RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 SENP2Q9HC62 589 aa23.87■■□□□ 1.41
HDDC3-202ENST00000394272 GJB2P29033 226 aa23.87■■□□□ 1.41
HDDC3-202ENST00000394272 NT5C2P49902 561 aa23.87■■□□□ 1.41
HDDC3-202ENST00000394272 DDX4Q9NQI0 724 aaKnown RBP23.87■■□□□ 1.41
HDDC3-202ENST00000394272 HPS5Q9UPZ3 1129 aa23.87■■□□□ 1.41
HDDC3-202ENST00000394272 ZDHHC9Q9Y397 364 aa23.87■■□□□ 1.41
HDDC3-202ENST00000394272 CXCL9Q07325 125 aa23.86■■□□□ 1.41
HDDC3-202ENST00000394272 SART3Q15020 963 aaKnown RBP23.86■■□□□ 1.41
HDDC3-202ENST00000394272 JDP2Q8WYK2 163 aa23.86■■□□□ 1.41
HDDC3-202ENST00000394272 TNPO1Q92973 898 aaKnown RBP23.86■■□□□ 1.41
HDDC3-202ENST00000394272 FHDC1Q9C0D6 1143 aaPredicted RBP23.86■■□□□ 1.41
HDDC3-202ENST00000394272 RANBP6O60518 1105 aaKnown RBP23.85■■□□□ 1.41
HDDC3-202ENST00000394272 CCT2P78371 535 aaKnown RBP23.85■■□□□ 1.41
HDDC3-202ENST00000394272 DYNLL2Q96FJ2 89 aa23.85■■□□□ 1.41
HDDC3-202ENST00000394272 ZKSCAN3Q9BRR0 538 aa23.85■■□□□ 1.41
HDDC3-202ENST00000394272 LLPHQ9BRT6 129 aaKnown RBP23.85■■□□□ 1.41
HDDC3-202ENST00000394272 GOLGA8BA8MQT2 603 aa23.85■■□□□ 1.41
HDDC3-202ENST00000394272 PRELPP51888 382 aa23.85■■□□□ 1.41
HDDC3-202ENST00000394272 RBM5P52756 815 aaKnown RBP eCLIP23.85■■□□□ 1.41
HDDC3-202ENST00000394272 RASSF7Q02833 373 aa23.85■■□□□ 1.41
HDDC3-202ENST00000394272 PICALMQ13492 652 aa23.85■■□□□ 1.41
HDDC3-202ENST00000394272 NFKBIBQ15653 356 aa23.85■■□□□ 1.41
HDDC3-202ENST00000394272 APOA5Q6Q788 366 aa23.85■■□□□ 1.41
HDDC3-202ENST00000394272 AGBL3Q8NEM8 1001 aa23.85■■□□□ 1.41
HDDC3-202ENST00000394272 NAP1L2Q9ULW6 460 aaPredicted RBP23.85■■□□□ 1.41
HDDC3-202ENST00000394272 DTNBO60941 627 aa23.84■■□□□ 1.41
HDDC3-202ENST00000394272 SEC23AQ15436 765 aa23.84■■□□□ 1.41
HDDC3-202ENST00000394272 CFAP100Q494V2 611 aa23.84■■□□□ 1.41
HDDC3-202ENST00000394272 SMARCC2Q8TAQ2 1214 aa23.84■■□□□ 1.41
HDDC3-202ENST00000394272 UBAC1Q9BSL1 405 aa23.84■■□□□ 1.41
HDDC3-202ENST00000394272 NCOA5Q9HCD5 579 aaKnown RBP23.84■■□□□ 1.41
HDDC3-202ENST00000394272 ZBTB12Q9Y330 459 aaPredicted RBP23.84■■□□□ 1.41
HDDC3-202ENST00000394272 BRD1O95696 1058 aa23.83■■□□□ 1.41
HDDC3-202ENST00000394272 NFIAQ12857 509 aa23.83■■□□□ 1.41
HDDC3-202ENST00000394272 WTAPQ15007 396 aa23.83■■□□□ 1.41
HDDC3-202ENST00000394272 C16orf86Q6ZW13 317 aa23.83■■□□□ 1.41
HDDC3-202ENST00000394272 CHMP4CQ96CF2 233 aa23.83■■□□□ 1.41
HDDC3-202ENST00000394272 IDI2Q9BXS1 227 aa23.83■■□□□ 1.41
HDDC3-202ENST00000394272 OSBPL5Q9H0X9 879 aaPredicted RBP23.83■■□□□ 1.41
HDDC3-202ENST00000394272 TNKSO95271 1327 aa23.83■■□□□ 1.41
HDDC3-202ENST00000394272 ERICH2A1L162 156 aa23.83■■□□□ 1.4
HDDC3-202ENST00000394272 CTDNEP1O95476 244 aa23.83■■□□□ 1.4
HDDC3-202ENST00000394272 CIAPIN1Q6FI81 312 aa23.83■■□□□ 1.4
HDDC3-202ENST00000394272 IQCA1Q86XH1 822 aa23.83■■□□□ 1.4
HDDC3-202ENST00000394272 TMTC2Q8N394 836 aa23.83■■□□□ 1.4
HDDC3-202ENST00000394272 NSUN7Q8NE18 718 aaKnown RBP23.83■■□□□ 1.4
HDDC3-202ENST00000394272 ZSCAN10Q96SZ4 725 aaPredicted RBP23.83■■□□□ 1.4
HDDC3-202ENST00000394272 JAK2O60674 1132 aa23.82■■□□□ 1.4
HDDC3-202ENST00000394272 NPM3O75607 178 aaKnown RBP23.82■■□□□ 1.4
HDDC3-202ENST00000394272 SYT1P21579 422 aa23.81■■□□□ 1.4
HDDC3-202ENST00000394272 NFXL1Q6ZNB6 911 aa23.81■■□□□ 1.4
HDDC3-202ENST00000394272 ENAHQ8N8S7 591 aaPredicted RBP23.81■■□□□ 1.4
HDDC3-202ENST00000394272 SLC44A5Q8NCS7 719 aa23.81■■□□□ 1.4
HDDC3-202ENST00000394272 PRMT6Q96LA8 375 aaPredicted RBP23.81■■□□□ 1.4
HDDC3-202ENST00000394272 HDAC9Q9UKV0 1011 aa23.81■■□□□ 1.4
HDDC3-202ENST00000394272 NID2Q14112 1375 aa23.81■■□□□ 1.4
HDDC3-202ENST00000394272 CCDC69A6NI79 296 aa23.81■■□□□ 1.4
HDDC3-202ENST00000394272 FAM47AQ5JRC9 791 aa23.81■■□□□ 1.4
HDDC3-202ENST00000394272 TTC6Q86TZ1 520 aa23.81■■□□□ 1.4
HDDC3-202ENST00000394272 ZBTB43O43298 467 aa23.8■■□□□ 1.4
HDDC3-202ENST00000394272 CDK8P49336 464 aa23.8■■□□□ 1.4
HDDC3-202ENST00000394272 GABPAQ06546 454 aa23.8■■□□□ 1.4
HDDC3-202ENST00000394272 CLEC17AQ6ZS10 378 aa23.8■■□□□ 1.4
HDDC3-202ENST00000394272 RAB11FIP4Q86YS3 637 aa23.8■■□□□ 1.4
HDDC3-202ENST00000394272 OGFOD1Q8N543 542 aa23.8■■□□□ 1.4
HDDC3-202ENST00000394272 MKNK2Q9HBH9 465 aa23.8■■□□□ 1.4
HDDC3-202ENST00000394272 ZNF287Q9HBT7 754 aa23.8■■□□□ 1.4
HDDC3-202ENST00000394272 FAM198AQ9UFP1 575 aa23.8■■□□□ 1.4
HDDC3-202ENST00000394272 SLC12A7Q9Y666 1083 aa23.8■■□□□ 1.4
HDDC3-202ENST00000394272 DICER1Q9UPY3 1922 aaKnown RBP23.8■■□□□ 1.4
HDDC3-202ENST00000394272 SRCAPQ6ZRS2 3230 aa23.8■■□□□ 1.4
HDDC3-202ENST00000394272 MYH8P13535 1937 aa23.79■■□□□ 1.4
HDDC3-202ENST00000394272 SPDYE2BA6NHP3 402 aa23.79■■□□□ 1.4
HDDC3-202ENST00000394272 TSPY2A6NKD2 308 aa23.79■■□□□ 1.4
HDDC3-202ENST00000394272 STX6O43752 255 aa23.79■■□□□ 1.4
HDDC3-202ENST00000394272 SPDYE6P0CI01 402 aa23.79■■□□□ 1.4
HDDC3-202ENST00000394272 SIPA1L1O43166 1804 aa23.79■■□□□ 1.4
HDDC3-202ENST00000394272 FZD9O00144 591 aa23.79■■□□□ 1.4
HDDC3-202ENST00000394272 DHX16O60231 1041 aaKnown RBP23.79■■□□□ 1.4
HDDC3-202ENST00000394272 RASA1P20936 1047 aa23.79■■□□□ 1.4
HDDC3-202ENST00000394272 METAP2P50579 478 aaKnown RBP eCLIP23.79■■□□□ 1.4
HDDC3-202ENST00000394272 RCAN1P53805 252 aa23.79■■□□□ 1.4
HDDC3-202ENST00000394272 CACNB3P54284 484 aa23.79■■□□□ 1.4
HDDC3-202ENST00000394272 TNIP1Q15025 636 aa23.79■■□□□ 1.4
HDDC3-202ENST00000394272 MICU3Q86XE3 530 aa23.79■■□□□ 1.4
HDDC3-202ENST00000394272 SYT17Q9BSW7 474 aa23.79■■□□□ 1.4
HDDC3-202ENST00000394272 TDRD3Q9H7E2 651 aaKnown RBP23.79■■□□□ 1.4
HDDC3-202ENST00000394272 WDR33Q9C0J8 1336 aaKnown RBP23.79■■□□□ 1.4
HDDC3-202ENST00000394272 PTPDC1A2A3K4 754 aa23.78■■□□□ 1.4
HDDC3-202ENST00000394272 HMGN5P82970 282 aaKnown RBP23.78■■□□□ 1.4
HDDC3-202ENST00000394272 MTMR14Q8NCE2 650 aa23.78■■□□□ 1.4
HDDC3-202ENST00000394272 SBF1O95248 1867 aa23.78■■□□□ 1.4
HDDC3-202ENST00000394272 RXRAP19793 462 aa23.77■■□□□ 1.4
HDDC3-202ENST00000394272 TFAP4Q01664 338 aa23.77■■□□□ 1.4
HDDC3-202ENST00000394272 ZFPM1Q8IX07 1006 aa23.77■■□□□ 1.4
HDDC3-202ENST00000394272 ZNF444Q8N0Y2 327 aaPredicted RBP23.77■■□□□ 1.4
HDDC3-202ENST00000394272 MYL10Q9BUA6 226 aa23.77■■□□□ 1.4
HDDC3-202ENST00000394272 NMT2O60551 498 aa23.77■■□□□ 1.4
HDDC3-202ENST00000394272 PDIA4P13667 645 aaKnown RBP23.77■■□□□ 1.4
HDDC3-202ENST00000394272 PDCP20941 246 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms