RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 OSGEPQ9NPF4 335 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 C1GALT1Q9NS00 363 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 CABP1Q9NZU7 370 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 TMEM59LQ9UK28 342 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 LRFN2Q9ULH4 789 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 RTCBQ9Y3I0 505 aaKnown RBP0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 DAGLAQ9Y4D2 1042 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 LRP12Q9Y561 859 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 PCDHB11Q9Y5F2 797 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 ACTL7BQ9Y614 415 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 U3KQE9 123 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 SSPOA2VEC9 5147 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 DSTQ03001 7570 aaKnown RBP0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 DNAJC25-GNG10A0A024R161 153 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 CCDC187A0A096LP49 1063 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 LOC102724428A0A0B4J2F2 783 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 IGKV6D-41A0A0C4DH26 115 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 A0A1B0GTL3 188 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 SH3D21A4FU49 640 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 FITM1A5D6W6 292 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 DNAJC9-AS1A6NH13 148 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 MOXD2PA6NHM9 499 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 SFI1A8K8P3 1242 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 ERI2A8K979 691 aaKnown RBP0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 PATE3B3GLJ2 98 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 EML1O00423 815 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 IGF2BP3O00425 579 aaKnown RBP eCLIP0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 CDK2AP1O14519 115 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 ABLIM1O14639 778 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 GNPATO15228 680 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 RTL8CO15255 209 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 DYNC1LI2O43237 492 aaPredicted RBP0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 LAMTOR5O43504 91 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 EIF4EBP3O60516 100 aaPredicted RBP0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 ZNF623O75123 536 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 SMNDC1O75940 238 aaKnown RBP eCLIP0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 EYA4O95677 639 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 PSAPP07602 524 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 C1SP09871 688 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 RARAP10276 462 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 CHGAP10645 457 aaKnown RBP0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 PTPRAP18433 802 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 NDUFV2P19404 249 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 EPHA1P21709 976 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 CDC25BP30305 580 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 HOXC13P31276 330 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 VIPR1P32241 457 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 TRHRP34981 398 aaPredicted RBP0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 KRT2P35908 639 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 TXLNAP40222 546 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 MLLT3P42568 568 aaPredicted RBP0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 CCT4P50991 539 aaKnown RBP0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 ZNF81P51508 661 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 SIK1P57059 783 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 CABP4P57796 275 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 KRTAP12-2P59991 146 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 ERVFC1P60507 584 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 MDM2Q00987 491 aaPredicted RBP0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 KIAA2012Q0VF49 1180 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 FSTL1Q12841 308 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 CDK5R2Q13319 367 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 PDE3BQ13370 1112 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 TUBA3CQ13748 450 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 RAPGEF1Q13905 1077 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 SNX17Q15036 470 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 PRKD1Q15139 912 aaPredicted RBP0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 NR0B2Q15466 257 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 SURF1Q15526 300 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 HIF1AQ16665 826 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 VWA3BQ502W6 1294 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 MIDNQ504T8 468 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 USP39Q53GS9 565 aaKnown RBP0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 NAALADL2Q58DX5 795 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 HP1BP3Q5SSJ5 553 aaPredicted RBP0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 ADGRF1Q5T601 910 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 USPL1Q5W0Q7 1092 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 HEATR6Q6AI08 1181 aaKnown RBP0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 CYB5RLQ6IPT4 315 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 KIAA1161Q6NSJ0 714 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 TUBA3EQ6PEY2 450 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 NPNTQ6UXI9 565 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 ZNF627Q7L945 461 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 GPRIN1Q7Z2K8 1008 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 RD3Q7Z3Z2 195 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 LIMS2Q7Z4I7 341 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 SH2D6Q7Z4S9 175 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 PLEKHH3Q7Z736 793 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 SAPCD2Q86UD0 394 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 FAM124AQ86V42 546 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 SERINC5Q86VE9 423 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 ZNF761Q86XN6 746 aaPredicted RBP0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 IGDCC3Q8IVU1 814 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 ZC3H7AQ8IWR0 971 aaKnown RBP0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 ULK2Q8IYT8 1036 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 REXO1Q8N1G1 1221 aaKnown RBP0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 KRT78Q8N1N4 520 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 OXR1Q8N573 874 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 PDZD8Q8NEN9 1154 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 DNERQ8NFT8 737 aa0.05□□□□□ -2.4
TRAJ28-201ENST00000390509 ADAMTS15Q8TE58 950 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms