RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 PNMA6EA0A0J9YXQ4 647 aa22.88■■□□□ 1.25
SNCB-202ENST00000393693 TNPO2O14787 897 aaKnown RBP22.88■■□□□ 1.25
SNCB-202ENST00000393693 RRP1BQ14684 758 aaKnown RBP22.88■■□□□ 1.25
SNCB-202ENST00000393693 GORABQ5T7V8 394 aa22.88■■□□□ 1.25
SNCB-202ENST00000393693 ANKRD13CQ8N6S4 541 aa22.88■■□□□ 1.25
SNCB-202ENST00000393693 RAI14Q9P0K7 980 aa22.88■■□□□ 1.25
SNCB-202ENST00000393693 AGTPBP1Q9UPW5 1226 aa22.88■■□□□ 1.25
SNCB-202ENST00000393693 DOCK1Q14185 1865 aa22.88■■□□□ 1.25
SNCB-202ENST00000393693 PHIPQ8WWQ0 1821 aa22.87■■□□□ 1.25
SNCB-202ENST00000393693 NPM3O75607 178 aaKnown RBP22.87■■□□□ 1.25
SNCB-202ENST00000393693 LDHCP07864 332 aa22.87■■□□□ 1.25
SNCB-202ENST00000393693 TRIM27P14373 513 aa22.87■■□□□ 1.25
SNCB-202ENST00000393693 MGAMO43451 1857 aa22.87■■□□□ 1.25
SNCB-202ENST00000393693 INHAP05111 366 aa22.86■■□□□ 1.25
SNCB-202ENST00000393693 ARID4AP29374 1257 aaPredicted RBP22.86■■□□□ 1.25
SNCB-202ENST00000393693 MCAMP43121 646 aa22.86■■□□□ 1.25
SNCB-202ENST00000393693 GSTO1P78417 241 aa22.86■■□□□ 1.25
SNCB-202ENST00000393693 SPP2Q13103 211 aa22.86■■□□□ 1.25
SNCB-202ENST00000393693 CRBNQ96SW2 442 aa22.86■■□□□ 1.25
SNCB-202ENST00000393693 OSBPL5Q9H0X9 879 aaPredicted RBP22.86■■□□□ 1.25
SNCB-202ENST00000393693 TAOK2Q9UL54 1235 aa22.86■■□□□ 1.25
SNCB-202ENST00000393693 CEP290O15078 2479 aa22.86■■□□□ 1.25
SNCB-202ENST00000393693 PTPRFP10586 1907 aa22.85■■□□□ 1.25
SNCB-202ENST00000393693 FARP2O94887 1054 aaPredicted RBP22.85■■□□□ 1.25
SNCB-202ENST00000393693 SGPL1O95470 568 aa22.85■■□□□ 1.25
SNCB-202ENST00000393693 GNAI2P04899 355 aa22.85■■□□□ 1.25
SNCB-202ENST00000393693 G3BP1Q13283 466 aaKnown RBP eCLIP22.85■■□□□ 1.25
SNCB-202ENST00000393693 EXOC6Q8TAG9 804 aa22.85■■□□□ 1.25
SNCB-202ENST00000393693 CLUAP1Q96AJ1 413 aa22.85■■□□□ 1.25
SNCB-202ENST00000393693 RBM27Q9P2N5 1060 aaKnown RBP22.85■■□□□ 1.25
SNCB-202ENST00000393693 IRF5Q13568 498 aa22.84■■□□□ 1.25
SNCB-202ENST00000393693 TEX11Q8IYF3 940 aa22.84■■□□□ 1.25
SNCB-202ENST00000393693 PXYLP1Q8TE99 480 aa22.84■■□□□ 1.25
SNCB-202ENST00000393693 SH3RF3Q8TEJ3 882 aaPredicted RBP22.84■■□□□ 1.25
SNCB-202ENST00000393693 HTATIP2Q9BUP3 242 aa22.84■■□□□ 1.25
SNCB-202ENST00000393693 SNRKQ9NRH2 765 aa22.84■■□□□ 1.25
SNCB-202ENST00000393693 CAP2P40123 477 aa22.83■■□□□ 1.25
SNCB-202ENST00000393693 HMGCS2P54868 508 aa22.83■■□□□ 1.25
SNCB-202ENST00000393693 C20orf194Q5TEA3 1177 aa22.83■■□□□ 1.25
SNCB-202ENST00000393693 ATF7IPQ6VMQ6 1270 aa22.83■■□□□ 1.25
SNCB-202ENST00000393693 FTSJ3Q8IY81 847 aaKnown RBP22.83■■□□□ 1.25
SNCB-202ENST00000393693 ZNF280CQ8ND82 737 aa22.83■■□□□ 1.25
SNCB-202ENST00000393693 DEFB118Q96PH6 123 aa22.83■■□□□ 1.25
SNCB-202ENST00000393693 LRP2BPQ9P2M1 347 aa22.83■■□□□ 1.25
SNCB-202ENST00000393693 MAP4K4O95819 1239 aaPredicted RBP22.82■■□□□ 1.24
SNCB-202ENST00000393693 PROCA1Q8NCQ7 364 aaPredicted RBP22.82■■□□□ 1.24
SNCB-202ENST00000393693 COA7Q96BR5 231 aa22.82■■□□□ 1.24
SNCB-202ENST00000393693 PNMA3Q9UL41 463 aa22.82■■□□□ 1.24
SNCB-202ENST00000393693 TRIOBPQ9H2D6 2365 aa22.81■■□□□ 1.24
SNCB-202ENST00000393693 TFRCP02786 760 aaKnown RBP22.81■■□□□ 1.24
SNCB-202ENST00000393693 AAMPQ13685 434 aa22.81■■□□□ 1.24
SNCB-202ENST00000393693 FAM110CQ1W6H9 321 aa22.81■■□□□ 1.24
SNCB-202ENST00000393693 AATFQ9NY61 560 aaKnown RBP eCLIP22.81■■□□□ 1.24
SNCB-202ENST00000393693 COL2A1P02458 1487 aaPredicted RBP22.8■■□□□ 1.24
SNCB-202ENST00000393693 USP17L5A8MUK1 530 aa22.8■■□□□ 1.24
SNCB-202ENST00000393693 UQCRFS1P1P0C7P4 283 aa22.8■■□□□ 1.24
SNCB-202ENST00000393693 JAG1P78504 1218 aa22.79■■□□□ 1.24
SNCB-202ENST00000393693 TMEM57Q8N5G2 664 aa22.79■■□□□ 1.24
SNCB-202ENST00000393693 CCDC136Q96JN2 1154 aa22.79■■□□□ 1.24
SNCB-202ENST00000393693 DBNDD2Q9BQY9 259 aa22.79■■□□□ 1.24
SNCB-202ENST00000393693 ASCC2Q9H1I8 757 aaPredicted RBP22.79■■□□□ 1.24
SNCB-202ENST00000393693 PAK6Q9NQU5 681 aaPredicted RBP22.79■■□□□ 1.24
SNCB-202ENST00000393693 ZBTB7BO15156 539 aaPredicted RBP22.78■■□□□ 1.24
SNCB-202ENST00000393693 SHROOM1Q2M3G4 852 aaPredicted RBP22.78■■□□□ 1.24
SNCB-202ENST00000393693 SH3D19Q5HYK7 790 aa22.78■■□□□ 1.24
SNCB-202ENST00000393693 TTC39AQ5SRH9 613 aa22.78■■□□□ 1.24
SNCB-202ENST00000393693 NAA16Q6N069 864 aaPredicted RBP22.78■■□□□ 1.24
SNCB-202ENST00000393693 ADGRA1Q86SQ6 560 aa22.78■■□□□ 1.24
SNCB-202ENST00000393693 MAPKAPK5Q8IW41 473 aa22.78■■□□□ 1.24
SNCB-202ENST00000393693 PRO3102Q9H379 93 aa22.78■■□□□ 1.24
SNCB-202ENST00000393693 PI4KBQ9UBF8 816 aa22.78■■□□□ 1.24
SNCB-202ENST00000393693 HERC5Q9UII4 1024 aaKnown RBP22.78■■□□□ 1.24
SNCB-202ENST00000393693 NR2E3Q9Y5X4 410 aa22.78■■□□□ 1.24
SNCB-202ENST00000393693 PEX10O60683 326 aa22.77■■□□□ 1.24
SNCB-202ENST00000393693 GCLCP48506 637 aaPredicted RBP22.77■■□□□ 1.24
SNCB-202ENST00000393693 TNNI3KQ59H18 835 aa22.77■■□□□ 1.24
SNCB-202ENST00000393693 PANK1Q8TE04 598 aa22.77■■□□□ 1.24
SNCB-202ENST00000393693 TGFBRAP1Q8WUH2 860 aa22.77■■□□□ 1.24
SNCB-202ENST00000393693 NOL10Q9BSC4 688 aaKnown RBP22.77■■□□□ 1.24
SNCB-202ENST00000393693 TBC1D2Q9BYX2 928 aa22.77■■□□□ 1.24
SNCB-202ENST00000393693 FPGT-TNNI3KV9GXZ4 949 aa22.77■■□□□ 1.24
SNCB-202ENST00000393693 SZT2Q5T011 3432 aa22.76■■□□□ 1.23
SNCB-202ENST00000393693 CYP2E1P05181 493 aaPredicted RBP22.76■■□□□ 1.23
SNCB-202ENST00000393693 TRIM32Q13049 653 aa22.76■■□□□ 1.23
SNCB-202ENST00000393693 PABPC4Q13310 644 aaKnown RBP eCLIP22.76■■□□□ 1.23
SNCB-202ENST00000393693 POLA2Q14181 598 aa22.76■■□□□ 1.23
SNCB-202ENST00000393693 PAWRQ96IZ0 340 aaKnown RBP22.76■■□□□ 1.23
SNCB-202ENST00000393693 CRISPLD2Q9H0B8 497 aa22.76■■□□□ 1.23
SNCB-202ENST00000393693 DNAJC18Q9H819 358 aa22.76■■□□□ 1.23
SNCB-202ENST00000393693 AS3MTQ9HBK9 375 aa22.76■■□□□ 1.23
SNCB-202ENST00000393693 GJD2Q9UKL4 321 aa22.76■■□□□ 1.23
SNCB-202ENST00000393693 LOC285556D6RIA3 1793 aa22.76■■□□□ 1.23
SNCB-202ENST00000393693 DOCK3Q8IZD9 2030 aa22.75■■□□□ 1.23
SNCB-202ENST00000393693 BAG3O95817 575 aa22.75■■□□□ 1.23
SNCB-202ENST00000393693 MTMR2Q13614 643 aa22.75■■□□□ 1.23
SNCB-202ENST00000393693 CCDC158Q5M9N0 1113 aa22.75■■□□□ 1.23
SNCB-202ENST00000393693 DIS3LQ8TF46 1054 aaKnown RBP22.75■■□□□ 1.23
SNCB-202ENST00000393693 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.75■■□□□ 1.23
SNCB-202ENST00000393693 DHX36Q9H2U1 1008 aaKnown RBP22.75■■□□□ 1.23
SNCB-202ENST00000393693 CHMP4BQ9H444 224 aaKnown RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms