RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 CNOT7Q9UIV1 285 aaKnown RBP16.89■□□□□ 0.29
RTFDC1-203ENST00000395881 KLF18A0A0U1RQI7 1052 aa16.88■□□□□ 0.29
RTFDC1-203ENST00000395881 TDO2P48775 406 aa16.88■□□□□ 0.29
RTFDC1-203ENST00000395881 NT5C2P49902 561 aa16.88■□□□□ 0.29
RTFDC1-203ENST00000395881 ATL3Q6DD88 541 aa16.88■□□□□ 0.29
RTFDC1-203ENST00000395881 CHST3Q7LGC8 479 aa16.88■□□□□ 0.29
RTFDC1-203ENST00000395881 DPF2Q92785 391 aa16.88■□□□□ 0.29
RTFDC1-203ENST00000395881 NSUN4Q96CB9 384 aaKnown RBP16.88■□□□□ 0.29
RTFDC1-203ENST00000395881 IQSEC3Q9UPP2 1182 aaPredicted RBP16.88■□□□□ 0.29
RTFDC1-203ENST00000395881 USP17L3A6NCW0 530 aa16.87■□□□□ 0.29
RTFDC1-203ENST00000395881 USP17L4A6NCW7 530 aa16.87■□□□□ 0.29
RTFDC1-203ENST00000395881 H3BQV1 296 aa16.87■□□□□ 0.29
RTFDC1-203ENST00000395881 XRCC6P12956 609 aaKnown RBP eCLIP16.87■□□□□ 0.29
RTFDC1-203ENST00000395881 DNM1Q05193 864 aaKnown RBP16.87■□□□□ 0.29
RTFDC1-203ENST00000395881 IFFO2Q5TF58 517 aa16.87■□□□□ 0.29
RTFDC1-203ENST00000395881 MFSD6Q6ZSS7 791 aa16.87■□□□□ 0.29
RTFDC1-203ENST00000395881 USP17L1Q7RTZ2 530 aa16.87■□□□□ 0.29
RTFDC1-203ENST00000395881 WDR66Q8TBY9 1149 aa16.87■□□□□ 0.29
RTFDC1-203ENST00000395881 CD209Q9NNX6 404 aa16.87■□□□□ 0.29
RTFDC1-203ENST00000395881 ADARB2Q9NS39 739 aaKnown RBP16.87■□□□□ 0.29
RTFDC1-203ENST00000395881 BRPF3Q9ULD4 1205 aa16.87■□□□□ 0.29
RTFDC1-203ENST00000395881 HPS5Q9UPZ3 1129 aa16.87■□□□□ 0.29
RTFDC1-203ENST00000395881 CLEC11AQ9Y240 323 aa16.87■□□□□ 0.29
RTFDC1-203ENST00000395881 NID2Q14112 1375 aa16.87■□□□□ 0.29
RTFDC1-203ENST00000395881 GOLGA8BA8MQT2 603 aa16.86■□□□□ 0.29
RTFDC1-203ENST00000395881 RPS12P25398 132 aaKnown RBP16.86■□□□□ 0.29
RTFDC1-203ENST00000395881 RCAN1P53805 252 aa16.86■□□□□ 0.29
RTFDC1-203ENST00000395881 RESTQ13127 1097 aa16.86■□□□□ 0.29
RTFDC1-203ENST00000395881 RSBN1LQ6PCB5 846 aaPredicted RBP16.86■□□□□ 0.29
RTFDC1-203ENST00000395881 USP50Q70EL3 339 aaPredicted RBP16.86■□□□□ 0.29
RTFDC1-203ENST00000395881 ADGRA1Q86SQ6 560 aa16.86■□□□□ 0.29
RTFDC1-203ENST00000395881 MICALL2Q8IY33 904 aa16.86■□□□□ 0.29
RTFDC1-203ENST00000395881 TDRD7Q8NHU6 1098 aaKnown RBP16.86■□□□□ 0.29
RTFDC1-203ENST00000395881 IGDCC4Q8TDY8 1250 aa16.86■□□□□ 0.29
RTFDC1-203ENST00000395881 GMLQ99445 158 aa16.86■□□□□ 0.29
RTFDC1-203ENST00000395881 TMEM63CQ9P1W3 806 aa16.86■□□□□ 0.29
RTFDC1-203ENST00000395881 MYH15Q9Y2K3 1946 aa16.86■□□□□ 0.29
RTFDC1-203ENST00000395881 NEDD4P46934 1319 aa16.86■□□□□ 0.29
RTFDC1-203ENST00000395881 PRKAB2O43741 272 aa16.85■□□□□ 0.29
RTFDC1-203ENST00000395881 CDKL5O76039 1030 aa16.85■□□□□ 0.29
RTFDC1-203ENST00000395881 LETM1O95202 739 aaPredicted RBP16.85■□□□□ 0.29
RTFDC1-203ENST00000395881 HIRAP54198 1017 aaPredicted RBP16.85■□□□□ 0.29
RTFDC1-203ENST00000395881 CCT2P78371 535 aaKnown RBP16.85■□□□□ 0.29
RTFDC1-203ENST00000395881 DACT2Q5SW24 774 aa16.85■□□□□ 0.29
RTFDC1-203ENST00000395881 CYB5R4Q7L1T6 521 aa16.85■□□□□ 0.29
RTFDC1-203ENST00000395881 ZNF804AQ7Z570 1209 aa16.85■□□□□ 0.29
RTFDC1-203ENST00000395881 GAS2L3Q86XJ1 694 aa16.85■□□□□ 0.29
RTFDC1-203ENST00000395881 TMTC2Q8N394 836 aa16.85■□□□□ 0.29
RTFDC1-203ENST00000395881 MIGA1Q8NAN2 632 aa16.85■□□□□ 0.29
RTFDC1-203ENST00000395881 MXD3Q9BW11 206 aa16.85■□□□□ 0.29
RTFDC1-203ENST00000395881 CEP350Q5VT06 3117 aa16.85■□□□□ 0.29
RTFDC1-203ENST00000395881 B4E1Z4 1266 aa16.85■□□□□ 0.29
RTFDC1-203ENST00000395881 PPARAQ07869 468 aa16.85■□□□□ 0.29
RTFDC1-203ENST00000395881 SART3Q15020 963 aaKnown RBP16.85■□□□□ 0.29
RTFDC1-203ENST00000395881 CPLX2Q6PUV4 134 aaKnown RBP16.85■□□□□ 0.29
RTFDC1-203ENST00000395881 CERS3Q8IU89 383 aa16.85■□□□□ 0.29
RTFDC1-203ENST00000395881 TRPM4Q8TD43 1214 aa16.85■□□□□ 0.29
RTFDC1-203ENST00000395881 DDX11Q96FC9 970 aa16.85■□□□□ 0.29
RTFDC1-203ENST00000395881 GDPD2Q9HCC8 539 aa16.85■□□□□ 0.29
RTFDC1-203ENST00000395881 CFAP45Q9UL16 551 aa16.85■□□□□ 0.29
RTFDC1-203ENST00000395881 POLR2AP24928 1970 aaKnown RBP16.84■□□□□ 0.29
RTFDC1-203ENST00000395881 H7C1D1 291 aa16.84■□□□□ 0.29
RTFDC1-203ENST00000395881 FIBPO43427 364 aa16.84■□□□□ 0.29
RTFDC1-203ENST00000395881 GADD45BO75293 160 aaPredicted RBP16.84■□□□□ 0.29
RTFDC1-203ENST00000395881 ITGBL1O95965 494 aaPredicted RBP16.84■□□□□ 0.29
RTFDC1-203ENST00000395881 EGFRP00533 1210 aa16.84■□□□□ 0.29
RTFDC1-203ENST00000395881 FGRP09769 529 aa16.84■□□□□ 0.29
RTFDC1-203ENST00000395881 IL1R1P14778 569 aa16.84■□□□□ 0.29
RTFDC1-203ENST00000395881 MECOMQ03112 1051 aa16.84■□□□□ 0.29
RTFDC1-203ENST00000395881 FOXD4L6Q3SYB3 417 aaPredicted RBP16.84■□□□□ 0.29
RTFDC1-203ENST00000395881 STRIP1Q5VSL9 837 aa16.84■□□□□ 0.29
RTFDC1-203ENST00000395881 MAP1SQ66K74 1059 aaPredicted RBP16.84■□□□□ 0.29
RTFDC1-203ENST00000395881 APOA5Q6Q788 366 aa16.84■□□□□ 0.29
RTFDC1-203ENST00000395881 LRSAM1Q6UWE0 723 aa16.84■□□□□ 0.29
RTFDC1-203ENST00000395881 FOXD4L3Q6VB84 417 aaPredicted RBP16.84■□□□□ 0.29
RTFDC1-203ENST00000395881 SAMD7Q7Z3H4 446 aa16.84■□□□□ 0.29
RTFDC1-203ENST00000395881 AGBL3Q8NEM8 1001 aa16.84■□□□□ 0.29
RTFDC1-203ENST00000395881 ZNF384Q8TF68 577 aa16.84■□□□□ 0.29
RTFDC1-203ENST00000395881 LY9Q9HBG7 655 aa16.84■□□□□ 0.29
RTFDC1-203ENST00000395881 NCOA5Q9HCD5 579 aaKnown RBP16.84■□□□□ 0.29
RTFDC1-203ENST00000395881 GPHNQ9NQX3 736 aaPredicted RBP16.84■□□□□ 0.29
RTFDC1-203ENST00000395881 ZSWIM5Q9P217 1185 aa16.84■□□□□ 0.29
RTFDC1-203ENST00000395881 CPLX1O14810 134 aa16.83■□□□□ 0.28
RTFDC1-203ENST00000395881 FDPSP14324 419 aaKnown RBP16.83■□□□□ 0.28
RTFDC1-203ENST00000395881 GTF2IP78347 998 aa16.83■□□□□ 0.28
RTFDC1-203ENST00000395881 FBXW7Q969H0 707 aa16.83■□□□□ 0.28
RTFDC1-203ENST00000395881 CRNKL1Q9BZJ0 848 aaKnown RBP16.83■□□□□ 0.28
RTFDC1-203ENST00000395881 ATP8A2Q9NTI2 1148 aa16.83■□□□□ 0.28
RTFDC1-203ENST00000395881 NAP1L2Q9ULW6 460 aaPredicted RBP16.83■□□□□ 0.28
RTFDC1-203ENST00000395881 LAMB1P07942 1786 aa16.82■□□□□ 0.28
RTFDC1-203ENST00000395881 KDM4AO75164 1064 aa16.82■□□□□ 0.28
RTFDC1-203ENST00000395881 GSTO1P78417 241 aa16.82■□□□□ 0.28
RTFDC1-203ENST00000395881 CTDSPL2Q05D32 466 aa16.82■□□□□ 0.28
RTFDC1-203ENST00000395881 TBC1D10BQ4KMP7 808 aaPredicted RBP16.82■□□□□ 0.28
RTFDC1-203ENST00000395881 TMEM67Q5HYA8 995 aa16.82■□□□□ 0.28
RTFDC1-203ENST00000395881 CCDC183Q5T5S1 534 aa16.82■□□□□ 0.28
RTFDC1-203ENST00000395881 FERMT3Q86UX7 667 aa16.82■□□□□ 0.28
RTFDC1-203ENST00000395881 IFIT3O14879 490 aaKnown RBP16.81■□□□□ 0.28
RTFDC1-203ENST00000395881 ZBTB43O43298 467 aa16.81■□□□□ 0.28
RTFDC1-203ENST00000395881 METAP2P50579 478 aaKnown RBP eCLIP16.81■□□□□ 0.283e-6■■□□□ 14.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms