RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 KCNQ5Q9NR82 932 aa6.94□□□□□ -1.3
CMC1-202ENST00000396610 GFRA2O00451 464 aa6.93□□□□□ -1.3
CMC1-202ENST00000396610 TLR3O15455 904 aaKnown RBP6.93□□□□□ -1.3
CMC1-202ENST00000396610 RACK1P63244 317 aaKnown RBP6.93□□□□□ -1.3
CMC1-202ENST00000396610 ARTNQ5T4W7 220 aa6.93□□□□□ -1.3
CMC1-202ENST00000396610 PAOXQ6QHF9 649 aa6.93□□□□□ -1.3
CMC1-202ENST00000396610 FAM196AQ6ZSG2 479 aa6.93□□□□□ -1.3
CMC1-202ENST00000396610 ZNF296Q8WUU4 475 aaPredicted RBP6.93□□□□□ -1.3
CMC1-202ENST00000396610 SUPT16HQ9Y5B9 1047 aaKnown RBP6.93□□□□□ -1.3
CMC1-202ENST00000396610 SNCAIPQ9Y6H5 919 aa6.93□□□□□ -1.3
CMC1-202ENST00000396610 FANCGO15287 622 aa6.92□□□□□ -1.3
CMC1-202ENST00000396610 CRKP46108 304 aa6.92□□□□□ -1.3
CMC1-202ENST00000396610 MAP7Q14244 749 aa6.92□□□□□ -1.3
CMC1-202ENST00000396610 PRSS36Q5K4E3 855 aa6.92□□□□□ -1.3
CMC1-202ENST00000396610 KIAA0825Q8IV33 1275 aa6.92□□□□□ -1.3
CMC1-202ENST00000396610 SPON2Q9BUD6 331 aa6.92□□□□□ -1.3
CMC1-202ENST00000396610 PRKAG2Q9UGJ0 569 aa6.92□□□□□ -1.3
CMC1-202ENST00000396610 DDX41Q9UJV9 622 aaKnown RBP6.92□□□□□ -1.3
CMC1-202ENST00000396610 E9PSI1 815 aa6.91□□□□□ -1.3
CMC1-202ENST00000396610 GRK4P32298 578 aa6.91□□□□□ -1.3
CMC1-202ENST00000396610 ETF1P62495 437 aaKnown RBP6.91□□□□□ -1.3
CMC1-202ENST00000396610 RAD51AP2Q09MP3 1159 aa6.91□□□□□ -1.3
CMC1-202ENST00000396610 NFIAQ12857 509 aa6.91□□□□□ -1.3
CMC1-202ENST00000396610 CDK5R2Q13319 367 aa6.91□□□□□ -1.3
CMC1-202ENST00000396610 RNF43Q68DV7 783 aa6.91□□□□□ -1.3
CMC1-202ENST00000396610 SEZ6L2Q6UXD5 910 aa6.91□□□□□ -1.3
CMC1-202ENST00000396610 REC114Q7Z4M0 266 aa6.91□□□□□ -1.3
CMC1-202ENST00000396610 NBPF11Q86T75 865 aa6.91□□□□□ -1.3
CMC1-202ENST00000396610 MFSD14AQ96MC6 490 aa6.91□□□□□ -1.3
CMC1-202ENST00000396610 WNT10AQ9GZT5 417 aa6.91□□□□□ -1.3
CMC1-202ENST00000396610 FBRSQ9HAH7 460 aa6.91□□□□□ -1.3
CMC1-202ENST00000396610 SSU72Q9NP77 194 aaKnown RBP6.91□□□□□ -1.3
CMC1-202ENST00000396610 UBP1Q9NZI7 540 aa6.91□□□□□ -1.3
CMC1-202ENST00000396610 CORINQ9Y5Q5 1042 aa6.91□□□□□ -1.3
CMC1-202ENST00000396610 GREM1O60565 184 aa6.9□□□□□ -1.3
CMC1-202ENST00000396610 IGLV1-40P01703 118 aa6.9□□□□□ -1.3
CMC1-202ENST00000396610 ADMP35318 185 aa6.9□□□□□ -1.3
CMC1-202ENST00000396610 MPP2Q14168 576 aa6.9□□□□□ -1.3
CMC1-202ENST00000396610 DIEXFQ68CQ4 756 aaKnown RBP6.9□□□□□ -1.3
CMC1-202ENST00000396610 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.9□□□□□ -1.3
CMC1-202ENST00000396610 SHISA5Q8N114 240 aa6.9□□□□□ -1.3
CMC1-202ENST00000396610 FBXL6Q8N531 539 aa6.9□□□□□ -1.3
CMC1-202ENST00000396610 DBNDD2Q9BQY9 259 aa6.9□□□□□ -1.3
CMC1-202ENST00000396610 LRRC3Q9BY71 257 aa6.9□□□□□ -1.3
CMC1-202ENST00000396610 KRTAP9-2Q9BYQ4 174 aa6.9□□□□□ -1.3
CMC1-202ENST00000396610 C1GALT1Q9NS00 363 aa6.9□□□□□ -1.3
CMC1-202ENST00000396610 POLR3KQ9Y2Y1 108 aaPredicted RBP6.9□□□□□ -1.3
CMC1-202ENST00000396610 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.89□□□□□ -1.31
CMC1-202ENST00000396610 GRIN3BO60391 1043 aa6.89□□□□□ -1.31
CMC1-202ENST00000396610 APOBRQ0VD83 1088 aa6.89□□□□□ -1.31
CMC1-202ENST00000396610 CWF19L2Q2TBE0 894 aaKnown RBP6.89□□□□□ -1.31
CMC1-202ENST00000396610 ZNF654Q8IZM8 581 aa6.89□□□□□ -1.31
CMC1-202ENST00000396610 GATA6Q92908 595 aa6.89□□□□□ -1.31
CMC1-202ENST00000396610 EAF1Q96JC9 268 aaPredicted RBP6.89□□□□□ -1.31
CMC1-202ENST00000396610 TBC1D32Q96NH3 1257 aa6.89□□□□□ -1.31
CMC1-202ENST00000396610 PCOLCE2Q9UKZ9 415 aa6.89□□□□□ -1.31
CMC1-202ENST00000396610 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.89□□□□□ -1.31
CMC1-202ENST00000396610 GSC2O15499 205 aa6.88□□□□□ -1.31
CMC1-202ENST00000396610 F13BP05160 661 aa6.88□□□□□ -1.31
CMC1-202ENST00000396610 PGRP06401 933 aa6.88□□□□□ -1.31
CMC1-202ENST00000396610 NKG7Q16617 165 aa6.88□□□□□ -1.31
CMC1-202ENST00000396610 SEZ6Q53EL9 994 aa6.88□□□□□ -1.31
CMC1-202ENST00000396610 CDC37L1Q7L3B6 337 aa6.88□□□□□ -1.31
CMC1-202ENST00000396610 ARMCX6Q7L4S7 300 aa6.88□□□□□ -1.31
CMC1-202ENST00000396610 ZAR1Q86SH2 424 aa6.88□□□□□ -1.31
CMC1-202ENST00000396610 SHKBP1Q8TBC3 707 aa6.88□□□□□ -1.31
CMC1-202ENST00000396610 ZNF507Q8TCN5 953 aa6.88□□□□□ -1.31
CMC1-202ENST00000396610 CCSER2Q9H7U1 834 aa6.88□□□□□ -1.31
CMC1-202ENST00000396610 IGSF5Q9NSI5 407 aa6.88□□□□□ -1.31
CMC1-202ENST00000396610 TACC3Q9Y6A5 838 aa6.88□□□□□ -1.31
CMC1-202ENST00000396610 FAM170BA6NMN3 283 aa6.87□□□□□ -1.31
CMC1-202ENST00000396610 ERCC5P28715 1186 aaPredicted RBP6.87□□□□□ -1.31
CMC1-202ENST00000396610 PDE4BQ07343 736 aa6.87□□□□□ -1.31
CMC1-202ENST00000396610 PAK2Q13177 524 aa6.87□□□□□ -1.31
CMC1-202ENST00000396610 LRP8Q14114 963 aa6.87□□□□□ -1.31
CMC1-202ENST00000396610 SLBPQ14493 270 aaKnown RBP eCLIP6.87□□□□□ -1.31
CMC1-202ENST00000396610 ZDHHC13Q8IUH4 622 aa6.87□□□□□ -1.31
CMC1-202ENST00000396610 DPH2Q9BQC3 489 aaPredicted RBP6.87□□□□□ -1.31
CMC1-202ENST00000396610 NT5C1AQ9BXI3 368 aa6.87□□□□□ -1.31
CMC1-202ENST00000396610 ACBD3Q9H3P7 528 aa6.87□□□□□ -1.31
CMC1-202ENST00000396610 BRMS1Q9HCU9 246 aa6.87□□□□□ -1.31
CMC1-202ENST00000396610 KRTAP9-6A0A140TA67 174 aa6.86□□□□□ -1.31
CMC1-202ENST00000396610 WDR64B1ANS9 1081 aa6.86□□□□□ -1.31
CMC1-202ENST00000396610 HTR3BO95264 441 aa6.86□□□□□ -1.31
CMC1-202ENST00000396610 FAM87AP0C7U9 286 aa6.86□□□□□ -1.31
CMC1-202ENST00000396610 PLCG1P19174 1290 aa6.86□□□□□ -1.31
CMC1-202ENST00000396610 PRAMEF13Q5VWM6 474 aa6.86□□□□□ -1.31
CMC1-202ENST00000396610 HID1Q8IV36 788 aa6.86□□□□□ -1.31
CMC1-202ENST00000396610 TOP6BLQ8N6T0 577 aa6.86□□□□□ -1.31
CMC1-202ENST00000396610 KCT2Q8NC54 265 aa6.86□□□□□ -1.31
CMC1-202ENST00000396610 ACSF2Q96CM8 615 aaPredicted RBP6.86□□□□□ -1.31
CMC1-202ENST00000396610 TGIF2Q9GZN2 237 aa6.86□□□□□ -1.31
CMC1-202ENST00000396610 TJP2Q9UDY2 1190 aa6.86□□□□□ -1.31
CMC1-202ENST00000396610 ROBO2Q9HCK4 1378 aa6.85□□□□□ -1.31
CMC1-202ENST00000396610 LEFTY1O75610 366 aa6.85□□□□□ -1.31
CMC1-202ENST00000396610 LRIG2O94898 1065 aa6.85□□□□□ -1.31
CMC1-202ENST00000396610 ZNF765Q7L2R6 523 aa6.85□□□□□ -1.31
CMC1-202ENST00000396610 NKD1Q969G9 470 aa6.85□□□□□ -1.31
CMC1-202ENST00000396610 TMEM87BQ96K49 555 aa6.85□□□□□ -1.31
CMC1-202ENST00000396610 REV1Q9UBZ9 1251 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms