RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 AATFQ9NY61 560 aaKnown RBP eCLIP20■□□□□ 0.79
DDR1-229ENST00000396342 TAOK2Q9UL54 1235 aa20■□□□□ 0.79
DDR1-229ENST00000396342 AK9Q5TCS8 1911 aa20■□□□□ 0.79
DDR1-229ENST00000396342 CAP2P40123 477 aa19.99■□□□□ 0.79
DDR1-229ENST00000396342 GCLCP48506 637 aaPredicted RBP19.99■□□□□ 0.79
DDR1-229ENST00000396342 SPP2Q13103 211 aa19.99■□□□□ 0.79
DDR1-229ENST00000396342 FOXP4Q8IVH2 680 aaPredicted RBP19.99■□□□□ 0.79
DDR1-229ENST00000396342 CCAR1Q8IX12 1150 aaKnown RBP19.99■□□□□ 0.79
DDR1-229ENST00000396342 ZNF512BQ96KM6 892 aaPredicted RBP19.99■□□□□ 0.79
DDR1-229ENST00000396342 DBNDD2Q9BQY9 259 aa19.99■□□□□ 0.79
DDR1-229ENST00000396342 HTATIP2Q9BUP3 242 aa19.99■□□□□ 0.79
DDR1-229ENST00000396342 RNF208Q9H0X6 261 aa19.99■□□□□ 0.79
DDR1-229ENST00000396342 TNNQ9UQP3 1299 aa19.99■□□□□ 0.79
DDR1-229ENST00000396342 LAMB1P07942 1786 aa19.98■□□□□ 0.79
DDR1-229ENST00000396342 RFX7Q2KHR2 1363 aa19.98■□□□□ 0.79
DDR1-229ENST00000396342 ASNSP08243 561 aa19.98■□□□□ 0.79
DDR1-229ENST00000396342 BCRP11274 1271 aa19.98■□□□□ 0.79
DDR1-229ENST00000396342 MOGSQ13724 837 aa19.98■□□□□ 0.79
DDR1-229ENST00000396342 TMED8Q6PL24 325 aaPredicted RBP19.98■□□□□ 0.79
DDR1-229ENST00000396342 SH3RF3Q8TEJ3 882 aaPredicted RBP19.98■□□□□ 0.79
DDR1-229ENST00000396342 C1orf115Q9H7X2 142 aa19.98■□□□□ 0.79
DDR1-229ENST00000396342 GINM1Q9NU53 330 aa19.98■□□□□ 0.79
DDR1-229ENST00000396342 ADCY3O60266 1144 aa19.97■□□□□ 0.79
DDR1-229ENST00000396342 IDH1O75874 414 aaKnown RBP19.97■□□□□ 0.79
DDR1-229ENST00000396342 IRX3P78415 501 aaPredicted RBP19.97■□□□□ 0.79
DDR1-229ENST00000396342 CAP1Q01518 475 aa19.97■□□□□ 0.79
DDR1-229ENST00000396342 PRKCZQ05513 592 aa19.97■□□□□ 0.79
DDR1-229ENST00000396342 MAP3K12Q12852 859 aa19.97■□□□□ 0.79
DDR1-229ENST00000396342 MAPKAPK5Q8IW41 473 aa19.97■□□□□ 0.79
DDR1-229ENST00000396342 TGFBRAP1Q8WUH2 860 aa19.97■□□□□ 0.79
DDR1-229ENST00000396342 DPF3Q92784 378 aa19.97■□□□□ 0.79
DDR1-229ENST00000396342 COL2A1P02458 1487 aaPredicted RBP19.97■□□□□ 0.79
DDR1-229ENST00000396342 FAM196BA6NMK8 535 aa19.96■□□□□ 0.79
DDR1-229ENST00000396342 HMMRO75330 724 aa19.96■□□□□ 0.79
DDR1-229ENST00000396342 CCL5P13501 91 aa19.96■□□□□ 0.79
DDR1-229ENST00000396342 CYP7A1P22680 504 aa19.96■□□□□ 0.79
DDR1-229ENST00000396342 USP5P45974 858 aa19.96■□□□□ 0.79
DDR1-229ENST00000396342 PPP4CP60510 307 aa19.96■□□□□ 0.79
DDR1-229ENST00000396342 ANKRD13CQ8N6S4 541 aa19.96■□□□□ 0.79
DDR1-229ENST00000396342 CWC22Q9HCG8 908 aaKnown RBP19.96■□□□□ 0.79
DDR1-229ENST00000396342 NOP58Q9Y2X3 529 aaKnown RBP19.96■□□□□ 0.79
DDR1-229ENST00000396342 ADGRA2Q96PE1 1338 aa19.96■□□□□ 0.79
DDR1-229ENST00000396342 GJB1P08034 283 aa19.95■□□□□ 0.78
DDR1-229ENST00000396342 HMGCS2P54868 508 aa19.95■□□□□ 0.78
DDR1-229ENST00000396342 FAM110CQ1W6H9 321 aa19.95■□□□□ 0.78
DDR1-229ENST00000396342 MIER1Q8N108 512 aa19.95■□□□□ 0.78
DDR1-229ENST00000396342 C19orf81C9J6K1 198 aa19.94■□□□□ 0.78
DDR1-229ENST00000396342 ZBTB7BO15156 539 aaPredicted RBP19.94■□□□□ 0.78
DDR1-229ENST00000396342 ZAP70P43403 619 aa19.94■□□□□ 0.78
DDR1-229ENST00000396342 FLT3LGP49771 235 aa19.94■□□□□ 0.78
DDR1-229ENST00000396342 TTF1Q15361 905 aaPredicted RBP19.94■□□□□ 0.78
DDR1-229ENST00000396342 PXYLP1Q8TE99 480 aa19.94■□□□□ 0.78
DDR1-229ENST00000396342 CCDC8Q9H0W5 538 aaPredicted RBP19.94■□□□□ 0.78
DDR1-229ENST00000396342 NR2E3Q9Y5X4 410 aa19.94■□□□□ 0.78
DDR1-229ENST00000396342 CYP2E1P05181 493 aaPredicted RBP19.93■□□□□ 0.78
DDR1-229ENST00000396342 AACSQ86V21 672 aa19.93■□□□□ 0.78
DDR1-229ENST00000396342 ZNF384Q8TF68 577 aa19.93■□□□□ 0.78
DDR1-229ENST00000396342 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.93■□□□□ 0.78
DDR1-229ENST00000396342 TFRCP02786 760 aaKnown RBP19.92■□□□□ 0.78
DDR1-229ENST00000396342 GJA8P48165 433 aa19.92■□□□□ 0.78
DDR1-229ENST00000396342 IRF5Q13568 498 aa19.92■□□□□ 0.78
DDR1-229ENST00000396342 MTFR1Q15390 333 aa19.92■□□□□ 0.78
DDR1-229ENST00000396342 TTC6Q86TZ1 520 aa19.92■□□□□ 0.78
DDR1-229ENST00000396342 CCDC84Q86UT8 332 aaPredicted RBP19.92■□□□□ 0.78
DDR1-229ENST00000396342 CLASRPQ8N2M8 674 aaKnown RBP19.92■□□□□ 0.78
DDR1-229ENST00000396342 GTF3C2Q8WUA4 911 aaPredicted RBP19.92■□□□□ 0.78
DDR1-229ENST00000396342 PALD1Q9ULE6 856 aa19.92■□□□□ 0.78
DDR1-229ENST00000396342 FLT1P17948 1338 aa19.92■□□□□ 0.78
DDR1-229ENST00000396342 ZBED9Q6R2W3 1325 aa19.92■□□□□ 0.78
DDR1-229ENST00000396342 MYH2Q9UKX2 1941 aa19.92■□□□□ 0.78
DDR1-229ENST00000396342 USP17L10C9JJH3 530 aa19.91■□□□□ 0.78
DDR1-229ENST00000396342 CTGFP29279 349 aa19.91■□□□□ 0.78
DDR1-229ENST00000396342 BACE1P56817 501 aa19.91■□□□□ 0.78
DDR1-229ENST00000396342 PDE3AQ14432 1141 aa19.91■□□□□ 0.78
DDR1-229ENST00000396342 HABP4Q5JVS0 413 aaKnown RBP19.91■□□□□ 0.78
DDR1-229ENST00000396342 TREML2Q5T2D2 321 aa19.91■□□□□ 0.78
DDR1-229ENST00000396342 FEZ1Q99689 392 aa19.91■□□□□ 0.78
DDR1-229ENST00000396342 WDR18Q9BV38 432 aa19.91■□□□□ 0.78
DDR1-229ENST00000396342 CABP5Q9NP86 173 aa19.91■□□□□ 0.78
DDR1-229ENST00000396342 SAP30BPQ9UHR5 308 aaKnown RBP19.91■□□□□ 0.78
DDR1-229ENST00000396342 DBNLQ9UJU6 430 aaKnown RBP19.91■□□□□ 0.78
DDR1-229ENST00000396342 IFIT2P09913 472 aaKnown RBP19.9■□□□□ 0.78
DDR1-229ENST00000396342 MTMR2Q13614 643 aa19.9■□□□□ 0.78
DDR1-229ENST00000396342 SH3D19Q5HYK7 790 aa19.9■□□□□ 0.78
DDR1-229ENST00000396342 CEP85Q6P2H3 762 aa19.9■□□□□ 0.78
DDR1-229ENST00000396342 MAGEB6Q8N7X4 407 aa19.9■□□□□ 0.78
DDR1-229ENST00000396342 U2AF1L4Q8WU68 220 aaKnown RBP19.9■□□□□ 0.78
DDR1-229ENST00000396342 ASCC2Q9H1I8 757 aaPredicted RBP19.9■□□□□ 0.78
DDR1-229ENST00000396342 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.9■□□□□ 0.78
DDR1-229ENST00000396342 GABRQQ9UN88 632 aa19.9■□□□□ 0.78
DDR1-229ENST00000396342 FARP2O94887 1054 aaPredicted RBP19.89■□□□□ 0.77
DDR1-229ENST00000396342 INHAP05111 366 aa19.89■□□□□ 0.77
DDR1-229ENST00000396342 SLURP2P0DP57 97 aa19.89■□□□□ 0.77
DDR1-229ENST00000396342 MIGA1Q8NAN2 632 aa19.89■□□□□ 0.77
DDR1-229ENST00000396342 EAF2Q96CJ1 260 aaPredicted RBP19.89■□□□□ 0.77
DDR1-229ENST00000396342 BCL11AQ9H165 835 aa19.89■□□□□ 0.77
DDR1-229ENST00000396342 PIH1D3Q9NQM4 214 aaKnown RBP19.89■□□□□ 0.77
DDR1-229ENST00000396342 DDX19BQ9UMR2 479 aa19.89■□□□□ 0.77
DDR1-229ENST00000396342 EXOC6BQ9Y2D4 811 aa19.89■□□□□ 0.77
DDR1-229ENST00000396342 KIAA0100Q14667 2235 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms