RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 MRIQ9BWK5 157 aa20.51■□□□□ 0.87
MBD4-202ENST00000393278 VPS33BQ9H267 617 aa20.51■□□□□ 0.87
MBD4-202ENST00000393278 CCDC69A6NI79 296 aa20.51■□□□□ 0.87
MBD4-202ENST00000393278 YDJCA8MPS7 323 aa20.51■□□□□ 0.87
MBD4-202ENST00000393278 RANBP6O60518 1105 aaKnown RBP20.51■□□□□ 0.87
MBD4-202ENST00000393278 F13A1P00488 732 aa20.51■□□□□ 0.87
MBD4-202ENST00000393278 SEC23AQ15436 765 aa20.51■□□□□ 0.87
MBD4-202ENST00000393278 FOCADQ5VW36 1801 aa20.51■□□□□ 0.87
MBD4-202ENST00000393278 BRCA1P38398 1863 aaKnown RBP20.5■□□□□ 0.87
MBD4-202ENST00000393278 TNKSO95271 1327 aa20.5■□□□□ 0.87
MBD4-202ENST00000393278 VPS37CA5D8V6 355 aaPredicted RBP20.5■□□□□ 0.87
MBD4-202ENST00000393278 PSDA5PKW4 1024 aaPredicted RBP20.5■□□□□ 0.87
MBD4-202ENST00000393278 ZBTB43O43298 467 aa20.5■□□□□ 0.87
MBD4-202ENST00000393278 CRKP46108 304 aa20.5■□□□□ 0.87
MBD4-202ENST00000393278 METAP2P50579 478 aaKnown RBP eCLIP20.5■□□□□ 0.87
MBD4-202ENST00000393278 HDLBPQ00341 1268 aaKnown RBP20.5■□□□□ 0.87
MBD4-202ENST00000393278 DALRD3Q5D0E6 543 aaKnown RBP20.5■□□□□ 0.87
MBD4-202ENST00000393278 MCTP1Q6DN14 999 aa20.5■□□□□ 0.87
MBD4-202ENST00000393278 RAB11FIP4Q86YS3 637 aa20.5■□□□□ 0.87
MBD4-202ENST00000393278 FAM184AQ8NB25 1140 aa20.5■□□□□ 0.87
MBD4-202ENST00000393278 KIF3AQ9Y496 699 aa20.5■□□□□ 0.87
MBD4-202ENST00000393278 CD2APQ9Y5K6 639 aa20.5■□□□□ 0.87
MBD4-202ENST00000393278 SLC12A7Q9Y666 1083 aa20.5■□□□□ 0.87
MBD4-202ENST00000393278 NID2Q14112 1375 aa20.5■□□□□ 0.87
MBD4-202ENST00000393278 POLR3DP05423 398 aaPredicted RBP20.49■□□□□ 0.87
MBD4-202ENST00000393278 SLC4A8Q2Y0W8 1093 aa20.49■□□□□ 0.87
MBD4-202ENST00000393278 IQCA1Q86XH1 822 aa20.49■□□□□ 0.87
MBD4-202ENST00000393278 KIAA0825Q8IV33 1275 aa20.49■□□□□ 0.87
MBD4-202ENST00000393278 ZDHHC15Q96MV8 337 aa20.49■□□□□ 0.87
MBD4-202ENST00000393278 ZSCAN10Q96SZ4 725 aaPredicted RBP20.49■□□□□ 0.87
MBD4-202ENST00000393278 ZNF277Q9NRM2 450 aaPredicted RBP20.49■□□□□ 0.87
MBD4-202ENST00000393278 SAP30BPQ9UHR5 308 aaKnown RBP20.49■□□□□ 0.87
MBD4-202ENST00000393278 ADAMTSL1Q8N6G6 1762 aa20.49■□□□□ 0.87
MBD4-202ENST00000393278 PSME4Q14997 1843 aa20.48■□□□□ 0.87
MBD4-202ENST00000393278 PTGER2P43116 358 aa20.48■□□□□ 0.87
MBD4-202ENST00000393278 APOBEC3HQ6NTF7 200 aaKnown RBP20.48■□□□□ 0.87
MBD4-202ENST00000393278 MICU3Q86XE3 530 aa20.48■□□□□ 0.87
MBD4-202ENST00000393278 CPLX1O14810 134 aa20.48■□□□□ 0.87
MBD4-202ENST00000393278 PLCD1P51178 756 aa20.48■□□□□ 0.87
MBD4-202ENST00000393278 RCAN1P53805 252 aa20.48■□□□□ 0.87
MBD4-202ENST00000393278 SYNE3Q6ZMZ3 975 aa20.48■□□□□ 0.87
MBD4-202ENST00000393278 CDC37L1Q7L3B6 337 aa20.48■□□□□ 0.87
MBD4-202ENST00000393278 LARGE2Q8N3Y3 721 aa20.48■□□□□ 0.87
MBD4-202ENST00000393278 ENAHQ8N8S7 591 aaPredicted RBP20.48■□□□□ 0.87
MBD4-202ENST00000393278 DYNLL2Q96FJ2 89 aa20.48■□□□□ 0.87
MBD4-202ENST00000393278 CHAMP1Q96JM3 812 aa20.48■□□□□ 0.87
MBD4-202ENST00000393278 USP40Q9NVE5 1235 aa20.48■□□□□ 0.87
MBD4-202ENST00000393278 PPP1R1BQ9UD71 204 aaPredicted RBP20.48■□□□□ 0.87
MBD4-202ENST00000393278 COL4A5P29400 1685 aa20.47■□□□□ 0.87
MBD4-202ENST00000393278 GOLGA8AA7E2F4 631 aa20.47■□□□□ 0.87
MBD4-202ENST00000393278 WDHD1O75717 1129 aaPredicted RBP20.47■□□□□ 0.87
MBD4-202ENST00000393278 RXRAP19793 462 aa20.47■□□□□ 0.87
MBD4-202ENST00000393278 CDC42EP5Q6NZY7 148 aa20.47■□□□□ 0.87
MBD4-202ENST00000393278 ATP6V1DQ9Y5K8 247 aa20.47■□□□□ 0.87
MBD4-202ENST00000393278 FDPSP14324 419 aaKnown RBP20.46■□□□□ 0.87
MBD4-202ENST00000393278 MYL10Q9BUA6 226 aa20.46■□□□□ 0.87
MBD4-202ENST00000393278 SERPINA10Q9UK55 444 aa20.46■□□□□ 0.87
MBD4-202ENST00000393278 MYH1P12882 1939 aa20.46■□□□□ 0.87
MBD4-202ENST00000393278 TSPY2A6NKD2 308 aa20.45■□□□□ 0.86
MBD4-202ENST00000393278 TRAK2O60296 914 aa20.45■□□□□ 0.86
MBD4-202ENST00000393278 CDKL5O76039 1030 aa20.45■□□□□ 0.86
MBD4-202ENST00000393278 CDC27P30260 824 aa20.45■□□□□ 0.86
MBD4-202ENST00000393278 ADD1P35611 737 aaKnown RBP20.45■□□□□ 0.86
MBD4-202ENST00000393278 FAM47AQ5JRC9 791 aa20.45■□□□□ 0.86
MBD4-202ENST00000393278 C16orf86Q6ZW13 317 aa20.45■□□□□ 0.86
MBD4-202ENST00000393278 ZNF654Q8IZM8 581 aa20.45■□□□□ 0.86
MBD4-202ENST00000393278 DDX4Q9NQI0 724 aaKnown RBP20.45■□□□□ 0.86
MBD4-202ENST00000393278 FAM217BQ9NTX9 383 aaPredicted RBP20.45■□□□□ 0.86
MBD4-202ENST00000393278 IFIT1BQ5T764 474 aaKnown RBP20.45■□□□□ 0.86
MBD4-202ENST00000393278 CPLX2Q6PUV4 134 aaKnown RBP20.45■□□□□ 0.86
MBD4-202ENST00000393278 MKNK2Q9HBH9 465 aa20.45■□□□□ 0.86
MBD4-202ENST00000393278 ZNF287Q9HBT7 754 aa20.45■□□□□ 0.86
MBD4-202ENST00000393278 MYO3BQ8WXR4 1341 aa20.44■□□□□ 0.86
MBD4-202ENST00000393278 IARSP41252 1262 aaKnown RBP20.44■□□□□ 0.86
MBD4-202ENST00000393278 PICALMQ13492 652 aa20.44■□□□□ 0.86
MBD4-202ENST00000393278 CCDC144CPQ8IYA2 1237 aa20.44■□□□□ 0.86
MBD4-202ENST00000393278 KLHL34Q8N239 644 aa20.44■□□□□ 0.86
MBD4-202ENST00000393278 LMBRD1Q9NUN5 540 aa20.44■□□□□ 0.86
MBD4-202ENST00000393278 ORC3Q9UBD5 711 aaPredicted RBP20.44■□□□□ 0.86
MBD4-202ENST00000393278 FER1L6Q2WGJ9 1857 aa20.44■□□□□ 0.86
MBD4-202ENST00000393278 ECM29Q5VYK3 1845 aa20.43■□□□□ 0.86
MBD4-202ENST00000393278 H3BQV1 296 aa20.43■□□□□ 0.86
MBD4-202ENST00000393278 PPFIA3O75145 1194 aa20.43■□□□□ 0.86
MBD4-202ENST00000393278 VIL1P09327 827 aaKnown RBP20.43■□□□□ 0.86
MBD4-202ENST00000393278 TFAP4Q01664 338 aa20.43■□□□□ 0.86
MBD4-202ENST00000393278 NTRK3Q16288 839 aa20.43■□□□□ 0.86
MBD4-202ENST00000393278 RTN1Q16799 776 aa20.43■□□□□ 0.86
MBD4-202ENST00000393278 FOXD4L6Q3SYB3 417 aaPredicted RBP20.43■□□□□ 0.86
MBD4-202ENST00000393278 IFFO2Q5TF58 517 aa20.43■□□□□ 0.86
MBD4-202ENST00000393278 RSBN1LQ6PCB5 846 aaPredicted RBP20.43■□□□□ 0.86
MBD4-202ENST00000393278 FOXD4L3Q6VB84 417 aaPredicted RBP20.43■□□□□ 0.86
MBD4-202ENST00000393278 NIM1KQ8IY84 436 aa20.43■□□□□ 0.86
MBD4-202ENST00000393278 SLC44A5Q8NCS7 719 aa20.43■□□□□ 0.86
MBD4-202ENST00000393278 TAOK3Q9H2K8 898 aa20.43■□□□□ 0.86
MBD4-202ENST00000393278 RASA1P20936 1047 aa20.42■□□□□ 0.86
MBD4-202ENST00000393278 CDK8P49336 464 aa20.42■□□□□ 0.86
MBD4-202ENST00000393278 SKOR2Q2VWA4 1001 aaPredicted RBP20.42■□□□□ 0.86
MBD4-202ENST00000393278 TTC6Q86TZ1 520 aa20.42■□□□□ 0.86
MBD4-202ENST00000393278 OSBPL5Q9H0X9 879 aaPredicted RBP20.42■□□□□ 0.86
MBD4-202ENST00000393278 ZNRF3Q9ULT6 936 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms