RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 IL15P40933 162 aaPredicted RBP26.54■■□□□ 1.84
CNEP1R1-201ENST00000389134 GJD2Q9UKL4 321 aa26.54■■□□□ 1.84
CNEP1R1-201ENST00000389134 STXBP5LQ9Y2K9 1186 aa26.54■■□□□ 1.84
CNEP1R1-201ENST00000389134 PDS5AQ29RF7 1337 aaKnown RBP26.54■■□□□ 1.84
CNEP1R1-201ENST00000389134 SPP2Q13103 211 aa26.53■■□□□ 1.84
CNEP1R1-201ENST00000389134 ZNF280CQ8ND82 737 aa26.53■■□□□ 1.84
CNEP1R1-201ENST00000389134 SSH1Q8WYL5 1049 aa26.53■■□□□ 1.84
CNEP1R1-201ENST00000389134 C11orf49Q9H6J7 331 aa26.53■■□□□ 1.84
CNEP1R1-201ENST00000389134 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.53■■□□□ 1.84
CNEP1R1-201ENST00000389134 MROH7-TTC4A0A0A0MT08 1334 aa26.52■■□□□ 1.84
CNEP1R1-201ENST00000389134 TDHQ8IZJ6 230 aa26.52■■□□□ 1.84
CNEP1R1-201ENST00000389134 OGDHLQ9ULD0 1010 aa26.52■■□□□ 1.84
CNEP1R1-201ENST00000389134 GPR75-ASB3A0A0A6YYF3 556 aa26.51■■□□□ 1.83
CNEP1R1-201ENST00000389134 ANP32CO43423 234 aa26.51■■□□□ 1.83
CNEP1R1-201ENST00000389134 UBTFL1P0CB47 393 aaPredicted RBP26.51■■□□□ 1.83
CNEP1R1-201ENST00000389134 MAGEA10P43363 369 aaPredicted RBP26.51■■□□□ 1.83
CNEP1R1-201ENST00000389134 RASGRF1Q13972 1273 aa26.51■■□□□ 1.83
CNEP1R1-201ENST00000389134 LAMA2P24043 3122 aaKnown RBP26.51■■□□□ 1.83
CNEP1R1-201ENST00000389134 DNAH12Q6ZR08 3092 aa26.51■■□□□ 1.83
CNEP1R1-201ENST00000389134 ZNF521Q96K83 1311 aa26.5■■□□□ 1.83
CNEP1R1-201ENST00000389134 SYN1P17600 705 aa26.5■■□□□ 1.83
CNEP1R1-201ENST00000389134 ADORA1P30542 326 aa26.5■■□□□ 1.83
CNEP1R1-201ENST00000389134 HMGCS2P54868 508 aa26.5■■□□□ 1.83
CNEP1R1-201ENST00000389134 Q7L0L9 218 aa26.5■■□□□ 1.83
CNEP1R1-201ENST00000389134 ASCC2Q9H1I8 757 aaPredicted RBP26.5■■□□□ 1.83
CNEP1R1-201ENST00000389134 MAP4K4O95819 1239 aaPredicted RBP26.49■■□□□ 1.83
CNEP1R1-201ENST00000389134 RHBDL3P58872 404 aa26.49■■□□□ 1.83
CNEP1R1-201ENST00000389134 TRIM32Q13049 653 aa26.49■■□□□ 1.83
CNEP1R1-201ENST00000389134 ERICH6Q7L0X2 663 aa26.49■■□□□ 1.83
CNEP1R1-201ENST00000389134 MTMR10Q9NXD2 777 aa26.49■■□□□ 1.83
CNEP1R1-201ENST00000389134 HDAC5Q9UQL6 1122 aa26.49■■□□□ 1.83
CNEP1R1-201ENST00000389134 SH3D19Q5HYK7 790 aa26.48■■□□□ 1.83
CNEP1R1-201ENST00000389134 UBE2OQ9C0C9 1292 aaKnown RBP26.48■■□□□ 1.83
CNEP1R1-201ENST00000389134 MORF4L1Q9UBU8 362 aa26.48■■□□□ 1.83
CNEP1R1-201ENST00000389134 COL2A1P02458 1487 aaPredicted RBP26.48■■□□□ 1.83
CNEP1R1-201ENST00000389134 FAM196BA6NMK8 535 aa26.47■■□□□ 1.83
CNEP1R1-201ENST00000389134 USP17L5A8MUK1 530 aa26.47■■□□□ 1.83
CNEP1R1-201ENST00000389134 CAP2P40123 477 aa26.47■■□□□ 1.83
CNEP1R1-201ENST00000389134 MECOMQ03112 1051 aa26.47■■□□□ 1.83
CNEP1R1-201ENST00000389134 FAM9BQ8IZU0 186 aa26.47■■□□□ 1.83
CNEP1R1-201ENST00000389134 TRIB2Q92519 343 aa26.47■■□□□ 1.83
CNEP1R1-201ENST00000389134 COPRSQ9NQ92 184 aa26.47■■□□□ 1.83
CNEP1R1-201ENST00000389134 LDHCP07864 332 aa26.46■■□□□ 1.83
CNEP1R1-201ENST00000389134 TIMM10P62072 90 aa26.46■■□□□ 1.83
CNEP1R1-201ENST00000389134 MAP3K21Q5TCX8 1036 aa26.46■■□□□ 1.83
CNEP1R1-201ENST00000389134 AS3MTQ9HBK9 375 aa26.46■■□□□ 1.83
CNEP1R1-201ENST00000389134 PA2G4Q9UQ80 394 aaKnown RBP26.46■■□□□ 1.83
CNEP1R1-201ENST00000389134 XRCC5P13010 732 aaKnown RBP26.45■■□□□ 1.82
CNEP1R1-201ENST00000389134 CYP2B6P20813 491 aa26.45■■□□□ 1.82
CNEP1R1-201ENST00000389134 PRKAR2AP13861 404 aaKnown RBP26.44■■□□□ 1.82
CNEP1R1-201ENST00000389134 GSTO1P78417 241 aa26.44■■□□□ 1.82
CNEP1R1-201ENST00000389134 ALDH1L2Q3SY69 923 aa26.44■■□□□ 1.82
CNEP1R1-201ENST00000389134 TRMT44Q8IYL2 757 aaKnown RBP26.44■■□□□ 1.82
CNEP1R1-201ENST00000389134 SOCS4Q8WXH5 440 aa26.44■■□□□ 1.82
CNEP1R1-201ENST00000389134 NUDT12Q9BQG2 462 aa26.44■■□□□ 1.82
CNEP1R1-201ENST00000389134 AKAP2Q9Y2D5 859 aa26.44■■□□□ 1.82
CNEP1R1-201ENST00000389134 PFASO15067 1338 aa26.43■■□□□ 1.82
CNEP1R1-201ENST00000389134 E9PSI1 815 aa26.43■■□□□ 1.82
CNEP1R1-201ENST00000389134 IRX3P78415 501 aaPredicted RBP26.43■■□□□ 1.82
CNEP1R1-201ENST00000389134 MVPQ14764 893 aaKnown RBP26.43■■□□□ 1.82
CNEP1R1-201ENST00000389134 ZNF384Q8TF68 577 aa26.43■■□□□ 1.82
CNEP1R1-201ENST00000389134 XAGE2Q96GT9 111 aa26.43■■□□□ 1.82
CNEP1R1-201ENST00000389134 HERC5Q9UII4 1024 aaKnown RBP26.43■■□□□ 1.82
CNEP1R1-201ENST00000389134 A0A1B0GUL7 405 aa26.42■■□□□ 1.82
CNEP1R1-201ENST00000389134 HOXA7P31268 230 aaPredicted RBP26.42■■□□□ 1.82
CNEP1R1-201ENST00000389134 WDR18Q9BV38 432 aa26.42■■□□□ 1.82
CNEP1R1-201ENST00000389134 RRP1BQ14684 758 aaKnown RBP26.41■■□□□ 1.82
CNEP1R1-201ENST00000389134 GPRC5AQ8NFJ5 357 aa26.41■■□□□ 1.82
CNEP1R1-201ENST00000389134 TMOD4Q9NZQ9 345 aa26.41■■□□□ 1.82
CNEP1R1-201ENST00000389134 COL6A1P12109 1028 aa26.4■■□□□ 1.82
CNEP1R1-201ENST00000389134 BACE1P56817 501 aa26.4■■□□□ 1.82
CNEP1R1-201ENST00000389134 NSUN4Q96CB9 384 aaKnown RBP26.4■■□□□ 1.82
CNEP1R1-201ENST00000389134 P2RX7Q99572 595 aaKnown RBP26.4■■□□□ 1.82
CNEP1R1-201ENST00000389134 PI4KBQ9UBF8 816 aa26.4■■□□□ 1.82
CNEP1R1-201ENST00000389134 MAPK4P31152 587 aa26.39■■□□□ 1.82
CNEP1R1-201ENST00000389134 PDE3AQ14432 1141 aa26.39■■□□□ 1.82
CNEP1R1-201ENST00000389134 SMC4Q9NTJ3 1288 aa26.39■■□□□ 1.82
CNEP1R1-201ENST00000389134 FRMPD3Q5JV73 1810 aa26.39■■□□□ 1.81
CNEP1R1-201ENST00000389134 CDK5RAP2Q96SN8 1893 aa26.38■■□□□ 1.81
CNEP1R1-201ENST00000389134 SIPA1L1O43166 1804 aa26.38■■□□□ 1.81
CNEP1R1-201ENST00000389134 ASNSP08243 561 aa26.38■■□□□ 1.81
CNEP1R1-201ENST00000389134 ZKSCAN1P17029 563 aaPredicted RBP26.38■■□□□ 1.81
CNEP1R1-201ENST00000389134 HERVK_113P62684 666 aa26.38■■□□□ 1.81
CNEP1R1-201ENST00000389134 CACNB2Q08289 660 aaPredicted RBP26.38■■□□□ 1.81
CNEP1R1-201ENST00000389134 MTMR2Q13614 643 aa26.38■■□□□ 1.81
CNEP1R1-201ENST00000389134 TEX11Q8IYF3 940 aa26.38■■□□□ 1.81
CNEP1R1-201ENST00000389134 C19orf81C9J6K1 198 aa26.37■■□□□ 1.81
CNEP1R1-201ENST00000389134 SPATA5Q8NB90 893 aa26.37■■□□□ 1.81
CNEP1R1-201ENST00000389134 DHX36Q9H2U1 1008 aaKnown RBP26.37■■□□□ 1.81
CNEP1R1-201ENST00000389134 TXNRD2Q9NNW7 524 aa26.37■■□□□ 1.81
CNEP1R1-201ENST00000389134 HMG20BQ9P0W2 317 aa26.37■■□□□ 1.81
CNEP1R1-201ENST00000389134 TFCP2Q12800 502 aa26.36■■□□□ 1.81
CNEP1R1-201ENST00000389134 FAM109BQ6ICB4 259 aaPredicted RBP26.36■■□□□ 1.81
CNEP1R1-201ENST00000389134 CCAR1Q8IX12 1150 aaKnown RBP26.36■■□□□ 1.81
CNEP1R1-201ENST00000389134 GTF3C2Q8WUA4 911 aaPredicted RBP26.36■■□□□ 1.81
CNEP1R1-201ENST00000389134 RAI14Q9P0K7 980 aa26.36■■□□□ 1.81
CNEP1R1-201ENST00000389134 FOCADQ5VW36 1801 aa26.35■■□□□ 1.81
CNEP1R1-201ENST00000389134 RGS2P41220 211 aa26.35■■□□□ 1.81
CNEP1R1-201ENST00000389134 LRRC26Q2I0M4 334 aa26.35■■□□□ 1.81
CNEP1R1-201ENST00000389134 LHX8Q68G74 356 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms