RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 NAV1Q8NEY1 1877 aa13.83□□□□□ -0.2
IGHV4-28-201ENST00000390612 CXCL11O14625 94 aa13.83□□□□□ -0.2
IGHV4-28-201ENST00000390612 PTPRAP18433 802 aa13.83□□□□□ -0.2
IGHV4-28-201ENST00000390612 CRHR2Q13324 411 aa13.83□□□□□ -0.2
IGHV4-28-201ENST00000390612 HDAC1Q13547 482 aaPredicted RBP13.83□□□□□ -0.2
IGHV4-28-201ENST00000390612 FOXP4Q8IVH2 680 aaPredicted RBP13.83□□□□□ -0.2
IGHV4-28-201ENST00000390612 MAPKAPK5Q8IW41 473 aa13.83□□□□□ -0.2
IGHV4-28-201ENST00000390612 FAM43AQ8N2R8 423 aa13.83□□□□□ -0.2
IGHV4-28-201ENST00000390612 ABHD8Q96I13 439 aa13.83□□□□□ -0.2
IGHV4-28-201ENST00000390612 DNAJC2Q99543 621 aaKnown RBP13.83□□□□□ -0.2
IGHV4-28-201ENST00000390612 MCOLN1Q9GZU1 580 aa13.83□□□□□ -0.2
IGHV4-28-201ENST00000390612 DNAJC18Q9H819 358 aa13.83□□□□□ -0.2
IGHV4-28-201ENST00000390612 ECHDC1Q9NTX5 307 aa13.83□□□□□ -0.2
IGHV4-28-201ENST00000390612 AFG3L2Q9Y4W6 797 aa13.83□□□□□ -0.2
IGHV4-28-201ENST00000390612 DOCK3Q8IZD9 2030 aa13.82□□□□□ -0.2
IGHV4-28-201ENST00000390612 FAM196BA6NMK8 535 aa13.82□□□□□ -0.2
IGHV4-28-201ENST00000390612 BTBD19C9JJ37 291 aa13.82□□□□□ -0.2
IGHV4-28-201ENST00000390612 FKTNO75072 461 aa13.82□□□□□ -0.2
IGHV4-28-201ENST00000390612 ADD2P35612 726 aa13.82□□□□□ -0.2
IGHV4-28-201ENST00000390612 CTU1Q7Z7A3 348 aaKnown RBP13.82□□□□□ -0.2
IGHV4-28-201ENST00000390612 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.82□□□□□ -0.2
IGHV4-28-201ENST00000390612 PALD1Q9ULE6 856 aa13.82□□□□□ -0.2
IGHV4-28-201ENST00000390612 SALL3Q9BXA9 1300 aa13.82□□□□□ -0.2
IGHV4-28-201ENST00000390612 ZNF532Q9HCE3 1301 aa13.82□□□□□ -0.2
IGHV4-28-201ENST00000390612 CAP2P40123 477 aa13.81□□□□□ -0.2
IGHV4-28-201ENST00000390612 DGKZQ13574 1117 aa13.81□□□□□ -0.2
IGHV4-28-201ENST00000390612 ZHX2Q9Y6X8 837 aa13.81□□□□□ -0.2
IGHV4-28-201ENST00000390612 MYH8P13535 1937 aa13.8□□□□□ -0.2
IGHV4-28-201ENST00000390612 A0A0G2JLL6 359 aaPredicted RBP13.8□□□□□ -0.2
IGHV4-28-201ENST00000390612 MAGEB6P1A0A0J9YX57 407 aa13.8□□□□□ -0.2
IGHV4-28-201ENST00000390612 JAG1P78504 1218 aa13.8□□□□□ -0.2
IGHV4-28-201ENST00000390612 UBE3CQ15386 1083 aa13.8□□□□□ -0.2
IGHV4-28-201ENST00000390612 SLFNL1Q499Z3 407 aa13.8□□□□□ -0.2
IGHV4-28-201ENST00000390612 GPAT2Q6NUI2 795 aa13.8□□□□□ -0.2
IGHV4-28-201ENST00000390612 PRRT2Q7Z6L0 340 aaPredicted RBP13.8□□□□□ -0.2
IGHV4-28-201ENST00000390612 ANKRD23Q86SG2 305 aa13.8□□□□□ -0.2
IGHV4-28-201ENST00000390612 BCL11AQ9H165 835 aa13.8□□□□□ -0.2
IGHV4-28-201ENST00000390612 PICK1Q9NRD5 415 aa13.8□□□□□ -0.2
IGHV4-28-201ENST00000390612 LOC285556D6RIA3 1793 aa13.8□□□□□ -0.2
IGHV4-28-201ENST00000390612 KIAA0100Q14667 2235 aaKnown RBP13.8□□□□□ -0.2
IGHV4-28-201ENST00000390612 MGAMO43451 1857 aa13.79□□□□□ -0.2
IGHV4-28-201ENST00000390612 CHGBP05060 677 aa13.79□□□□□ -0.2
IGHV4-28-201ENST00000390612 CAP1Q01518 475 aa13.79□□□□□ -0.2
IGHV4-28-201ENST00000390612 TAF1CQ15572 869 aaPredicted RBP13.79□□□□□ -0.2
IGHV4-28-201ENST00000390612 PI4K2BQ8TCG2 481 aa13.79□□□□□ -0.2
IGHV4-28-201ENST00000390612 OTUD7AQ8TE49 926 aaPredicted RBP13.79□□□□□ -0.2
IGHV4-28-201ENST00000390612 GCC1Q96CN9 775 aa13.79□□□□□ -0.2
IGHV4-28-201ENST00000390612 EHD4Q9H223 541 aa13.79□□□□□ -0.2
IGHV4-28-201ENST00000390612 ZFYVE28Q9HCC9 887 aa13.79□□□□□ -0.2
IGHV4-28-201ENST00000390612 GINM1Q9NU53 330 aa13.79□□□□□ -0.2
IGHV4-28-201ENST00000390612 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.79□□□□□ -0.2
IGHV4-28-201ENST00000390612 SAP30BPQ9UHR5 308 aaKnown RBP13.79□□□□□ -0.2
IGHV4-28-201ENST00000390612 TTC41PQ6P2S7 1318 aa13.79□□□□□ -0.2
IGHV4-28-201ENST00000390612 ADGRA2Q96PE1 1338 aa13.79□□□□□ -0.2
IGHV4-28-201ENST00000390612 TLR2O60603 784 aa13.78□□□□□ -0.2
IGHV4-28-201ENST00000390612 USP5P45974 858 aa13.78□□□□□ -0.2
IGHV4-28-201ENST00000390612 PKN2Q16513 984 aaKnown RBP13.78□□□□□ -0.2
IGHV4-28-201ENST00000390612 TSHZ3Q63HK5 1081 aa13.78□□□□□ -0.2
IGHV4-28-201ENST00000390612 TATDN1Q6P1N9 297 aa13.78□□□□□ -0.2
IGHV4-28-201ENST00000390612 LCORLQ8N3X6 602 aa13.78□□□□□ -0.2
IGHV4-28-201ENST00000390612 KBTBD3Q8NAB2 608 aa13.78□□□□□ -0.2
IGHV4-28-201ENST00000390612 EXOC6Q8TAG9 804 aa13.78□□□□□ -0.2
IGHV4-28-201ENST00000390612 TBC1D2Q9BYX2 928 aa13.78□□□□□ -0.2
IGHV4-28-201ENST00000390612 CRNKL1Q9BZJ0 848 aaKnown RBP13.78□□□□□ -0.2
IGHV4-28-201ENST00000390612 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.78□□□□□ -0.2
IGHV4-28-201ENST00000390612 ZSWIM8A7E2V4 1837 aa13.78□□□□□ -0.2
IGHV4-28-201ENST00000390612 HLA-DOAP06340 250 aa13.77□□□□□ -0.21
IGHV4-28-201ENST00000390612 PLCD1P51178 756 aa13.77□□□□□ -0.21
IGHV4-28-201ENST00000390612 SP3Q02447 781 aa13.77□□□□□ -0.21
IGHV4-28-201ENST00000390612 GABPAQ06546 454 aa13.77□□□□□ -0.21
IGHV4-28-201ENST00000390612 C17orf99Q6UX52 265 aa13.77□□□□□ -0.21
IGHV4-28-201ENST00000390612 FASTKD5Q7L8L6 764 aaKnown RBP13.77□□□□□ -0.21
IGHV4-28-201ENST00000390612 CCDC84Q86UT8 332 aaPredicted RBP13.77□□□□□ -0.21
IGHV4-28-201ENST00000390612 SMC5Q8IY18 1101 aa13.77□□□□□ -0.21
IGHV4-28-201ENST00000390612 GPATCH3Q96I76 525 aa13.77□□□□□ -0.21
IGHV4-28-201ENST00000390612 WDR18Q9BV38 432 aa13.77□□□□□ -0.21
IGHV4-28-201ENST00000390612 DCP1AQ9NPI6 582 aaPredicted RBP13.77□□□□□ -0.21
IGHV4-28-201ENST00000390612 STAP2Q9UGK3 403 aa13.77□□□□□ -0.21
IGHV4-28-201ENST00000390612 SERPINB13Q9UIV8 391 aa13.77□□□□□ -0.21
IGHV4-28-201ENST00000390612 SLC45A1Q9Y2W3 748 aa13.77□□□□□ -0.21
IGHV4-28-201ENST00000390612 SUPT16HQ9Y5B9 1047 aaKnown RBP13.77□□□□□ -0.21
IGHV4-28-201ENST00000390612 USP17L5A8MUK1 530 aa13.76□□□□□ -0.21
IGHV4-28-201ENST00000390612 PDHXO00330 501 aa13.76□□□□□ -0.21
IGHV4-28-201ENST00000390612 MBD4O95243 580 aa13.76□□□□□ -0.21
IGHV4-28-201ENST00000390612 ASNSP08243 561 aa13.76□□□□□ -0.21
IGHV4-28-201ENST00000390612 SHROOM1Q2M3G4 852 aaPredicted RBP13.76□□□□□ -0.21
IGHV4-28-201ENST00000390612 SH3D19Q5HYK7 790 aa13.76□□□□□ -0.21
IGHV4-28-201ENST00000390612 ZSCAN25Q6NSZ9 544 aa13.76□□□□□ -0.21
IGHV4-28-201ENST00000390612 OTOP1Q7RTM1 612 aa13.76□□□□□ -0.21
IGHV4-28-201ENST00000390612 TTC6Q86TZ1 520 aa13.76□□□□□ -0.21
IGHV4-28-201ENST00000390612 ZNF280CQ8ND82 737 aa13.76□□□□□ -0.21
IGHV4-28-201ENST00000390612 ERO1AQ96HE7 468 aa13.76□□□□□ -0.21
IGHV4-28-201ENST00000390612 PUS7LQ9H0K6 701 aaKnown RBP13.76□□□□□ -0.21
IGHV4-28-201ENST00000390612 ARMT1Q9H993 441 aa13.76□□□□□ -0.21
IGHV4-28-201ENST00000390612 PRKAB2O43741 272 aa13.75□□□□□ -0.21
IGHV4-28-201ENST00000390612 GLRX3O76003 335 aaKnown RBP13.75□□□□□ -0.21
IGHV4-28-201ENST00000390612 IGHDP01880 384 aa13.75□□□□□ -0.21
IGHV4-28-201ENST00000390612 SHMT1P34896 483 aa13.75□□□□□ -0.21
IGHV4-28-201ENST00000390612 EVX2Q03828 476 aa13.75□□□□□ -0.21
IGHV4-28-201ENST00000390612 SPP2Q13103 211 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms