RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 GABPAQ06546 454 aa17.86■□□□□ 0.45
PTPN20-206ENST00000395722 NBPF9Q3BBW0 867 aa17.86■□□□□ 0.45
PTPN20-206ENST00000395722 C16orf86Q6ZW13 317 aa17.86■□□□□ 0.45
PTPN20-206ENST00000395722 DHX36Q9H2U1 1008 aaKnown RBP17.86■□□□□ 0.45
PTPN20-206ENST00000395722 TMOD2Q9NZR1 351 aa17.86■□□□□ 0.45
PTPN20-206ENST00000395722 TAOK2Q9UL54 1235 aa17.86■□□□□ 0.45
PTPN20-206ENST00000395722 CNTNAP1P78357 1384 aa17.86■□□□□ 0.45
PTPN20-206ENST00000395722 PRC1O43663 620 aa17.86■□□□□ 0.45
PTPN20-206ENST00000395722 PDE4BQ07343 736 aa17.86■□□□□ 0.45
PTPN20-206ENST00000395722 ANKRD1Q15327 319 aa17.86■□□□□ 0.45
PTPN20-206ENST00000395722 SH3BP5LQ7L8J4 393 aa17.86■□□□□ 0.45
PTPN20-206ENST00000395722 DYNLL2Q96FJ2 89 aa17.86■□□□□ 0.45
PTPN20-206ENST00000395722 MTA3Q9BTC8 594 aa17.86■□□□□ 0.45
PTPN20-206ENST00000395722 EHD4Q9H223 541 aa17.86■□□□□ 0.45
PTPN20-206ENST00000395722 SRCAPQ6ZRS2 3230 aa17.85■□□□□ 0.45
PTPN20-206ENST00000395722 CLRN2A0PK11 232 aa17.85■□□□□ 0.45
PTPN20-206ENST00000395722 H7C1D1 291 aa17.85■□□□□ 0.45
PTPN20-206ENST00000395722 KDM4AO75164 1064 aa17.85■□□□□ 0.45
PTPN20-206ENST00000395722 DDNO94850 711 aaPredicted RBP17.85■□□□□ 0.45
PTPN20-206ENST00000395722 Q6ZUG5 572 aa17.85■□□□□ 0.45
PTPN20-206ENST00000395722 SAMD7Q7Z3H4 446 aa17.85■□□□□ 0.45
PTPN20-206ENST00000395722 ZSWIM5Q9P217 1185 aa17.85■□□□□ 0.45
PTPN20-206ENST00000395722 MYO1BO43795 1136 aa17.84■□□□□ 0.45
PTPN20-206ENST00000395722 KIF4BQ2VIQ3 1234 aa17.84■□□□□ 0.45
PTPN20-206ENST00000395722 SLC4A8Q2Y0W8 1093 aa17.84■□□□□ 0.45
PTPN20-206ENST00000395722 FAM83AQ86UY5 434 aa17.84■□□□□ 0.45
PTPN20-206ENST00000395722 ESR2Q92731 530 aa17.84■□□□□ 0.45
PTPN20-206ENST00000395722 L3MBTL3Q96JM7 780 aaPredicted RBP17.84■□□□□ 0.45
PTPN20-206ENST00000395722 LIMCH1Q9UPQ0 1083 aa17.84■□□□□ 0.45
PTPN20-206ENST00000395722 EVCP57679 992 aa17.84■□□□□ 0.45
PTPN20-206ENST00000395722 TCP10Q12799 353 aa17.84■□□□□ 0.45
PTPN20-206ENST00000395722 CHST3Q7LGC8 479 aa17.84■□□□□ 0.45
PTPN20-206ENST00000395722 METTL16Q86W50 562 aaKnown RBP17.84■□□□□ 0.45
PTPN20-206ENST00000395722 STK11IPQ8N1F8 1099 aa17.84■□□□□ 0.45
PTPN20-206ENST00000395722 FAM151AQ8WW52 585 aa17.84■□□□□ 0.45
PTPN20-206ENST00000395722 TMX3Q96JJ7 454 aa17.84■□□□□ 0.45
PTPN20-206ENST00000395722 DDTLA6NHG4 134 aaPredicted RBP17.83■□□□□ 0.44
PTPN20-206ENST00000395722 PRDM1O75626 825 aa17.83■□□□□ 0.44
PTPN20-206ENST00000395722 HLA-DOAP06340 250 aa17.83■□□□□ 0.44
PTPN20-206ENST00000395722 SLC4A3P48751 1232 aa17.83■□□□□ 0.44
PTPN20-206ENST00000395722 CDK8P49336 464 aa17.83■□□□□ 0.44
PTPN20-206ENST00000395722 TBC1D10BQ4KMP7 808 aaPredicted RBP17.83■□□□□ 0.44
PTPN20-206ENST00000395722 RRP12Q5JTH9 1297 aaKnown RBP17.83■□□□□ 0.44
PTPN20-206ENST00000395722 TMEM87BQ96K49 555 aa17.83■□□□□ 0.44
PTPN20-206ENST00000395722 LRRC2Q9BYS8 371 aa17.83■□□□□ 0.44
PTPN20-206ENST00000395722 SH2B2O14492 632 aaPredicted RBP17.82■□□□□ 0.44
PTPN20-206ENST00000395722 EPS15P42566 896 aa17.82■□□□□ 0.44
PTPN20-206ENST00000395722 SLC44A5Q8NCS7 719 aa17.82■□□□□ 0.44
PTPN20-206ENST00000395722 TRPM4Q8TD43 1214 aa17.82■□□□□ 0.44
PTPN20-206ENST00000395722 IGDCC4Q8TDY8 1250 aa17.82■□□□□ 0.44
PTPN20-206ENST00000395722 ZNF287Q9HBT7 754 aa17.82■□□□□ 0.44
PTPN20-206ENST00000395722 TOMM22Q9NS69 142 aa17.82■□□□□ 0.44
PTPN20-206ENST00000395722 PGAP2Q9UHJ9 254 aa17.82■□□□□ 0.44
PTPN20-206ENST00000395722 SERPINB13Q9UIV8 391 aa17.82■□□□□ 0.44
PTPN20-206ENST00000395722 TPCN1Q9ULQ1 816 aa17.82■□□□□ 0.44
PTPN20-206ENST00000395722 TCP10L2B9ZVM9 353 aa17.82■□□□□ 0.44
PTPN20-206ENST00000395722 RASA1P20936 1047 aa17.82■□□□□ 0.44
PTPN20-206ENST00000395722 CUL4AQ13619 759 aa17.82■□□□□ 0.44
PTPN20-206ENST00000395722 RBM26Q5T8P6 1007 aaKnown RBP17.82■□□□□ 0.44
PTPN20-206ENST00000395722 DPY19L2Q6NUT2 758 aa17.82■□□□□ 0.44
PTPN20-206ENST00000395722 ZSCAN31Q96LW9 406 aaPredicted RBP17.82■□□□□ 0.44
PTPN20-206ENST00000395722 GPHNQ9NQX3 736 aaPredicted RBP17.82■□□□□ 0.44
PTPN20-206ENST00000395722 PI4KBQ9UBF8 816 aa17.82■□□□□ 0.44
PTPN20-206ENST00000395722 SWAP70Q9UH65 585 aa17.82■□□□□ 0.44
PTPN20-206ENST00000395722 BRF1Q92994 677 aa17.81■□□□□ 0.44
PTPN20-206ENST00000395722 VEZTQ9HBM0 779 aa17.81■□□□□ 0.44
PTPN20-206ENST00000395722 ANGEL1Q9UNK9 670 aaKnown RBP17.81■□□□□ 0.44
PTPN20-206ENST00000395722 LIFRP42702 1097 aa17.8■□□□□ 0.44
PTPN20-206ENST00000395722 NOL8Q76FK4 1167 aaKnown RBP17.8■□□□□ 0.44
PTPN20-206ENST00000395722 FOXP4Q8IVH2 680 aaPredicted RBP17.8■□□□□ 0.44
PTPN20-206ENST00000395722 SH2B1Q9NRF2 756 aaPredicted RBP17.8■□□□□ 0.44
PTPN20-206ENST00000395722 GLTPD2A6NH11 291 aa17.8■□□□□ 0.44
PTPN20-206ENST00000395722 RANBP6O60518 1105 aaKnown RBP17.8■□□□□ 0.44
PTPN20-206ENST00000395722 LARGE1O95461 756 aa17.8■□□□□ 0.44
PTPN20-206ENST00000395722 LMOD1P29536 600 aaPredicted RBP17.8■□□□□ 0.44
PTPN20-206ENST00000395722 HIRAP54198 1017 aaPredicted RBP17.8■□□□□ 0.44
PTPN20-206ENST00000395722 SEC23AQ15436 765 aa17.8■□□□□ 0.44
PTPN20-206ENST00000395722 ME3Q16798 604 aa17.8■□□□□ 0.44
PTPN20-206ENST00000395722 SGMS1Q86VZ5 419 aa17.8■□□□□ 0.44
PTPN20-206ENST00000395722 LARP6Q9BRS8 491 aaKnown RBP17.8■□□□□ 0.44
PTPN20-206ENST00000395722 DNAJC18Q9H819 358 aa17.8■□□□□ 0.44
PTPN20-206ENST00000395722 LY9Q9HBG7 655 aa17.8■□□□□ 0.44
PTPN20-206ENST00000395722 MKNK2Q9HBH9 465 aa17.8■□□□□ 0.44
PTPN20-206ENST00000395722 ADARB2Q9NS39 739 aaKnown RBP17.8■□□□□ 0.44
PTPN20-206ENST00000395722 DAXXQ9UER7 740 aaPredicted RBP17.8■□□□□ 0.44
PTPN20-206ENST00000395722 ASTN2O75129 1339 aaPredicted RBP17.8■□□□□ 0.44
PTPN20-206ENST00000395722 SHMT1P34896 483 aa17.79■□□□□ 0.44
PTPN20-206ENST00000395722 FGD1P98174 961 aa17.79■□□□□ 0.44
PTPN20-206ENST00000395722 TNFAIP1Q13829 316 aa17.79■□□□□ 0.44
PTPN20-206ENST00000395722 TCP11L1Q9NUJ3 509 aa17.79■□□□□ 0.44
PTPN20-206ENST00000395722 HACL1Q9UJ83 578 aa17.79■□□□□ 0.44
PTPN20-206ENST00000395722 PLIN4Q96Q06 1357 aa17.79■□□□□ 0.44
PTPN20-206ENST00000395722 IFIT3O14879 490 aaKnown RBP17.79■□□□□ 0.44
PTPN20-206ENST00000395722 TNNI2P48788 182 aa17.79■□□□□ 0.44
PTPN20-206ENST00000395722 TMEM67Q5HYA8 995 aa17.79■□□□□ 0.44
PTPN20-206ENST00000395722 ZSCAN29Q8IWY8 852 aaPredicted RBP17.79■□□□□ 0.44
PTPN20-206ENST00000395722 ZNF274Q96GC6 653 aaPredicted RBP17.79■□□□□ 0.44
PTPN20-206ENST00000395722 ZSCAN10Q96SZ4 725 aaPredicted RBP17.79■□□□□ 0.44
PTPN20-206ENST00000395722 WDR90Q96KV7 1748 aa17.78■□□□□ 0.44
PTPN20-206ENST00000395722 MYH8P13535 1937 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms