RNA–Protein interactions for RNA: ENST00000390446.3

TRAV18-201, Transcript of T cell receptor alpha variable 18, humanhuman

APPRIS P1 BASIC

Gene TRAV18, Length 440 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18-201ENST00000390446 SEMA6BQ9H3T3 888 aa12.13□□□□□ -0.47
TRAV18-201ENST00000390446 FAM196BA6NMK8 535 aa12.12□□□□□ -0.47
TRAV18-201ENST00000390446 USP17L5A8MUK1 530 aa12.12□□□□□ -0.47
TRAV18-201ENST00000390446 MYCNP04198 464 aaPredicted RBP12.12□□□□□ -0.47
TRAV18-201ENST00000390446 FGFR2P21802 821 aa12.12□□□□□ -0.47
TRAV18-201ENST00000390446 CCND3P30281 292 aaPredicted RBP12.12□□□□□ -0.47
TRAV18-201ENST00000390446 MAPK4P31152 587 aa12.12□□□□□ -0.47
TRAV18-201ENST00000390446 RGS2P41220 211 aa12.12□□□□□ -0.47
TRAV18-201ENST00000390446 ATP2B3Q16720 1220 aa12.12□□□□□ -0.47
TRAV18-201ENST00000390446 WDR78Q5VTH9 848 aa12.12□□□□□ -0.47
TRAV18-201ENST00000390446 SH3BP5LQ7L8J4 393 aa12.12□□□□□ -0.47
TRAV18-201ENST00000390446 TBC1D2Q9BYX2 928 aa12.12□□□□□ -0.47
TRAV18-201ENST00000390446 OSBPL5Q9H0X9 879 aaPredicted RBP12.12□□□□□ -0.47
TRAV18-201ENST00000390446 PRDM5Q9NQX1 630 aaPredicted RBP12.12□□□□□ -0.47
TRAV18-201ENST00000390446 CEP126Q9P2H0 1117 aa12.12□□□□□ -0.47
TRAV18-201ENST00000390446 ATP11BQ9Y2G3 1177 aa12.12□□□□□ -0.47
TRAV18-201ENST00000390446 EYA2O00167 538 aa12.11□□□□□ -0.47
TRAV18-201ENST00000390446 COL6A1P12109 1028 aa12.11□□□□□ -0.47
TRAV18-201ENST00000390446 XRCC5P13010 732 aaKnown RBP12.11□□□□□ -0.47
TRAV18-201ENST00000390446 BTDP43251 543 aa12.11□□□□□ -0.47
TRAV18-201ENST00000390446 MFSD14CQ5VZR4 134 aa12.11□□□□□ -0.47
TRAV18-201ENST00000390446 SPTY2D1Q68D10 685 aaPredicted RBP12.11□□□□□ -0.47
TRAV18-201ENST00000390446 PAGR1Q9BTK6 254 aa12.11□□□□□ -0.47
TRAV18-201ENST00000390446 TRIM34Q9BYJ4 488 aa12.11□□□□□ -0.47
TRAV18-201ENST00000390446 SIL1Q9H173 461 aa12.11□□□□□ -0.47
TRAV18-201ENST00000390446 GLRX3O76003 335 aaKnown RBP12.1□□□□□ -0.47
TRAV18-201ENST00000390446 MAP3K10Q02779 954 aa12.1□□□□□ -0.47
TRAV18-201ENST00000390446 SHHQ15465 462 aa12.1□□□□□ -0.47
TRAV18-201ENST00000390446 RABL6Q3YEC7 729 aaPredicted RBP12.1□□□□□ -0.47
TRAV18-201ENST00000390446 MAP3K21Q5TCX8 1036 aa12.1□□□□□ -0.47
TRAV18-201ENST00000390446 PLEKHH3Q7Z736 793 aa12.1□□□□□ -0.47
TRAV18-201ENST00000390446 ANKRD44Q8N8A2 993 aa12.1□□□□□ -0.47
TRAV18-201ENST00000390446 P2RX7Q99572 595 aaKnown RBP12.1□□□□□ -0.47
TRAV18-201ENST00000390446 MORF4L1Q9UBU8 362 aa12.1□□□□□ -0.47
TRAV18-201ENST00000390446 CUL9Q8IWT3 2517 aa12.1□□□□□ -0.47
TRAV18-201ENST00000390446 ATRNL1Q5VV63 1379 aa12.09□□□□□ -0.47
TRAV18-201ENST00000390446 TNFRSF10AO00220 468 aa12.09□□□□□ -0.47
TRAV18-201ENST00000390446 SEMA3EO15041 775 aa12.09□□□□□ -0.47
TRAV18-201ENST00000390446 TBC1D12O60347 775 aa12.09□□□□□ -0.47
TRAV18-201ENST00000390446 PEX10O60683 326 aa12.09□□□□□ -0.47
TRAV18-201ENST00000390446 CAP2P40123 477 aa12.09□□□□□ -0.47
TRAV18-201ENST00000390446 RTP1P59025 263 aa12.09□□□□□ -0.47
TRAV18-201ENST00000390446 ATP2B2Q01814 1243 aa12.09□□□□□ -0.47
TRAV18-201ENST00000390446 MTMR2Q13614 643 aa12.09□□□□□ -0.47
TRAV18-201ENST00000390446 CCL14Q16627 93 aa12.09□□□□□ -0.47
TRAV18-201ENST00000390446 LHX8Q68G74 356 aa12.09□□□□□ -0.47
TRAV18-201ENST00000390446 WDR63Q8IWG1 891 aa12.09□□□□□ -0.47
TRAV18-201ENST00000390446 EDC3Q96F86 508 aaKnown RBP12.09□□□□□ -0.47
TRAV18-201ENST00000390446 DDX4Q9NQI0 724 aaKnown RBP12.09□□□□□ -0.47
TRAV18-201ENST00000390446 SALL1Q9NSC2 1324 aa12.09□□□□□ -0.47
TRAV18-201ENST00000390446 TMEM265A0A087WTH1 108 aa12.08□□□□□ -0.48
TRAV18-201ENST00000390446 PHKA1P46020 1223 aa12.08□□□□□ -0.48
TRAV18-201ENST00000390446 HERVK_113P62684 666 aa12.08□□□□□ -0.48
TRAV18-201ENST00000390446 TJAP1Q5JTD0 557 aa12.08□□□□□ -0.48
TRAV18-201ENST00000390446 ERICH6Q7L0X2 663 aa12.08□□□□□ -0.48
TRAV18-201ENST00000390446 GPR142Q7Z601 462 aa12.08□□□□□ -0.48
TRAV18-201ENST00000390446 FAM122AQ96E09 287 aa12.08□□□□□ -0.48
TRAV18-201ENST00000390446 APBA2Q99767 749 aa12.08□□□□□ -0.48
TRAV18-201ENST00000390446 NOL10Q9BSC4 688 aaKnown RBP12.08□□□□□ -0.48
TRAV18-201ENST00000390446 NDUFB9Q9Y6M9 179 aa12.08□□□□□ -0.48
TRAV18-201ENST00000390446 DOCK2Q92608 1830 aa12.08□□□□□ -0.48
TRAV18-201ENST00000390446 UTYO14607 1347 aa12.08□□□□□ -0.48
TRAV18-201ENST00000390446 RANBP2P49792 3224 aaKnown RBP12.07□□□□□ -0.48
TRAV18-201ENST00000390446 CACNA1FO60840 1977 aa12.07□□□□□ -0.48
TRAV18-201ENST00000390446 KBTBD13C9JR72 458 aa12.07□□□□□ -0.48
TRAV18-201ENST00000390446 MSCO60682 206 aa12.07□□□□□ -0.48
TRAV18-201ENST00000390446 LDHCP07864 332 aa12.07□□□□□ -0.48
TRAV18-201ENST00000390446 BACE1P56817 501 aa12.07□□□□□ -0.48
TRAV18-201ENST00000390446 CCNA1P78396 465 aa12.07□□□□□ -0.48
TRAV18-201ENST00000390446 GSTO1P78417 241 aa12.07□□□□□ -0.48
TRAV18-201ENST00000390446 DOCK1Q14185 1865 aa12.07□□□□□ -0.48
TRAV18-201ENST00000390446 ARRDC4Q8NCT1 418 aa12.07□□□□□ -0.48
TRAV18-201ENST00000390446 IL27Q8NEV9 243 aa12.07□□□□□ -0.48
TRAV18-201ENST00000390446 PPM1EQ8WY54 764 aa12.07□□□□□ -0.48
TRAV18-201ENST00000390446 BADQ92934 168 aa12.07□□□□□ -0.48
TRAV18-201ENST00000390446 TXNRD2Q9NNW7 524 aa12.07□□□□□ -0.48
TRAV18-201ENST00000390446 IVNS1ABPQ9Y6Y0 642 aa12.07□□□□□ -0.48
TRAV18-201ENST00000390446 MROH7-TTC4A0A0A0MT08 1334 aa12.07□□□□□ -0.48
TRAV18-201ENST00000390446 GAKO14976 1311 aa12.07□□□□□ -0.48
TRAV18-201ENST00000390446 DOCK3Q8IZD9 2030 aa12.06□□□□□ -0.48
TRAV18-201ENST00000390446 COL6A3P12111 3177 aa12.06□□□□□ -0.48
TRAV18-201ENST00000390446 MYH13Q9UKX3 1938 aa12.06□□□□□ -0.48
TRAV18-201ENST00000390446 C19orf81C9J6K1 198 aa12.06□□□□□ -0.48
TRAV18-201ENST00000390446 USP17L10C9JJH3 530 aa12.06□□□□□ -0.48
TRAV18-201ENST00000390446 ERVK-9P63128 1117 aa12.06□□□□□ -0.48
TRAV18-201ENST00000390446 ERVK-24P63145 666 aa12.06□□□□□ -0.48
TRAV18-201ENST00000390446 SMAD3P84022 425 aaKnown RBP12.06□□□□□ -0.48
TRAV18-201ENST00000390446 Q3C1V9 767 aa12.06□□□□□ -0.48
TRAV18-201ENST00000390446 SH3D19Q5HYK7 790 aa12.06□□□□□ -0.48
TRAV18-201ENST00000390446 C9orf50Q5SZB4 431 aa12.06□□□□□ -0.48
TRAV18-201ENST00000390446 GJC2Q5T442 439 aaPredicted RBP12.06□□□□□ -0.48
TRAV18-201ENST00000390446 CRACR2BQ8N4Y2 399 aaPredicted RBP12.06□□□□□ -0.48
TRAV18-201ENST00000390446 GTF3C2Q8WUA4 911 aaPredicted RBP12.06□□□□□ -0.48
TRAV18-201ENST00000390446 LPAR1Q92633 364 aa12.06□□□□□ -0.48
TRAV18-201ENST00000390446 PORCNQ9H237 461 aa12.06□□□□□ -0.48
TRAV18-201ENST00000390446 RBPJLQ9UBG7 517 aa12.06□□□□□ -0.48
TRAV18-201ENST00000390446 DDX20Q9UHI6 824 aaKnown RBP12.06□□□□□ -0.48
TRAV18-201ENST00000390446 DNM1LO00429 736 aa12.05□□□□□ -0.48
TRAV18-201ENST00000390446 ASNSP08243 561 aa12.05□□□□□ -0.48
TRAV18-201ENST00000390446 HOXA7P31268 230 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms