RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 ENAHQ8N8S7 591 aaPredicted RBP20.72■□□□□ 0.91
SREBF1-204ENST00000395756 USP17L8P0C7I0 530 aa20.72■□□□□ 0.91
SREBF1-204ENST00000395756 HS1BP3Q53T59 392 aa20.72■□□□□ 0.91
SREBF1-204ENST00000395756 ENGASEQ8NFI3 743 aa20.72■□□□□ 0.91
SREBF1-204ENST00000395756 KCNG4Q8TDN1 519 aa20.71■□□□□ 0.91
SREBF1-204ENST00000395756 PRDM10Q9NQV6 1147 aa20.71■□□□□ 0.91
SREBF1-204ENST00000395756 ATL3Q6DD88 541 aa20.71■□□□□ 0.91
SREBF1-204ENST00000395756 ZSCAN10Q96SZ4 725 aaPredicted RBP20.71■□□□□ 0.91
SREBF1-204ENST00000395756 DCP1AQ9NPI6 582 aaPredicted RBP20.71■□□□□ 0.91
SREBF1-204ENST00000395756 POLR3EQ9NVU0 708 aa20.71■□□□□ 0.91
SREBF1-204ENST00000395756 GRAPQ13588 217 aa20.7■□□□□ 0.9
SREBF1-204ENST00000395756 DIS3L2Q8IYB7 885 aaKnown RBP20.7■□□□□ 0.9
SREBF1-204ENST00000395756 GRAPLQ8TC17 118 aaPredicted RBP20.7■□□□□ 0.9
SREBF1-204ENST00000395756 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.7■□□□□ 0.9
SREBF1-204ENST00000395756 FMNL1O95466 1100 aaPredicted RBP20.7■□□□□ 0.9
SREBF1-204ENST00000395756 SERPINB2P05120 415 aa20.7■□□□□ 0.9
SREBF1-204ENST00000395756 CRNKL1Q9BZJ0 848 aaKnown RBP20.7■□□□□ 0.9
SREBF1-204ENST00000395756 IFNAR1P17181 557 aa20.7■□□□□ 0.9
SREBF1-204ENST00000395756 FMR1NBQ8N0W7 255 aaPredicted RBP20.7■□□□□ 0.9
SREBF1-204ENST00000395756 OXER1Q8TDS5 423 aa20.7■□□□□ 0.9
SREBF1-204ENST00000395756 V9GY48 417 aaPredicted RBP20.7■□□□□ 0.9
SREBF1-204ENST00000395756 PLEKHA8P1O95397 391 aa20.69■□□□□ 0.9
SREBF1-204ENST00000395756 GYS1P13807 737 aa20.69■□□□□ 0.9
SREBF1-204ENST00000395756 USP5P45974 858 aa20.69■□□□□ 0.9
SREBF1-204ENST00000395756 AKAP17AQ02040 695 aaKnown RBP20.69■□□□□ 0.9
SREBF1-204ENST00000395756 IQCA1Q86XH1 822 aa20.69■□□□□ 0.9
SREBF1-204ENST00000395756 CRACR2BQ8N4Y2 399 aaPredicted RBP20.69■□□□□ 0.9
SREBF1-204ENST00000395756 DYNLL2Q96FJ2 89 aa20.69■□□□□ 0.9
SREBF1-204ENST00000395756 VPS54Q9P1Q0 977 aa20.69■□□□□ 0.9
SREBF1-204ENST00000395756 BECN2A8MW95 431 aa20.69■□□□□ 0.9
SREBF1-204ENST00000395756 UFL1O94874 794 aa20.69■□□□□ 0.9
SREBF1-204ENST00000395756 CERKQ8TCT0 537 aa20.69■□□□□ 0.9
SREBF1-204ENST00000395756 GOLGA6L19H0YKK7 550 aa20.68■□□□□ 0.9
SREBF1-204ENST00000395756 ZNF202O95125 648 aa20.68■□□□□ 0.9
SREBF1-204ENST00000395756 LDHBP07195 334 aaKnown RBP20.68■□□□□ 0.9
SREBF1-204ENST00000395756 GPSM2P81274 684 aa20.68■□□□□ 0.9
SREBF1-204ENST00000395756 SAFBQ15424 915 aaKnown RBP eCLIP20.68■□□□□ 0.9
SREBF1-204ENST00000395756 ZRSR1Q15695 479 aaKnown RBP20.68■□□□□ 0.9
SREBF1-204ENST00000395756 RBM43Q6ZSC3 357 aaKnown RBP20.68■□□□□ 0.9
SREBF1-204ENST00000395756 YEATS4O95619 227 aa20.68■□□□□ 0.9
SREBF1-204ENST00000395756 PFKFB1P16118 471 aa20.68■□□□□ 0.9
SREBF1-204ENST00000395756 SAP30BPQ9UHR5 308 aaKnown RBP20.68■□□□□ 0.9
SREBF1-204ENST00000395756 TSPY2A6NKD2 308 aa20.67■□□□□ 0.9
SREBF1-204ENST00000395756 DNTTIP2Q5QJE6 756 aaKnown RBP20.67■□□□□ 0.9
SREBF1-204ENST00000395756 TMTC2Q8N394 836 aa20.67■□□□□ 0.9
SREBF1-204ENST00000395756 NRBP1Q9UHY1 535 aa20.67■□□□□ 0.9
SREBF1-204ENST00000395756 R3HCC1Q9Y3T6 440 aaKnown RBP20.67■□□□□ 0.9
SREBF1-204ENST00000395756 SLC39A14Q15043 492 aa20.67■□□□□ 0.9
SREBF1-204ENST00000395756 SEC23AQ15436 765 aa20.67■□□□□ 0.9
SREBF1-204ENST00000395756 CATIPQ7Z7H3 387 aa20.67■□□□□ 0.9
SREBF1-204ENST00000395756 BRIP1Q9BX63 1249 aa20.67■□□□□ 0.9
SREBF1-204ENST00000395756 AXDND1Q5T1B0 1012 aaPredicted RBP20.67■□□□□ 0.9
SREBF1-204ENST00000395756 SH3RF3Q8TEJ3 882 aaPredicted RBP20.67■□□□□ 0.9
SREBF1-204ENST00000395756 CABP5Q9NP86 173 aa20.67■□□□□ 0.9
SREBF1-204ENST00000395756 C6orf229H3BNL8 230 aa20.66■□□□□ 0.9
SREBF1-204ENST00000395756 RIMBP2O15034 1052 aa20.66■□□□□ 0.9
SREBF1-204ENST00000395756 TGFBRAP1Q8WUH2 860 aa20.66■□□□□ 0.9
SREBF1-204ENST00000395756 COL5A3P25940 1745 aaPredicted RBP20.66■□□□□ 0.9
SREBF1-204ENST00000395756 MROH7-TTC4A0A0A0MT08 1334 aa20.66■□□□□ 0.9
SREBF1-204ENST00000395756 CCDC196A0A1B0GTZ2 297 aa20.66■□□□□ 0.9
SREBF1-204ENST00000395756 SEMA3EO15041 775 aa20.66■□□□□ 0.9
SREBF1-204ENST00000395756 TPM2P07951 284 aa20.66■□□□□ 0.9
SREBF1-204ENST00000395756 KIAA2012Q0VF49 1180 aa20.66■□□□□ 0.9
SREBF1-204ENST00000395756 OLFM4Q6UX06 510 aa20.66■□□□□ 0.9
SREBF1-204ENST00000395756 NBPF11Q86T75 865 aa20.66■□□□□ 0.9
SREBF1-204ENST00000395756 FAM13BQ9NYF5 915 aa20.66■□□□□ 0.9
SREBF1-204ENST00000395756 BTAF1O14981 1849 aa20.66■□□□□ 0.9
SREBF1-204ENST00000395756 FAM205CA6NFA0 338 aa20.65■□□□□ 0.9
SREBF1-204ENST00000395756 NOSTRINQ8IVI9 506 aa20.65■□□□□ 0.9
SREBF1-204ENST00000395756 MMP1P03956 469 aa20.65■□□□□ 0.9
SREBF1-204ENST00000395756 GRIN1Q05586 938 aa20.65■□□□□ 0.9
SREBF1-204ENST00000395756 STX1AQ16623 288 aa20.65■□□□□ 0.9
SREBF1-204ENST00000395756 MAPKAPK5Q8IW41 473 aa20.65■□□□□ 0.9
SREBF1-204ENST00000395756 SLC44A5Q8NCS7 719 aa20.65■□□□□ 0.9
SREBF1-204ENST00000395756 BAZ2BQ9UIF8 2168 aaKnown RBP20.65■□□□□ 0.9
SREBF1-204ENST00000395756 CTAGE5O15320 804 aa20.64■□□□□ 0.9
SREBF1-204ENST00000395756 DEXIO95424 95 aa20.64■□□□□ 0.9
SREBF1-204ENST00000395756 PTGS1P23219 599 aa20.64■□□□□ 0.9
SREBF1-204ENST00000395756 ST5P78524 1137 aa20.64■□□□□ 0.9
SREBF1-204ENST00000395756 ANAPC4Q9UJX5 808 aa20.64■□□□□ 0.9
SREBF1-204ENST00000395756 SHC4Q6S5L8 630 aa20.64■□□□□ 0.89
SREBF1-204ENST00000395756 KRT27Q7Z3Y8 459 aa20.64■□□□□ 0.89
SREBF1-204ENST00000395756 WASF1Q92558 559 aa20.64■□□□□ 0.89
SREBF1-204ENST00000395756 RREB1Q92766 1687 aa20.64■□□□□ 0.89
SREBF1-204ENST00000395756 F8W031 263 aaPredicted RBP20.64■□□□□ 0.89
SREBF1-204ENST00000395756 SLC3A2P08195 630 aaKnown RBP20.64■□□□□ 0.89
SREBF1-204ENST00000395756 SYKP43405 635 aa20.64■□□□□ 0.89
SREBF1-204ENST00000395756 XDHP47989 1333 aa20.64■□□□□ 0.89
SREBF1-204ENST00000395756 AOPEPQ8N6M6 819 aa20.64■□□□□ 0.89
SREBF1-204ENST00000395756 CICQ96RK0 1608 aaPredicted RBP20.63■□□□□ 0.89
SREBF1-204ENST00000395756 A0A1W2PQ27 194 aa20.63■□□□□ 0.89
SREBF1-204ENST00000395756 A0A1W2PQ64 194 aa20.63■□□□□ 0.89
SREBF1-204ENST00000395756 A0A1W2PQD8 194 aa20.63■□□□□ 0.89
SREBF1-204ENST00000395756 U2AF2P26368 475 aaKnown RBP eCLIP20.63■□□□□ 0.89
SREBF1-204ENST00000395756 DPCR1Q3MIW9 517 aa20.63■□□□□ 0.89
SREBF1-204ENST00000395756 CCDC186Q7Z3E2 898 aa20.63■□□□□ 0.89
SREBF1-204ENST00000395756 PDILTQ8N807 584 aa20.63■□□□□ 0.89
SREBF1-204ENST00000395756 PCDHB6Q9Y5E3 794 aa20.63■□□□□ 0.89
SREBF1-204ENST00000395756 TOB1P50616 345 aaPredicted RBP20.63■□□□□ 0.89
SREBF1-204ENST00000395756 MAP3K14Q99558 947 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms