RNA–Protein interactions for RNA: ENST00000395305.7

HLA-DMA-203, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-203ENST00000395305 BTBD19C9JJ37 291 aa16.96■□□□□ 0.31
HLA-DMA-203ENST00000395305 PKN2Q16513 984 aaKnown RBP16.96■□□□□ 0.31
HLA-DMA-203ENST00000395305 EDC3Q96F86 508 aaKnown RBP16.96■□□□□ 0.31
HLA-DMA-203ENST00000395305 RIOK1Q9BRS2 568 aaKnown RBP16.96■□□□□ 0.31
HLA-DMA-203ENST00000395305 AFG3L2Q9Y4W6 797 aa16.96■□□□□ 0.31
HLA-DMA-203ENST00000395305 ZHX2Q9Y6X8 837 aa16.96■□□□□ 0.31
HLA-DMA-203ENST00000395305 MAGEB6P1A0A0J9YX57 407 aa16.95■□□□□ 0.3
HLA-DMA-203ENST00000395305 TCRBV5S4A2TA0A5A2 114 aa16.95■□□□□ 0.3
HLA-DMA-203ENST00000395305 USP5P45974 858 aa16.95■□□□□ 0.3
HLA-DMA-203ENST00000395305 TAF1CQ15572 869 aaPredicted RBP16.95■□□□□ 0.3
HLA-DMA-203ENST00000395305 PALD1Q9ULE6 856 aa16.95■□□□□ 0.3
HLA-DMA-203ENST00000395305 ZNF532Q9HCE3 1301 aa16.95■□□□□ 0.3
HLA-DMA-203ENST00000395305 FAM196BA6NMK8 535 aa16.94■□□□□ 0.3
HLA-DMA-203ENST00000395305 CAP2P40123 477 aa16.94■□□□□ 0.3
HLA-DMA-203ENST00000395305 MOGSQ13724 837 aa16.94■□□□□ 0.3
HLA-DMA-203ENST00000395305 ANKRD23Q86SG2 305 aa16.94■□□□□ 0.3
HLA-DMA-203ENST00000395305 GPATCH3Q96I76 525 aa16.94■□□□□ 0.3
HLA-DMA-203ENST00000395305 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.94■□□□□ 0.3
HLA-DMA-203ENST00000395305 CDK5RAP2Q96SN8 1893 aa16.94■□□□□ 0.3
HLA-DMA-203ENST00000395305 FOCADQ5VW36 1801 aa16.93■□□□□ 0.3
HLA-DMA-203ENST00000395305 HLA-DOAP06340 250 aa16.93■□□□□ 0.3
HLA-DMA-203ENST00000395305 SP3Q02447 781 aa16.93■□□□□ 0.3
HLA-DMA-203ENST00000395305 FASTKD5Q7L8L6 764 aaKnown RBP16.93■□□□□ 0.3
HLA-DMA-203ENST00000395305 ERO1AQ96HE7 468 aa16.93■□□□□ 0.3
HLA-DMA-203ENST00000395305 SAP30BPQ9UHR5 308 aaKnown RBP16.93■□□□□ 0.3
HLA-DMA-203ENST00000395305 A0A0G2JLL6 359 aaPredicted RBP16.92■□□□□ 0.3
HLA-DMA-203ENST00000395305 TLR2O60603 784 aa16.92■□□□□ 0.3
HLA-DMA-203ENST00000395305 ADD2P35612 726 aa16.92■□□□□ 0.3
HLA-DMA-203ENST00000395305 HDAC1Q13547 482 aaPredicted RBP16.92■□□□□ 0.3
HLA-DMA-203ENST00000395305 RRP1BQ14684 758 aaKnown RBP16.92■□□□□ 0.3
HLA-DMA-203ENST00000395305 ZSCAN25Q6NSZ9 544 aa16.92■□□□□ 0.3
HLA-DMA-203ENST00000395305 PRRT2Q7Z6L0 340 aaPredicted RBP16.92■□□□□ 0.3
HLA-DMA-203ENST00000395305 TTC6Q86TZ1 520 aa16.92■□□□□ 0.3
HLA-DMA-203ENST00000395305 CRACR2BQ8N4Y2 399 aaPredicted RBP16.92■□□□□ 0.3
HLA-DMA-203ENST00000395305 TBC1D2Q9BYX2 928 aa16.92■□□□□ 0.3
HLA-DMA-203ENST00000395305 CRNKL1Q9BZJ0 848 aaKnown RBP16.92■□□□□ 0.3
HLA-DMA-203ENST00000395305 CCDC85CA6NKD9 419 aa16.91■□□□□ 0.3
HLA-DMA-203ENST00000395305 PDHXO00330 501 aa16.91■□□□□ 0.3
HLA-DMA-203ENST00000395305 UBE3CQ15386 1083 aa16.91■□□□□ 0.3
HLA-DMA-203ENST00000395305 GPAT2Q6NUI2 795 aa16.91■□□□□ 0.3
HLA-DMA-203ENST00000395305 GCC1Q96CN9 775 aa16.91■□□□□ 0.3
HLA-DMA-203ENST00000395305 TRIM34Q9BYJ4 488 aa16.91■□□□□ 0.3
HLA-DMA-203ENST00000395305 GINM1Q9NU53 330 aa16.91■□□□□ 0.3
HLA-DMA-203ENST00000395305 USP17L5A8MUK1 530 aa16.9■□□□□ 0.3
HLA-DMA-203ENST00000395305 ARHGEF6Q15052 776 aa16.9■□□□□ 0.3
HLA-DMA-203ENST00000395305 EHD4Q9H223 541 aa16.9■□□□□ 0.3
HLA-DMA-203ENST00000395305 DNAJC18Q9H819 358 aa16.9■□□□□ 0.3
HLA-DMA-203ENST00000395305 DOCK1Q14185 1865 aa16.9■□□□□ 0.3
HLA-DMA-203ENST00000395305 TTC41PQ6P2S7 1318 aa16.9■□□□□ 0.3
HLA-DMA-203ENST00000395305 MYH1P12882 1939 aa16.9■□□□□ 0.3
HLA-DMA-203ENST00000395305 TRIM75PA6NK02 468 aa16.89■□□□□ 0.29
HLA-DMA-203ENST00000395305 ASNSP08243 561 aa16.89■□□□□ 0.29
HLA-DMA-203ENST00000395305 SPP2Q13103 211 aa16.89■□□□□ 0.29
HLA-DMA-203ENST00000395305 TATDN1Q6P1N9 297 aa16.89■□□□□ 0.29
HLA-DMA-203ENST00000395305 FBXO46Q6PJ61 603 aaPredicted RBP16.89■□□□□ 0.29
HLA-DMA-203ENST00000395305 ZNF280CQ8ND82 737 aa16.89■□□□□ 0.29
HLA-DMA-203ENST00000395305 CD99L2Q8TCZ2 262 aa16.89■□□□□ 0.29
HLA-DMA-203ENST00000395305 WDR18Q9BV38 432 aa16.89■□□□□ 0.29
HLA-DMA-203ENST00000395305 ZBTB47Q9UFB7 747 aaPredicted RBP16.89■□□□□ 0.29
HLA-DMA-203ENST00000395305 SERPINB13Q9UIV8 391 aa16.89■□□□□ 0.29
HLA-DMA-203ENST00000395305 SLC45A1Q9Y2W3 748 aa16.89■□□□□ 0.29
HLA-DMA-203ENST00000395305 SUPT16HQ9Y5B9 1047 aaKnown RBP16.89■□□□□ 0.29
HLA-DMA-203ENST00000395305 PHIPQ8WWQ0 1821 aa16.89■□□□□ 0.29
HLA-DMA-203ENST00000395305 ERC2O15083 957 aa16.88■□□□□ 0.29
HLA-DMA-203ENST00000395305 POLR3DP05423 398 aaPredicted RBP16.88■□□□□ 0.29
HLA-DMA-203ENST00000395305 SLFNL1Q499Z3 407 aa16.88■□□□□ 0.29
HLA-DMA-203ENST00000395305 ANKRD45Q5TZF3 282 aa16.88■□□□□ 0.29
HLA-DMA-203ENST00000395305 C17orf99Q6UX52 265 aa16.88■□□□□ 0.29
HLA-DMA-203ENST00000395305 GADL1Q6ZQY3 521 aa16.88■□□□□ 0.29
HLA-DMA-203ENST00000395305 OTOP1Q7RTM1 612 aa16.88■□□□□ 0.29
HLA-DMA-203ENST00000395305 CCDC84Q86UT8 332 aaPredicted RBP16.88■□□□□ 0.29
HLA-DMA-203ENST00000395305 LCORLQ8N3X6 602 aa16.88■□□□□ 0.29
HLA-DMA-203ENST00000395305 KBTBD3Q8NAB2 608 aa16.88■□□□□ 0.29
HLA-DMA-203ENST00000395305 RWDD1Q9H446 243 aaPredicted RBP16.88■□□□□ 0.29
HLA-DMA-203ENST00000395305 ARMT1Q9H993 441 aa16.88■□□□□ 0.29
HLA-DMA-203ENST00000395305 AS3MTQ9HBK9 375 aa16.88■□□□□ 0.29
HLA-DMA-203ENST00000395305 ATP8A2Q9NTI2 1148 aa16.88■□□□□ 0.29
HLA-DMA-203ENST00000395305 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.88■□□□□ 0.29
HLA-DMA-203ENST00000395305 TRIM17Q9Y577 477 aa16.88■□□□□ 0.29
HLA-DMA-203ENST00000395305 SIPA1L1O43166 1804 aa16.88■□□□□ 0.29
HLA-DMA-203ENST00000395305 GLRX3O76003 335 aaKnown RBP16.87■□□□□ 0.29
HLA-DMA-203ENST00000395305 PLCD1P51178 756 aa16.87■□□□□ 0.29
HLA-DMA-203ENST00000395305 JAG1P78504 1218 aa16.87■□□□□ 0.29
HLA-DMA-203ENST00000395305 SLC4A8Q2Y0W8 1093 aa16.87■□□□□ 0.29
HLA-DMA-203ENST00000395305 TSHZ3Q63HK5 1081 aa16.87■□□□□ 0.29
HLA-DMA-203ENST00000395305 PROCA1Q8NCQ7 364 aaPredicted RBP16.87■□□□□ 0.29
HLA-DMA-203ENST00000395305 EFCC1Q9HA90 598 aa16.87■□□□□ 0.29
HLA-DMA-203ENST00000395305 DCP1AQ9NPI6 582 aaPredicted RBP16.87■□□□□ 0.29
HLA-DMA-203ENST00000395305 MCM9Q9NXL9 1143 aa16.87■□□□□ 0.29
HLA-DMA-203ENST00000395305 HPS5Q9UPZ3 1129 aa16.87■□□□□ 0.29
HLA-DMA-203ENST00000395305 MBD4O95243 580 aa16.86■□□□□ 0.29
HLA-DMA-203ENST00000395305 KIF22Q14807 665 aa16.86■□□□□ 0.29
HLA-DMA-203ENST00000395305 SH3D19Q5HYK7 790 aa16.86■□□□□ 0.29
HLA-DMA-203ENST00000395305 EXOC6Q8TAG9 804 aa16.86■□□□□ 0.29
HLA-DMA-203ENST00000395305 PI4K2BQ8TCG2 481 aa16.86■□□□□ 0.29
HLA-DMA-203ENST00000395305 SDR42E1Q8WUS8 393 aa16.86■□□□□ 0.29
HLA-DMA-203ENST00000395305 PARK7Q99497 189 aaKnown RBP16.86■□□□□ 0.29
HLA-DMA-203ENST00000395305 TAOK2Q9UL54 1235 aa16.86■□□□□ 0.29
HLA-DMA-203ENST00000395305 AGTPBP1Q9UPW5 1226 aa16.86■□□□□ 0.29
HLA-DMA-203ENST00000395305 ATAD5Q96QE3 1844 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms