 367 aa11.41□□□□□ -0.58
COL4A4-201ENST00000396625 IGF1RP08069 1367 aa11.41□□□□□ -0.58
COL4A4-201ENST00000396625 EEF1B2P24534 225 aaKnown RBP11.41□□□□□ -0.58
COL4A4-201ENST00000396625 GNGT1P63211 74 aa11.41□□□□□ -0.58
COL4A4-201ENST00000396625 C16orf87Q6PH81 154 aa11.41□□□□□ -0.58
COL4A4-201ENST00000396625 RBM8AQ9Y5S9 174 aaKnown RBP11.41□□□□□ -0.58
COL4A4-201ENST00000396625 GOLGA8QA0A0J9YX86 632 aa11.41□□□□□ -0.58
COL4A4-201ENST00000396625 GOLGA8OA6NCC3 632 aa11.41□□□□□ -0.58
COL4A4-201ENST00000396625 GOLGA8KD6RF30 607 aa11.41□□□□□ -0.58
COL4A4-201ENST00000396625 GOLGA8NF8WBI6 632 aa11.41□□□□□ -0.58
COL4A4-201ENST00000396625 SART1O43290 800 aaKnown RBP11.41□□□□□ -0.58
COL4A4-201ENST00000396625 THAP12O43422 761 aa11.41□□□□□ -0.58
COL4A4-201ENST00000396625 SLC9C1Q4G0N8 1177 aa11.41□□□□□ -0.58
COL4A4-201ENST00000396625 NUMA1Q14980 2115 aa11.4□□□□□ -0.58
COL4A4-201ENST00000396625 CYP7A1P22680 504 aa11.4□□□□□ -0.58
COL4A4-201ENST00000396625 ZNF622Q969S3 477 aaKnown RBP eCLIP11.4□□□□□ -0.58
COL4A4-201ENST00000396625 TEKT2Q9UIF3 430 aa11.4□□□□□ -0.58
COL4A4-201ENST00000396625 NPHP3Q7Z494 1330 aa11.4□□□□□ -0.58
COL4A4-201ENST00000396625 RAB3GAP1Q15042 981 aa11.4□□□□□ -0.58
COL4A4-201ENST00000396625 HOMER3Q9NSC5 361 aa11.4□□□□□ -0.58
COL4A4-201ENST00000396625 PCYT1AP49585 367 aa11.4□□□□□ -0.58
COL4A4-201ENST00000396625 CTAGE3PQ8IX95 158 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms