RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 CCDC170Q8IYT3 715 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 TTC25Q96NG3 672 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 ADPGKQ9BRR6 497 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 ZFYVE9O95405 1425 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 CCDC169A6NNP5 214 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 HAND2P61296 217 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 TTLL7Q6ZT98 887 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 DZIP3Q86Y13 1208 aaKnown RBP8.25□□□□□ -1.09
SYNE2-205ENST00000394768 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.25□□□□□ -1.093e-8■■■■■ 70.6
SYNE2-205ENST00000394768 CLGNO14967 610 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 MCM7P33993 719 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 OPTNQ96CV9 577 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 CAPZA3Q96KX2 299 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 TNRQ92752 1358 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 F8W031 263 aaPredicted RBP8.24□□□□□ -1.09
SYNE2-205ENST00000394768 RARSP54136 660 aaKnown RBP8.24□□□□□ -1.09
SYNE2-205ENST00000394768 ZBTB17Q13105 803 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 LRRC59Q96AG4 307 aaKnown RBP8.24□□□□□ -1.09
SYNE2-205ENST00000394768 ABCC5O15440 1437 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 TOPBP1Q92547 1522 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 RFC1P35251 1148 aaPredicted RBP8.24□□□□□ -1.09
SYNE2-205ENST00000394768 AKAP4Q5JQC9 854 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 IFT122Q9HBG6 1241 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 ANAPC5Q9UJX4 755 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 ZNF233A6NK53 670 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 ZEB2O60315 1214 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 MCM6Q14566 821 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 THEGQ9P2T0 379 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 NSFL1CQ9UNZ2 370 aaKnown RBP8.24□□□□□ -1.09
SYNE2-205ENST00000394768 ATP8B3O60423 1300 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 DEXIO95424 95 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 CASC4Q6P4E1 433 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 CEP57Q86XR8 500 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 GPATCH11Q8N954 259 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 ZBTB21Q9ULJ3 1066 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 PI4KAP2A4QPH2 592 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 H0YIN7 160 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 EVCP57679 992 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 NIM1KQ8IY84 436 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 PI4KAP1Q8N8J0 262 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 IFT81Q8WYA0 676 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 DRC3Q9H069 523 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.24□□□□□ -1.09
SYNE2-205ENST00000394768 KRT9P35527 623 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 GTF2A1P52655 376 aaPredicted RBP8.24□□□□□ -1.09
SYNE2-205ENST00000394768 DBN1Q16643 649 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 RPGRIP1Q96KN7 1286 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 FAM81BQ96LP2 452 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 TRAF5O00463 557 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 XPAP23025 273 aaPredicted RBP8.24□□□□□ -1.09
SYNE2-205ENST00000394768 ZBTB8OSQ8IWT0 167 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 RUNDC3BQ96NL0 473 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 DONSONQ9NYP3 566 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 PPARGP37231 505 aaPredicted RBP8.24□□□□□ -1.09
SYNE2-205ENST00000394768 C8orf74Q6P047 294 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 GTF3C6Q969F1 213 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 TMEM87BQ96K49 555 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 PLCH2O75038 1416 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 ASXL1Q8IXJ9 1541 aa8.24□□□□□ -1.09
SYNE2-205ENST00000394768 THAP12O43422 761 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 C8orf37Q96NL8 207 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 JPH2Q9BR39 696 aaPredicted RBP8.23□□□□□ -1.09
SYNE2-205ENST00000394768 RNF113AO15541 343 aaKnown RBP8.23□□□□□ -1.09
SYNE2-205ENST00000394768 PTGS1P23219 599 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 KSR2Q6VAB6 950 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 RPS6KC1Q96S38 1066 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 MARCKSP29966 332 aaPredicted RBP8.23□□□□□ -1.09
SYNE2-205ENST00000394768 PRPSAP1Q14558 356 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 ANO6Q4KMQ2 910 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 RBSNQ9H1K0 784 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 MIS18AQ9NYP9 233 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 CAPN9O14815 690 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 PANK2Q9BZ23 570 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 ASIC2Q16515 512 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 NOC4LQ9BVI4 516 aaKnown RBP8.23□□□□□ -1.09
SYNE2-205ENST00000394768 TYW1Q9NV66 732 aaKnown RBP8.23□□□□□ -1.09
SYNE2-205ENST00000394768 CCDC87Q9NVE4 849 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 GUCA1BQ9UMX6 200 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 PPFIA4O75335 1185 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 IFNA8P32881 189 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 PCK1P35558 622 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 KPNA2P52292 529 aaKnown RBP8.23□□□□□ -1.09
SYNE2-205ENST00000394768 CCDC122Q5T0U0 273 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 ANKRD20A3Q5VUR7 823 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 USP48Q86UV5 1035 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 MAGEB6Q8N7X4 407 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 HELLSQ9NRZ9 838 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 DNM3Q9UQ16 869 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 UHRF1BP1LA0JNW5 1464 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 RPRD2Q5VT52 1461 aaKnown RBP8.23□□□□□ -1.09
SYNE2-205ENST00000394768 AKR1B15C9JRZ8 316 aaPredicted RBP8.23□□□□□ -1.09
SYNE2-205ENST00000394768 SLC4A8Q2Y0W8 1093 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 TEX11Q8IYF3 940 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 BRF1Q92994 677 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 DHX58Q96C10 678 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 EPS15L1Q9UBC2 864 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 RSPH14Q9UHP6 348 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 GGA1Q9UJY5 639 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 ARHGEF11O15085 1522 aa8.23□□□□□ -1.09
SYNE2-205ENST00000394768 CCNT1O60563 726 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms