RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 TUBB4BP68371 445 aa13.26□□□□□ -0.29
UBE2D3-209ENST00000394804 ZNF569Q5MCW4 686 aa13.26□□□□□ -0.29
UBE2D3-209ENST00000394804 ATG9AQ7Z3C6 839 aa13.26□□□□□ -0.29
UBE2D3-209ENST00000394804 FCHSD1Q86WN1 690 aa13.26□□□□□ -0.29
UBE2D3-209ENST00000394804 IQUBQ8NA54 791 aa13.26□□□□□ -0.29
UBE2D3-209ENST00000394804 BPIFA3Q9BQP9 254 aa13.26□□□□□ -0.29
UBE2D3-209ENST00000394804 GJB4Q9NTQ9 266 aa13.26□□□□□ -0.29
UBE2D3-209ENST00000394804 BTBD18B2RXH4 712 aa13.26□□□□□ -0.29
UBE2D3-209ENST00000394804 LMAN1P49257 510 aa13.26□□□□□ -0.29
UBE2D3-209ENST00000394804 IFNL3Q8IZI9 196 aa13.26□□□□□ -0.29
UBE2D3-209ENST00000394804 PPP2R2CQ9Y2T4 447 aa13.26□□□□□ -0.29
UBE2D3-209ENST00000394804 PEAK1Q9H792 1746 aa13.26□□□□□ -0.29
UBE2D3-209ENST00000394804 MCM6Q14566 821 aa13.25□□□□□ -0.29
UBE2D3-209ENST00000394804 NAA30Q147X3 362 aaPredicted RBP13.25□□□□□ -0.29
UBE2D3-209ENST00000394804 CCDC181Q5TID7 509 aa13.25□□□□□ -0.29
UBE2D3-209ENST00000394804 AIFM3Q96NN9 605 aa13.25□□□□□ -0.29
UBE2D3-209ENST00000394804 CRACR2AQ9BSW2 395 aa13.25□□□□□ -0.29
UBE2D3-209ENST00000394804 MKNK2Q9HBH9 465 aa13.25□□□□□ -0.29
UBE2D3-209ENST00000394804 SYNRGQ9UMZ2 1314 aa13.25□□□□□ -0.29
UBE2D3-209ENST00000394804 SH2B2O14492 632 aaPredicted RBP13.25□□□□□ -0.29
UBE2D3-209ENST00000394804 PDE4BQ07343 736 aa13.25□□□□□ -0.29
UBE2D3-209ENST00000394804 BICDL1Q6ZP65 573 aa13.25□□□□□ -0.29
UBE2D3-209ENST00000394804 MB21D2Q8IYB1 491 aaPredicted RBP13.25□□□□□ -0.29
UBE2D3-209ENST00000394804 TRIML1Q8N9V2 468 aa13.25□□□□□ -0.29
UBE2D3-209ENST00000394804 MROH5Q6ZUA9 1318 aa13.25□□□□□ -0.29
UBE2D3-209ENST00000394804 PPP2R5BQ15173 497 aa13.25□□□□□ -0.29
UBE2D3-209ENST00000394804 SPA17Q15506 151 aa13.25□□□□□ -0.29
UBE2D3-209ENST00000394804 GREM2Q9H772 168 aa13.25□□□□□ -0.29
UBE2D3-209ENST00000394804 PUF60Q9UHX1 559 aaKnown RBP13.25□□□□□ -0.29
UBE2D3-209ENST00000394804 DDX41Q9UJV9 622 aaKnown RBP13.25□□□□□ -0.29
UBE2D3-209ENST00000394804 CTDNEP1O95476 244 aa13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 ATP1A3P13637 1013 aa13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 STAT6P42226 847 aa13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 USP5P45974 858 aa13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 ADKP55263 362 aaKnown RBP13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 FKBP15Q5T1M5 1219 aa13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 TRIM47Q96LD4 638 aa13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 CRNKL1Q9BZJ0 848 aaKnown RBP13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 TCHHQ07283 1943 aa13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 VWA3AA6NCI4 1184 aa13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 EFCAB8A8MWE9 144 aa13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 PDE8BO95263 885 aa13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 EPS15P42566 896 aa13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 PHKA1P46020 1223 aa13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 DZIP1Q86YF9 867 aaKnown RBP13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 TSPYL1Q9H0U9 437 aa13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 LUC7LQ9NQ29 371 aaKnown RBP13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 RBM28Q9NW13 759 aaKnown RBP13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 BTG4Q9NY30 223 aa13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 PHLPP2Q6ZVD8 1323 aa13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 ZNF827Q17R98 1081 aa13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 AHDC1Q5TGY3 1603 aaPredicted RBP13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 FBXO38Q6PIJ6 1188 aa13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 TRERF1Q96PN7 1200 aa13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 KAT14Q9H8E8 782 aa13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 WDR19Q8NEZ3 1342 aa13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 ZNF174Q15697 407 aa13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 ANKRD18AQ8IVF6 992 aa13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 ZNF654Q8IZM8 581 aa13.24□□□□□ -0.29
UBE2D3-209ENST00000394804 MAP3K15Q6ZN16 1313 aa13.23□□□□□ -0.29
UBE2D3-209ENST00000394804 STX10O60499 249 aa13.23□□□□□ -0.29
UBE2D3-209ENST00000394804 MTIF2P46199 727 aaKnown RBP13.23□□□□□ -0.29
UBE2D3-209ENST00000394804 CCZ1BP86790 482 aa13.23□□□□□ -0.29
UBE2D3-209ENST00000394804 CCZ1P86791 482 aaPredicted RBP13.23□□□□□ -0.29
UBE2D3-209ENST00000394804 GIGYF2Q6Y7W6 1299 aaKnown RBP13.23□□□□□ -0.29
UBE2D3-209ENST00000394804 EHBP1Q8NDI1 1231 aa13.23□□□□□ -0.29
UBE2D3-209ENST00000394804 TANGO6Q9C0B7 1094 aa13.23□□□□□ -0.29
UBE2D3-209ENST00000394804 NBPF26B4DH59 902 aa13.23□□□□□ -0.29
UBE2D3-209ENST00000394804 G3V3G9 751 aa13.23□□□□□ -0.29
UBE2D3-209ENST00000394804 RAD21O60216 631 aa13.23□□□□□ -0.29
UBE2D3-209ENST00000394804 CALML3P27482 149 aa13.23□□□□□ -0.29
UBE2D3-209ENST00000394804 CCT6AP40227 531 aaKnown RBP13.23□□□□□ -0.29
UBE2D3-209ENST00000394804 DCAF8Q5TAQ9 597 aa13.23□□□□□ -0.29
UBE2D3-209ENST00000394804 NBPF14Q5TI25 921 aa13.23□□□□□ -0.29
UBE2D3-209ENST00000394804 NBPF10Q6P3W6 841 aaKnown RBP13.23□□□□□ -0.29
UBE2D3-209ENST00000394804 NBPF15Q8N660 670 aa13.23□□□□□ -0.29
UBE2D3-209ENST00000394804 TCP11L1Q9NUJ3 509 aa13.23□□□□□ -0.29
UBE2D3-209ENST00000394804 NIP7Q9Y221 180 aaKnown RBP eCLIP13.23□□□□□ -0.29
UBE2D3-209ENST00000394804 COL16A1Q07092 1604 aaPredicted RBP13.23□□□□□ -0.29
UBE2D3-209ENST00000394804 NHSL1Q5SYE7 1610 aa13.23□□□□□ -0.29
UBE2D3-209ENST00000394804 CHMP4BP1P59074 171 aa13.23□□□□□ -0.29
UBE2D3-209ENST00000394804 FAM193AP78312 1265 aa13.23□□□□□ -0.29
UBE2D3-209ENST00000394804 VSTM4Q8IW00 320 aa13.23□□□□□ -0.29
UBE2D3-209ENST00000394804 GPR161Q8N6U8 529 aaKnown RBP13.23□□□□□ -0.29
UBE2D3-209ENST00000394804 ENGASEQ8NFI3 743 aa13.23□□□□□ -0.29
UBE2D3-209ENST00000394804 V9GY48 417 aaPredicted RBP13.23□□□□□ -0.29
UBE2D3-209ENST00000394804 PSMA7O14818 248 aa13.22□□□□□ -0.29
UBE2D3-209ENST00000394804 FERMT2Q96AC1 680 aa13.22□□□□□ -0.29
UBE2D3-209ENST00000394804 NAA15Q9BXJ9 866 aaKnown RBP13.22□□□□□ -0.29
UBE2D3-209ENST00000394804 TTF2Q9UNY4 1162 aaKnown RBP13.22□□□□□ -0.29
UBE2D3-209ENST00000394804 TUBB2AQ13885 445 aa13.22□□□□□ -0.29
UBE2D3-209ENST00000394804 TUBB2BQ9BVA1 445 aa13.22□□□□□ -0.29
UBE2D3-209ENST00000394804 TMX4Q9H1E5 349 aaPredicted RBP13.22□□□□□ -0.29
UBE2D3-209ENST00000394804 CTNND2Q9UQB3 1225 aa13.22□□□□□ -0.29
UBE2D3-209ENST00000394804 WDR17Q8IZU2 1322 aa13.22□□□□□ -0.29
UBE2D3-209ENST00000394804 USO1O60763 962 aaKnown RBP13.22□□□□□ -0.29
UBE2D3-209ENST00000394804 TUBBP07437 444 aa13.22□□□□□ -0.29
UBE2D3-209ENST00000394804 TRIM21P19474 475 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms