RNA–Protein interactions for RNA: ENST00000389609.8

CCDC149-202, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC149, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-202ENST00000389609 TTLL11Q8NHH1 800 aa13.04□□□□□ -0.32
CCDC149-202ENST00000389609 SPATA20Q8TB22 786 aa13.04□□□□□ -0.32
CCDC149-202ENST00000389609 UBXN4Q92575 508 aa13.04□□□□□ -0.32
CCDC149-202ENST00000389609 STRBPQ96SI9 672 aaKnown RBP13.04□□□□□ -0.32
CCDC149-202ENST00000389609 NAA15Q9BXJ9 866 aaKnown RBP13.04□□□□□ -0.32
CCDC149-202ENST00000389609 IQSEC3Q9UPP2 1182 aaPredicted RBP13.04□□□□□ -0.32
CCDC149-202ENST00000389609 UBN2Q6ZU65 1347 aa13.04□□□□□ -0.32
CCDC149-202ENST00000389609 PNPLA7Q6ZV29 1317 aa13.04□□□□□ -0.32
CCDC149-202ENST00000389609 ERVV-1B6SEH8 477 aa13.03□□□□□ -0.32
CCDC149-202ENST00000389609 TADA3O75528 432 aa13.03□□□□□ -0.32
CCDC149-202ENST00000389609 ZRANB2O95218 330 aaKnown RBP eCLIP13.03□□□□□ -0.32
CCDC149-202ENST00000389609 MMP1P03956 469 aa13.03□□□□□ -0.32
CCDC149-202ENST00000389609 PDE6AP16499 860 aa13.03□□□□□ -0.32
CCDC149-202ENST00000389609 LDHAL6AQ6ZMR3 332 aa13.03□□□□□ -0.32
CCDC149-202ENST00000389609 TMEM139Q8IV31 216 aa13.03□□□□□ -0.32
CCDC149-202ENST00000389609 TRIM22Q8IYM9 498 aa13.03□□□□□ -0.32
CCDC149-202ENST00000389609 SYNE4Q8N205 404 aa13.03□□□□□ -0.32
CCDC149-202ENST00000389609 LPIN2Q92539 896 aa13.03□□□□□ -0.32
CCDC149-202ENST00000389609 STRN4Q9NRL3 753 aa13.03□□□□□ -0.32
CCDC149-202ENST00000389609 DEXIO95424 95 aa13.03□□□□□ -0.32
CCDC149-202ENST00000389609 PNMA6AP0CW24 399 aaPredicted RBP13.03□□□□□ -0.32
CCDC149-202ENST00000389609 NOP2P46087 812 aaKnown RBP13.03□□□□□ -0.32
CCDC149-202ENST00000389609 PLA2G4AP47712 749 aa13.03□□□□□ -0.32
CCDC149-202ENST00000389609 PUM3Q15397 648 aaKnown RBP13.03□□□□□ -0.32
CCDC149-202ENST00000389609 STAG1Q8WVM7 1258 aa13.03□□□□□ -0.32
CCDC149-202ENST00000389609 CCDC85AQ96PX6 553 aaPredicted RBP13.03□□□□□ -0.32
CCDC149-202ENST00000389609 RASSF4Q9H2L5 321 aa13.03□□□□□ -0.32
CCDC149-202ENST00000389609 RNF41Q9H4P4 317 aaPredicted RBP13.03□□□□□ -0.32
CCDC149-202ENST00000389609 FAM217BQ9NTX9 383 aaPredicted RBP13.03□□□□□ -0.32
CCDC149-202ENST00000389609 SLAIN2Q9P270 581 aa13.03□□□□□ -0.32
CCDC149-202ENST00000389609 RSPH14Q9UHP6 348 aa13.03□□□□□ -0.32
CCDC149-202ENST00000389609 ASAP1Q9ULH1 1129 aa13.03□□□□□ -0.32
CCDC149-202ENST00000389609 SLC12A7Q9Y666 1083 aa13.03□□□□□ -0.32
CCDC149-202ENST00000389609 ABCA3Q99758 1704 aa13.02□□□□□ -0.33
CCDC149-202ENST00000389609 PDE8AO60658 829 aa13.02□□□□□ -0.33
CCDC149-202ENST00000389609 FGFR2P21802 821 aa13.02□□□□□ -0.33
CCDC149-202ENST00000389609 ITGA6P23229 1130 aa13.02□□□□□ -0.33
CCDC149-202ENST00000389609 MARCKSP29966 332 aaPredicted RBP13.02□□□□□ -0.33
CCDC149-202ENST00000389609 CDC27P30260 824 aa13.02□□□□□ -0.33
CCDC149-202ENST00000389609 MORC3Q14149 939 aa13.02□□□□□ -0.33
CCDC149-202ENST00000389609 POSTNQ15063 836 aa13.02□□□□□ -0.33
CCDC149-202ENST00000389609 TMEM67Q5HYA8 995 aa13.02□□□□□ -0.33
CCDC149-202ENST00000389609 SPECC1LQ69YQ0 1117 aa13.02□□□□□ -0.33
CCDC149-202ENST00000389609 NLRP10Q86W26 655 aa13.02□□□□□ -0.33
CCDC149-202ENST00000389609 DNAJC10Q8IXB1 793 aa13.02□□□□□ -0.33
CCDC149-202ENST00000389609 TXLNBQ8N3L3 684 aa13.02□□□□□ -0.33
CCDC149-202ENST00000389609 MSL3Q8N5Y2 521 aaKnown RBP13.02□□□□□ -0.33
CCDC149-202ENST00000389609 GPR161Q8N6U8 529 aaKnown RBP13.02□□□□□ -0.33
CCDC149-202ENST00000389609 MNS1Q8NEH6 495 aa13.02□□□□□ -0.33
CCDC149-202ENST00000389609 AIDAQ96BJ3 306 aa13.02□□□□□ -0.33
CCDC149-202ENST00000389609 FAM89AQ96GI7 184 aa13.02□□□□□ -0.33
CCDC149-202ENST00000389609 GEMIN8Q9NWZ8 242 aaKnown RBP13.02□□□□□ -0.33
CCDC149-202ENST00000389609 TMOD3Q9NYL9 352 aa13.02□□□□□ -0.33
CCDC149-202ENST00000389609 PCDHA5Q9Y5H7 936 aa13.02□□□□□ -0.33
CCDC149-202ENST00000389609 SRPRBQ9Y5M8 271 aaKnown RBP13.02□□□□□ -0.33
CCDC149-202ENST00000389609 CLCN6P51797 869 aa13.01□□□□□ -0.33
CCDC149-202ENST00000389609 MAP3K12Q12852 859 aa13.01□□□□□ -0.33
CCDC149-202ENST00000389609 AKNAD1Q5T1N1 836 aa13.01□□□□□ -0.33
CCDC149-202ENST00000389609 TMCO3Q6UWJ1 677 aa13.01□□□□□ -0.33
CCDC149-202ENST00000389609 PI16Q6UXB8 463 aa13.01□□□□□ -0.33
CCDC149-202ENST00000389609 PIGBQ92521 554 aa13.01□□□□□ -0.33
CCDC149-202ENST00000389609 PANX2Q96RD6 677 aa13.01□□□□□ -0.33
CCDC149-202ENST00000389609 PYM1Q9BRP8 204 aaKnown RBP13.01□□□□□ -0.33
CCDC149-202ENST00000389609 ZNF532Q9HCE3 1301 aa13.01□□□□□ -0.33
CCDC149-202ENST00000389609 RANBP6O60518 1105 aaKnown RBP13.01□□□□□ -0.33
CCDC149-202ENST00000389609 PCP11498 1178 aaKnown RBP13.01□□□□□ -0.33
CCDC149-202ENST00000389609 ATP1A3P13637 1013 aa13.01□□□□□ -0.33
CCDC149-202ENST00000389609 MAP3K9P80192 1104 aa13.01□□□□□ -0.33
CCDC149-202ENST00000389609 PNOCQ13519 176 aa13.01□□□□□ -0.33
CCDC149-202ENST00000389609 LONRF3Q496Y0 759 aa13.01□□□□□ -0.33
CCDC149-202ENST00000389609 BAG1Q99933 345 aaPredicted RBP13.01□□□□□ -0.33
CCDC149-202ENST00000389609 NACAP1Q9BZK3 213 aa13.01□□□□□ -0.33
CCDC149-202ENST00000389609 CNNM1Q9NRU3 951 aa13.01□□□□□ -0.33
CCDC149-202ENST00000389609 FBXO2Q9UK22 296 aaPredicted RBP13.01□□□□□ -0.33
CCDC149-202ENST00000389609 PPP2R2CQ9Y2T4 447 aa13.01□□□□□ -0.33
CCDC149-202ENST00000389609 ZNF330Q9Y3S2 320 aaPredicted RBP13.01□□□□□ -0.33
CCDC149-202ENST00000389609 PARP3Q9Y6F1 533 aa13.01□□□□□ -0.33
CCDC149-202ENST00000389609 RTL9Q8NET4 1388 aa13.01□□□□□ -0.33
CCDC149-202ENST00000389609 CHD4Q14839 1912 aa13.01□□□□□ -0.33
CCDC149-202ENST00000389609 TNNT3P45378 269 aaPredicted RBP13□□□□□ -0.33
CCDC149-202ENST00000389609 NT5C2P49902 561 aa13□□□□□ -0.33
CCDC149-202ENST00000389609 ERCC6LQ2NKX8 1250 aa13□□□□□ -0.33
CCDC149-202ENST00000389609 ARHGAP29Q52LW3 1261 aa13□□□□□ -0.33
CCDC149-202ENST00000389609 TEX35Q5T0J7 233 aa13□□□□□ -0.33
CCDC149-202ENST00000389609 NFXL1Q6ZNB6 911 aa13□□□□□ -0.33
CCDC149-202ENST00000389609 IFNL3Q8IZI9 196 aa13□□□□□ -0.33
CCDC149-202ENST00000389609 NEK11Q8NG66 645 aa13□□□□□ -0.33
CCDC149-202ENST00000389609 SMARCE1Q969G3 411 aa13□□□□□ -0.33
CCDC149-202ENST00000389609 CCDC51Q96ER9 411 aa13□□□□□ -0.33
CCDC149-202ENST00000389609 CTAGE1Q96RT6 745 aa13□□□□□ -0.33
CCDC149-202ENST00000389609 NAPBQ9H115 298 aa13□□□□□ -0.33
CCDC149-202ENST00000389609 PIH1D3Q9NQM4 214 aaKnown RBP13□□□□□ -0.33
CCDC149-202ENST00000389609 MAN1B1Q9UKM7 699 aa13□□□□□ -0.33
CCDC149-202ENST00000389609 VWA3AA6NCI4 1184 aa13□□□□□ -0.33
CCDC149-202ENST00000389609 B4E1Z4 1266 aa13□□□□□ -0.33
CCDC149-202ENST00000389609 POTEB2H3BUK9 544 aa13□□□□□ -0.33
CCDC149-202ENST00000389609 XBP1P17861 261 aa13□□□□□ -0.33
CCDC149-202ENST00000389609 PLCD1P51178 756 aa13□□□□□ -0.33
CCDC149-202ENST00000389609 HLFQ16534 295 aa13□□□□□ -0.33
CCDC149-202ENST00000389609 ISM2Q6H9L7 571 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms