RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 hCG_1642624A0A1W2PR95 340 aa22.55■■□□□ 1.2
RCCD1-201ENST00000394258 PPP6R2O75170 966 aa22.55■■□□□ 1.2
RCCD1-201ENST00000394258 UTP14CQ5TAP6 766 aaKnown RBP22.55■■□□□ 1.2
RCCD1-201ENST00000394258 NOSTRINQ8IVI9 506 aa22.55■■□□□ 1.2
RCCD1-201ENST00000394258 LINC00116Q8NCU8 138 aa22.55■■□□□ 1.2
RCCD1-201ENST00000394258 PLCH1Q4KWH8 1693 aa22.55■■□□□ 1.2
RCCD1-201ENST00000394258 RBM6P78332 1123 aaKnown RBP22.54■■□□□ 1.2
RCCD1-201ENST00000394258 NCAPHQ15003 741 aa22.54■■□□□ 1.2
RCCD1-201ENST00000394258 CELF1Q92879 486 aaKnown RBP22.54■■□□□ 1.2
RCCD1-201ENST00000394258 CHD4Q14839 1912 aa22.54■■□□□ 1.2
RCCD1-201ENST00000394258 GRIN1Q05586 938 aa22.54■■□□□ 1.2
RCCD1-201ENST00000394258 LONRF3Q496Y0 759 aa22.54■■□□□ 1.2
RCCD1-201ENST00000394258 CEP135Q66GS9 1140 aa22.54■■□□□ 1.2
RCCD1-201ENST00000394258 PTF1AQ7RTS3 328 aa22.54■■□□□ 1.2
RCCD1-201ENST00000394258 ZNF654Q8IZM8 581 aa22.54■■□□□ 1.2
RCCD1-201ENST00000394258 PDCL2Q8N4E4 241 aa22.54■■□□□ 1.2
RCCD1-201ENST00000394258 SPATA31A5Q5VU36 1347 aa22.54■■□□□ 1.2
RCCD1-201ENST00000394258 SPATA31A7Q8IWB4 1347 aa22.54■■□□□ 1.2
RCCD1-201ENST00000394258 ARAP2Q8WZ64 1704 aa22.54■■□□□ 1.2
RCCD1-201ENST00000394258 SMTNL1A8MU46 457 aa22.54■■□□□ 1.2
RCCD1-201ENST00000394258 MMP1P03956 469 aa22.54■■□□□ 1.2
RCCD1-201ENST00000394258 SAFBQ15424 915 aaKnown RBP eCLIP22.54■■□□□ 1.2
RCCD1-201ENST00000394258 FAM98CQ17RN3 349 aaKnown RBP22.54■■□□□ 1.2
RCCD1-201ENST00000394258 TMC6Q7Z403 805 aa22.54■■□□□ 1.2
RCCD1-201ENST00000394258 FANCBQ8NB91 859 aa22.54■■□□□ 1.2
RCCD1-201ENST00000394258 HPSEQ9Y251 543 aa22.54■■□□□ 1.2
RCCD1-201ENST00000394258 ATP1A3P13637 1013 aa22.53■■□□□ 1.2
RCCD1-201ENST00000394258 KLRK1P26718 216 aa22.53■■□□□ 1.2
RCCD1-201ENST00000394258 TOB1P50616 345 aaPredicted RBP22.53■■□□□ 1.2
RCCD1-201ENST00000394258 PTPN21Q16825 1174 aa22.53■■□□□ 1.2
RCCD1-201ENST00000394258 CRACR2BQ8N4Y2 399 aaPredicted RBP22.53■■□□□ 1.2
RCCD1-201ENST00000394258 ECM29Q5VYK3 1845 aa22.53■■□□□ 1.2
RCCD1-201ENST00000394258 FOXN1O15353 648 aa22.53■■□□□ 1.2
RCCD1-201ENST00000394258 NCBP1Q09161 790 aaKnown RBP22.53■■□□□ 1.2
RCCD1-201ENST00000394258 OXER1Q8TDS5 423 aa22.53■■□□□ 1.2
RCCD1-201ENST00000394258 RNF41Q9H4P4 317 aaPredicted RBP22.53■■□□□ 1.2
RCCD1-201ENST00000394258 GNL3LQ9NVN8 582 aaKnown RBP22.53■■□□□ 1.2
RCCD1-201ENST00000394258 KCNH3Q9ULD8 1083 aa22.53■■□□□ 1.2
RCCD1-201ENST00000394258 MINPP1Q9UNW1 487 aa22.53■■□□□ 1.2
RCCD1-201ENST00000394258 TNKSO95271 1327 aa22.52■■□□□ 1.2
RCCD1-201ENST00000394258 DOCK2Q92608 1830 aa22.52■■□□□ 1.2
RCCD1-201ENST00000394258 PIP4K2BP78356 416 aa22.52■■□□□ 1.2
RCCD1-201ENST00000394258 EVX2Q03828 476 aa22.52■■□□□ 1.2
RCCD1-201ENST00000394258 RESP18Q5W5W9 173 aa22.52■■□□□ 1.2
RCCD1-201ENST00000394258 WASF1Q92558 559 aa22.52■■□□□ 1.2
RCCD1-201ENST00000394258 CAVIN4Q5BKX8 364 aa22.52■■□□□ 1.2
RCCD1-201ENST00000394258 ANKRD7Q92527 254 aa22.52■■□□□ 1.2
RCCD1-201ENST00000394258 JAG2Q9Y219 1238 aa22.52■■□□□ 1.2
RCCD1-201ENST00000394258 STK36Q9NRP7 1315 aa22.52■■□□□ 1.19
RCCD1-201ENST00000394258 TBC1D9BQ66K14 1250 aa22.51■■□□□ 1.19
RCCD1-201ENST00000394258 CNNM3Q8NE01 707 aa22.51■■□□□ 1.19
RCCD1-201ENST00000394258 RTL9Q8NET4 1388 aa22.51■■□□□ 1.19
RCCD1-201ENST00000394258 ARMCX5Q6P1M9 558 aa22.51■■□□□ 1.19
RCCD1-201ENST00000394258 FOXP4Q8IVH2 680 aaPredicted RBP22.51■■□□□ 1.19
RCCD1-201ENST00000394258 CCDC112Q8NEF3 446 aa22.51■■□□□ 1.19
RCCD1-201ENST00000394258 FAM84BQ96KN1 310 aaPredicted RBP22.51■■□□□ 1.19
RCCD1-201ENST00000394258 PCDHB6Q9Y5E3 794 aa22.51■■□□□ 1.19
RCCD1-201ENST00000394258 PHLPP1O60346 1717 aa22.5■■□□□ 1.19
RCCD1-201ENST00000394258 NEMFO60524 1076 aa22.5■■□□□ 1.19
RCCD1-201ENST00000394258 CUTAO60888 179 aa22.5■■□□□ 1.19
RCCD1-201ENST00000394258 METTL16Q86W50 562 aaKnown RBP22.5■■□□□ 1.19
RCCD1-201ENST00000394258 KRI1Q8N9T8 703 aaKnown RBP22.5■■□□□ 1.19
RCCD1-201ENST00000394258 ESR2Q92731 530 aa22.5■■□□□ 1.19
RCCD1-201ENST00000394258 SMARCC1Q92922 1105 aaPredicted RBP22.5■■□□□ 1.19
RCCD1-201ENST00000394258 BPIFA3Q9BQP9 254 aa22.5■■□□□ 1.19
RCCD1-201ENST00000394258 HSD3B7Q9H2F3 369 aa22.5■■□□□ 1.19
RCCD1-201ENST00000394258 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.5■■□□□ 1.19
RCCD1-201ENST00000394258 TFCP2L1Q9NZI6 479 aa22.5■■□□□ 1.19
RCCD1-201ENST00000394258 COL1A1P02452 1464 aaPredicted RBP22.5■■□□□ 1.19
RCCD1-201ENST00000394258 PTPN14Q15678 1187 aa22.5■■□□□ 1.19
RCCD1-201ENST00000394258 CCAR2Q8N163 923 aaKnown RBP22.5■■□□□ 1.19
RCCD1-201ENST00000394258 ZNF384Q8TF68 577 aa22.5■■□□□ 1.19
RCCD1-201ENST00000394258 TIGD1Q96MW7 591 aa22.5■■□□□ 1.19
RCCD1-201ENST00000394258 RIOK1Q9BRS2 568 aaKnown RBP22.5■■□□□ 1.19
RCCD1-201ENST00000394258 BSDC1Q9NW68 430 aaPredicted RBP22.5■■□□□ 1.19
RCCD1-201ENST00000394258 ZNF804BA4D1E1 1349 aa22.5■■□□□ 1.19
RCCD1-201ENST00000394258 WNK3Q9BYP7 1800 aa22.49■■□□□ 1.19
RCCD1-201ENST00000394258 DEXIO95424 95 aa22.49■■□□□ 1.19
RCCD1-201ENST00000394258 HSP90AA4PQ58FG1 418 aa22.49■■□□□ 1.19
RCCD1-201ENST00000394258 NYAP1Q6ZVC0 841 aa22.49■■□□□ 1.19
RCCD1-201ENST00000394258 TMTC2Q8N394 836 aa22.49■■□□□ 1.19
RCCD1-201ENST00000394258 PDILTQ8N807 584 aa22.49■■□□□ 1.19
RCCD1-201ENST00000394258 CABP5Q9NP86 173 aa22.49■■□□□ 1.19
RCCD1-201ENST00000394258 SRP68Q9UHB9 627 aaKnown RBP22.49■■□□□ 1.19
RCCD1-201ENST00000394258 SLC4A8Q2Y0W8 1093 aa22.49■■□□□ 1.19
RCCD1-201ENST00000394258 DPF2Q92785 391 aa22.49■■□□□ 1.19
RCCD1-201ENST00000394258 PCDHA5Q9Y5H7 936 aa22.49■■□□□ 1.19
RCCD1-201ENST00000394258 BAZ2BQ9UIF8 2168 aaKnown RBP22.48■■□□□ 1.19
RCCD1-201ENST00000394258 BCL9LQ86UU0 1499 aa22.48■■□□□ 1.19
RCCD1-201ENST00000394258 CCDC196A0A1B0GTZ2 297 aa22.48■■□□□ 1.19
RCCD1-201ENST00000394258 TPM4P67936 248 aa22.48■■□□□ 1.19
RCCD1-201ENST00000394258 UBE4AQ14139 1066 aa22.48■■□□□ 1.19
RCCD1-201ENST00000394258 CLEC4GQ6UXB4 293 aa22.48■■□□□ 1.19
RCCD1-201ENST00000394258 KRBA2Q6ZNG9 492 aa22.48■■□□□ 1.19
RCCD1-201ENST00000394258 ENAHQ8N8S7 591 aaPredicted RBP22.48■■□□□ 1.19
RCCD1-201ENST00000394258 VPS54Q9P1Q0 977 aa22.48■■□□□ 1.19
RCCD1-201ENST00000394258 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.48■■□□□ 1.19
RCCD1-201ENST00000394258 TUBE1Q9UJT0 475 aa22.48■■□□□ 1.19
RCCD1-201ENST00000394258 V9GYY5 206 aaPredicted RBP22.48■■□□□ 1.19
RCCD1-201ENST00000394258 FAM205CA6NFA0 338 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms