RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 MAP3K9P80192 1104 aa8.11□□□□□ -1.11
UBBP1-201ENST00000392399 BMP2KLQ5H9B9 411 aa8.11□□□□□ -1.11
UBBP1-201ENST00000392399 RGMBQ6NW40 437 aa8.11□□□□□ -1.11
UBBP1-201ENST00000392399 SH3BP5LQ7L8J4 393 aa8.11□□□□□ -1.11
UBBP1-201ENST00000392399 MAPKAPK5Q8IW41 473 aa8.11□□□□□ -1.11
UBBP1-201ENST00000392399 PLCD3Q8N3E9 789 aa8.11□□□□□ -1.11
UBBP1-201ENST00000392399 LCORLQ8N3X6 602 aa8.11□□□□□ -1.11
UBBP1-201ENST00000392399 NACAP1Q9BZK3 213 aa8.11□□□□□ -1.11
UBBP1-201ENST00000392399 DCP1AQ9NPI6 582 aaPredicted RBP8.11□□□□□ -1.11
UBBP1-201ENST00000392399 DIAPH3Q9NSV4 1193 aa8.11□□□□□ -1.11
UBBP1-201ENST00000392399 ZNF112Q9UJU3 913 aa8.11□□□□□ -1.11
UBBP1-201ENST00000392399 SLC4A4Q9Y6R1 1079 aa8.11□□□□□ -1.11
UBBP1-201ENST00000392399 UBE2Q2LH0YL09 131 aa8.1□□□□□ -1.11
UBBP1-201ENST00000392399 CHGBP05060 677 aa8.1□□□□□ -1.11
UBBP1-201ENST00000392399 POLR3DP05423 398 aaPredicted RBP8.1□□□□□ -1.11
UBBP1-201ENST00000392399 ZNF157P51786 506 aaPredicted RBP8.1□□□□□ -1.11
UBBP1-201ENST00000392399 PRKG1Q13976 671 aa8.1□□□□□ -1.11
UBBP1-201ENST00000392399 SLFNL1Q499Z3 407 aa8.1□□□□□ -1.11
UBBP1-201ENST00000392399 SBK1Q52WX2 424 aa8.1□□□□□ -1.11
UBBP1-201ENST00000392399 MIGA2Q7L4E1 593 aa8.1□□□□□ -1.11
UBBP1-201ENST00000392399 CDAN1Q8IWY9 1227 aa8.1□□□□□ -1.11
UBBP1-201ENST00000392399 DNAJC5GQ8N7S2 189 aa8.1□□□□□ -1.11
UBBP1-201ENST00000392399 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.1□□□□□ -1.11
UBBP1-201ENST00000392399 SDR42E1Q8WUS8 393 aa8.1□□□□□ -1.11
UBBP1-201ENST00000392399 RUFY2Q8WXA3 655 aa8.1□□□□□ -1.11
UBBP1-201ENST00000392399 SLC10A4Q96EP9 437 aa8.1□□□□□ -1.11
UBBP1-201ENST00000392399 TRIM34Q9BYJ4 488 aa8.1□□□□□ -1.11
UBBP1-201ENST00000392399 EHD4Q9H223 541 aa8.1□□□□□ -1.11
UBBP1-201ENST00000392399 TSPYL2Q9H2G4 693 aaPredicted RBP8.1□□□□□ -1.11
UBBP1-201ENST00000392399 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.1□□□□□ -1.11
UBBP1-201ENST00000392399 GINM1Q9NU53 330 aa8.1□□□□□ -1.11
UBBP1-201ENST00000392399 MCM9Q9NXL9 1143 aa8.1□□□□□ -1.11
UBBP1-201ENST00000392399 SERPINB13Q9UIV8 391 aa8.1□□□□□ -1.11
UBBP1-201ENST00000392399 PALD1Q9ULE6 856 aa8.1□□□□□ -1.11
UBBP1-201ENST00000392399 CSADQ9Y600 493 aa8.1□□□□□ -1.11
UBBP1-201ENST00000392399 PAPPA2Q9BXP8 1791 aa8.1□□□□□ -1.11
UBBP1-201ENST00000392399 GSG1L2A8MUP6 293 aa8.09□□□□□ -1.11
UBBP1-201ENST00000392399 PHF20L1A8MW92 1017 aa8.09□□□□□ -1.11
UBBP1-201ENST00000392399 M0R2C6 588 aa8.09□□□□□ -1.11
UBBP1-201ENST00000392399 PRKAB2O43741 272 aa8.09□□□□□ -1.11
UBBP1-201ENST00000392399 CTNND1O60716 968 aaKnown RBP8.09□□□□□ -1.11
UBBP1-201ENST00000392399 APPP05067 770 aa8.09□□□□□ -1.11
UBBP1-201ENST00000392399 MAP2K2P36507 400 aa8.09□□□□□ -1.11
UBBP1-201ENST00000392399 NOGQ13253 232 aa8.09□□□□□ -1.11
UBBP1-201ENST00000392399 NMIQ13287 307 aaPredicted RBP8.09□□□□□ -1.11
UBBP1-201ENST00000392399 ALX1Q15699 326 aa8.09□□□□□ -1.11
UBBP1-201ENST00000392399 CWC27Q6UX04 472 aaKnown RBP8.09□□□□□ -1.11
UBBP1-201ENST00000392399 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.09□□□□□ -1.11
UBBP1-201ENST00000392399 MOB2Q70IA6 237 aa8.09□□□□□ -1.11
UBBP1-201ENST00000392399 IFNL3Q8IZI9 196 aa8.09□□□□□ -1.11
UBBP1-201ENST00000392399 CRACR2BQ8N4Y2 399 aaPredicted RBP8.09□□□□□ -1.11
UBBP1-201ENST00000392399 FAM227BQ96M60 508 aa8.09□□□□□ -1.11
UBBP1-201ENST00000392399 WRNIP1Q96S55 665 aa8.09□□□□□ -1.11
UBBP1-201ENST00000392399 SEC62Q99442 399 aaKnown RBP8.09□□□□□ -1.11
UBBP1-201ENST00000392399 ARPP21Q9UBL0 812 aaPredicted RBP8.09□□□□□ -1.11
UBBP1-201ENST00000392399 SSC5DA1L4H1 1573 aa8.09□□□□□ -1.11
UBBP1-201ENST00000392399 PCNTO95613 3336 aa8.09□□□□□ -1.11
UBBP1-201ENST00000392399 MYH7P12883 1935 aa8.09□□□□□ -1.11
UBBP1-201ENST00000392399 RAD50Q92878 1312 aa8.08□□□□□ -1.12
UBBP1-201ENST00000392399 WDR33Q9C0J8 1336 aaKnown RBP8.08□□□□□ -1.12
UBBP1-201ENST00000392399 A0A0D9SFI3 127 aa8.08□□□□□ -1.12
UBBP1-201ENST00000392399 USP17L12C9JPN9 530 aa8.08□□□□□ -1.12
UBBP1-201ENST00000392399 USP17L21D6R901 530 aa8.08□□□□□ -1.12
UBBP1-201ENST00000392399 ZBTB48P10074 688 aaPredicted RBP8.08□□□□□ -1.12
UBBP1-201ENST00000392399 CHMLP26374 656 aa8.08□□□□□ -1.12
UBBP1-201ENST00000392399 PLCD1P51178 756 aa8.08□□□□□ -1.12
UBBP1-201ENST00000392399 INHBEP58166 350 aa8.08□□□□□ -1.12
UBBP1-201ENST00000392399 HTRA3P83110 453 aa8.08□□□□□ -1.12
UBBP1-201ENST00000392399 NOL9Q5SY16 702 aaKnown RBP8.08□□□□□ -1.12
UBBP1-201ENST00000392399 C12orf60Q5U649 245 aa8.08□□□□□ -1.12
UBBP1-201ENST00000392399 CYP4F22Q6NT55 531 aa8.08□□□□□ -1.12
UBBP1-201ENST00000392399 CTR9Q6PD62 1173 aa8.08□□□□□ -1.12
UBBP1-201ENST00000392399 PAXIP1Q6ZW49 1069 aaPredicted RBP8.08□□□□□ -1.12
UBBP1-201ENST00000392399 ERO1BQ86YB8 467 aa8.08□□□□□ -1.12
UBBP1-201ENST00000392399 CAPNS2Q96L46 248 aa8.08□□□□□ -1.12
UBBP1-201ENST00000392399 TBC1D2Q9BYX2 928 aa8.08□□□□□ -1.12
UBBP1-201ENST00000392399 NAPBQ9H115 298 aa8.08□□□□□ -1.12
UBBP1-201ENST00000392399 ZNF287Q9HBT7 754 aa8.08□□□□□ -1.12
UBBP1-201ENST00000392399 SWAP70Q9UH65 585 aa8.08□□□□□ -1.12
UBBP1-201ENST00000392399 SAP30BPQ9UHR5 308 aaKnown RBP8.08□□□□□ -1.12
UBBP1-201ENST00000392399 AK9Q5TCS8 1911 aa8.07□□□□□ -1.12
UBBP1-201ENST00000392399 CCDC171Q6TFL3 1326 aa8.07□□□□□ -1.12
UBBP1-201ENST00000392399 SPDYE5A6NIY4 337 aa8.07□□□□□ -1.12
UBBP1-201ENST00000392399 SLC3A2P08195 630 aaKnown RBP8.07□□□□□ -1.12
UBBP1-201ENST00000392399 ASNSP08243 561 aa8.07□□□□□ -1.12
UBBP1-201ENST00000392399 SLC10A3P09131 477 aa8.07□□□□□ -1.12
UBBP1-201ENST00000392399 HSPD1P10809 573 aaKnown RBP8.07□□□□□ -1.12
UBBP1-201ENST00000392399 INPP5BP32019 993 aa8.07□□□□□ -1.12
UBBP1-201ENST00000392399 CAP2P40123 477 aa8.07□□□□□ -1.12
UBBP1-201ENST00000392399 TDO2P48775 406 aa8.07□□□□□ -1.12
UBBP1-201ENST00000392399 VEGFBP49765 207 aa8.07□□□□□ -1.12
UBBP1-201ENST00000392399 PPATQ06203 517 aa8.07□□□□□ -1.12
UBBP1-201ENST00000392399 GABPAQ06546 454 aa8.07□□□□□ -1.12
UBBP1-201ENST00000392399 VGLL4Q14135 290 aa8.07□□□□□ -1.12
UBBP1-201ENST00000392399 TATDN1Q6P1N9 297 aa8.07□□□□□ -1.12
UBBP1-201ENST00000392399 CASC1Q6TDU7 716 aa8.07□□□□□ -1.12
UBBP1-201ENST00000392399 SCYL3Q8IZE3 742 aa8.07□□□□□ -1.12
UBBP1-201ENST00000392399 ZKSCAN4Q969J2 545 aaPredicted RBP8.07□□□□□ -1.12
UBBP1-201ENST00000392399 CCDC17Q96LX7 622 aa8.07□□□□□ -1.12
UBBP1-201ENST00000392399 DSCC1Q9BVC3 393 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms