RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 TBX2Q13207 712 aaPredicted RBP18.05■□□□□ 0.48
HOXA3-202ENST00000396352 SPATA5Q8NB90 893 aa18.05■□□□□ 0.48
HOXA3-202ENST00000396352 LPIN2Q92539 896 aa18.05■□□□□ 0.48
HOXA3-202ENST00000396352 TRMT112Q9UI30 125 aaKnown RBP18.05■□□□□ 0.48
HOXA3-202ENST00000396352 FBXO2Q9UK22 296 aaPredicted RBP18.05■□□□□ 0.48
HOXA3-202ENST00000396352 PDE8AO60658 829 aa18.04■□□□□ 0.48
HOXA3-202ENST00000396352 FCHSD1Q86WN1 690 aa18.04■□□□□ 0.48
HOXA3-202ENST00000396352 SLC4A9Q96Q91 983 aa18.04■□□□□ 0.48
HOXA3-202ENST00000396352 NAPBQ9H115 298 aa18.04■□□□□ 0.48
HOXA3-202ENST00000396352 MAN1B1Q9UKM7 699 aa18.04■□□□□ 0.48
HOXA3-202ENST00000396352 NT5DC1Q5TFE4 455 aa18.04■□□□□ 0.48
HOXA3-202ENST00000396352 MAGEB6Q8N7X4 407 aa18.04■□□□□ 0.48
HOXA3-202ENST00000396352 HELBQ8NG08 1087 aaPredicted RBP18.04■□□□□ 0.48
HOXA3-202ENST00000396352 GSG1L2A8MUP6 293 aa18.04■□□□□ 0.48
HOXA3-202ENST00000396352 RASGRF1Q13972 1273 aa18.04■□□□□ 0.48
HOXA3-202ENST00000396352 AKNAD1Q5T1N1 836 aa18.04■□□□□ 0.48
HOXA3-202ENST00000396352 ARMT1Q9H993 441 aa18.04■□□□□ 0.48
HOXA3-202ENST00000396352 KCNJ14Q9UNX9 436 aa18.04■□□□□ 0.48
HOXA3-202ENST00000396352 PRR29P0C7W0 189 aa18.03■□□□□ 0.48
HOXA3-202ENST00000396352 CYP19A1P11511 503 aaPredicted RBP18.03■□□□□ 0.48
HOXA3-202ENST00000396352 POSTNQ15063 836 aa18.03■□□□□ 0.48
HOXA3-202ENST00000396352 DIS3L2Q8IYB7 885 aaKnown RBP18.03■□□□□ 0.48
HOXA3-202ENST00000396352 WASF1Q92558 559 aa18.03■□□□□ 0.48
HOXA3-202ENST00000396352 CNNM2Q9H8M5 875 aa18.03■□□□□ 0.48
HOXA3-202ENST00000396352 PLCH1Q4KWH8 1693 aa18.03■□□□□ 0.48
HOXA3-202ENST00000396352 ZNF18P17022 549 aa18.03■□□□□ 0.48
HOXA3-202ENST00000396352 PTPREP23469 700 aa18.03■□□□□ 0.48
HOXA3-202ENST00000396352 FMR1Q06787 632 aaKnown RBP eCLIP18.03■□□□□ 0.48
HOXA3-202ENST00000396352 MROH5Q6ZUA9 1318 aa18.03■□□□□ 0.48
HOXA3-202ENST00000396352 VWA3AA6NCI4 1184 aa18.03■□□□□ 0.48
HOXA3-202ENST00000396352 SARSP49591 514 aaKnown RBP18.03■□□□□ 0.48
HOXA3-202ENST00000396352 CLCN6P51797 869 aa18.03■□□□□ 0.48
HOXA3-202ENST00000396352 TERF2Q15554 542 aa18.03■□□□□ 0.48
HOXA3-202ENST00000396352 MYH6P13533 1939 aa18.02■□□□□ 0.48
HOXA3-202ENST00000396352 KRT23Q9C075 422 aa18.02■□□□□ 0.48
HOXA3-202ENST00000396352 FOXP1Q9H334 677 aaPredicted RBP18.02■□□□□ 0.48
HOXA3-202ENST00000396352 PARP3Q9Y6F1 533 aa18.02■□□□□ 0.48
HOXA3-202ENST00000396352 ARHGAP6O43182 974 aa18.02■□□□□ 0.47
HOXA3-202ENST00000396352 PRKAB2O43741 272 aa18.02■□□□□ 0.47
HOXA3-202ENST00000396352 ARHGAP29Q52LW3 1261 aa18.02■□□□□ 0.47
HOXA3-202ENST00000396352 HSP90AA4PQ58FG1 418 aa18.02■□□□□ 0.47
HOXA3-202ENST00000396352 STAG1Q8WVM7 1258 aa18.02■□□□□ 0.47
HOXA3-202ENST00000396352 ZBTB1Q9Y2K1 713 aa18.02■□□□□ 0.47
HOXA3-202ENST00000396352 MORC3Q14149 939 aa18.01■□□□□ 0.47
HOXA3-202ENST00000396352 MED15Q96RN5 788 aa18.01■□□□□ 0.47
HOXA3-202ENST00000396352 PPP2R2CQ9Y2T4 447 aa18.01■□□□□ 0.47
HOXA3-202ENST00000396352 FHOD1Q9Y613 1164 aa18.01■□□□□ 0.47
HOXA3-202ENST00000396352 SNAP23O00161 211 aa18.01■□□□□ 0.47
HOXA3-202ENST00000396352 POLR2DO15514 142 aaKnown RBP18.01■□□□□ 0.47
HOXA3-202ENST00000396352 MAP3K12Q12852 859 aa18.01■□□□□ 0.47
HOXA3-202ENST00000396352 MFSD6Q6ZSS7 791 aa18.01■□□□□ 0.47
HOXA3-202ENST00000396352 ZNF771Q7L3S4 317 aaPredicted RBP18.01■□□□□ 0.47
HOXA3-202ENST00000396352 ZKSCAN3Q9BRR0 538 aa18.01■□□□□ 0.47
HOXA3-202ENST00000396352 SERTAD1Q9UHV2 236 aa18.01■□□□□ 0.47
HOXA3-202ENST00000396352 PCDHB6Q9Y5E3 794 aa18.01■□□□□ 0.47
HOXA3-202ENST00000396352 EVA1CP58658 441 aa18.01■□□□□ 0.47
HOXA3-202ENST00000396352 RTN1Q16799 776 aa18.01■□□□□ 0.47
HOXA3-202ENST00000396352 RILPL1Q5EBL4 403 aa18.01■□□□□ 0.47
HOXA3-202ENST00000396352 ST7Q9NRC1 585 aa18.01■□□□□ 0.47
HOXA3-202ENST00000396352 HOOK1Q9UJC3 728 aaKnown RBP18.01■□□□□ 0.47
HOXA3-202ENST00000396352 NFE2L3Q9Y4A8 694 aa18.01■□□□□ 0.47
HOXA3-202ENST00000396352 BCL9O00512 1426 aa18■□□□□ 0.47
HOXA3-202ENST00000396352 NR5A1Q13285 461 aa18■□□□□ 0.47
HOXA3-202ENST00000396352 SAFBQ15424 915 aaKnown RBP eCLIP18■□□□□ 0.47
HOXA3-202ENST00000396352 LCORLQ8N3X6 602 aa18■□□□□ 0.47
HOXA3-202ENST00000396352 TC2NQ8N9U0 490 aa18■□□□□ 0.47
HOXA3-202ENST00000396352 ZSCAN12O43309 604 aa18■□□□□ 0.47
HOXA3-202ENST00000396352 TADA3O75528 432 aa18■□□□□ 0.47
HOXA3-202ENST00000396352 ZNF827Q17R98 1081 aa18■□□□□ 0.47
HOXA3-202ENST00000396352 GRAMD1CQ8IYS0 662 aa18■□□□□ 0.47
HOXA3-202ENST00000396352 CMTR1Q8N1G2 835 aaKnown RBP18■□□□□ 0.47
HOXA3-202ENST00000396352 CRACR2BQ8N4Y2 399 aaPredicted RBP18■□□□□ 0.47
HOXA3-202ENST00000396352 ZNF579Q8NAF0 562 aaKnown RBP18■□□□□ 0.47
HOXA3-202ENST00000396352 MLKLQ8NB16 471 aa18■□□□□ 0.47
HOXA3-202ENST00000396352 ACTN4O43707 911 aaKnown RBP17.99■□□□□ 0.47
HOXA3-202ENST00000396352 TRIM22Q8IYM9 498 aa17.99■□□□□ 0.47
HOXA3-202ENST00000396352 ENOX1Q8TC92 643 aaKnown RBP17.99■□□□□ 0.47
HOXA3-202ENST00000396352 BAG1Q99933 345 aaPredicted RBP17.99■□□□□ 0.47
HOXA3-202ENST00000396352 SEC31BQ9NQW1 1179 aa17.99■□□□□ 0.47
HOXA3-202ENST00000396352 SLC5A1P13866 664 aa17.99■□□□□ 0.47
HOXA3-202ENST00000396352 WTAPQ15007 396 aa17.99■□□□□ 0.47
HOXA3-202ENST00000396352 TRMT44Q8IYL2 757 aaKnown RBP17.99■□□□□ 0.47
HOXA3-202ENST00000396352 SRRTQ9BXP5 876 aaKnown RBP17.99■□□□□ 0.47
HOXA3-202ENST00000396352 PNPLA7Q6ZV29 1317 aa17.99■□□□□ 0.47
HOXA3-202ENST00000396352 DEXIO95424 95 aa17.99■□□□□ 0.47
HOXA3-202ENST00000396352 SPECC1LQ69YQ0 1117 aa17.99■□□□□ 0.47
HOXA3-202ENST00000396352 ZNF34Q8IZ26 560 aa17.99■□□□□ 0.47
HOXA3-202ENST00000396352 SPATA20Q8TB22 786 aa17.99■□□□□ 0.47
HOXA3-202ENST00000396352 OXER1Q8TDS5 423 aa17.99■□□□□ 0.47
HOXA3-202ENST00000396352 SRPRBQ9Y5M8 271 aaKnown RBP17.99■□□□□ 0.47
HOXA3-202ENST00000396352 URI1O94763 535 aaPredicted RBP17.98■□□□□ 0.47
HOXA3-202ENST00000396352 BMS1Q14692 1282 aaKnown RBP17.98■□□□□ 0.47
HOXA3-202ENST00000396352 RRP12Q5JTH9 1297 aaKnown RBP17.98■□□□□ 0.47
HOXA3-202ENST00000396352 SMARCE1Q969G3 411 aa17.98■□□□□ 0.47
HOXA3-202ENST00000396352 SHISA4Q96DD7 197 aa17.98■□□□□ 0.47
HOXA3-202ENST00000396352 ERVV-1B6SEH8 477 aa17.98■□□□□ 0.47
HOXA3-202ENST00000396352 STX10O60499 249 aa17.98■□□□□ 0.47
HOXA3-202ENST00000396352 ZRANB2O95218 330 aaKnown RBP eCLIP17.98■□□□□ 0.47
HOXA3-202ENST00000396352 TOGARAM2Q6ZUX3 1019 aa17.98■□□□□ 0.47
HOXA3-202ENST00000396352 USP49Q70CQ1 688 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms