RNA–Protein interactions for RNA: ENST00000383831.7

CPNE9-202, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-202ENST00000383831 ZBTB43O43298 467 aa23.79■■□□□ 1.4
CPNE9-202ENST00000383831 PPFIA3O75145 1194 aa23.79■■□□□ 1.4
CPNE9-202ENST00000383831 RXRAP19793 462 aa23.79■■□□□ 1.4
CPNE9-202ENST00000383831 FOXD4L6Q3SYB3 417 aaPredicted RBP23.79■■□□□ 1.4
CPNE9-202ENST00000383831 FOXD4L3Q6VB84 417 aaPredicted RBP23.79■■□□□ 1.4
CPNE9-202ENST00000383831 MICU3Q86XE3 530 aa23.79■■□□□ 1.4
CPNE9-202ENST00000383831 PSMD1Q99460 953 aa23.79■■□□□ 1.4
CPNE9-202ENST00000383831 MYL10Q9BUA6 226 aa23.79■■□□□ 1.4
CPNE9-202ENST00000383831 SAP30BPQ9UHR5 308 aaKnown RBP23.79■■□□□ 1.4
CPNE9-202ENST00000383831 USP17L3A6NCW0 530 aa23.78■■□□□ 1.4
CPNE9-202ENST00000383831 USP17L4A6NCW7 530 aa23.78■■□□□ 1.4
CPNE9-202ENST00000383831 PDE4BQ07343 736 aa23.78■■□□□ 1.4
CPNE9-202ENST00000383831 SEC23AQ15436 765 aa23.78■■□□□ 1.4
CPNE9-202ENST00000383831 USP17L1Q7RTZ2 530 aa23.78■■□□□ 1.4
CPNE9-202ENST00000383831 AMOTL1Q8IY63 956 aa23.78■■□□□ 1.4
CPNE9-202ENST00000383831 SLC12A7Q9Y666 1083 aa23.78■■□□□ 1.4
CPNE9-202ENST00000383831 HHIPL2Q6UWX4 724 aa23.78■■□□□ 1.4
CPNE9-202ENST00000383831 ZSCAN10Q96SZ4 725 aaPredicted RBP23.78■■□□□ 1.4
CPNE9-202ENST00000383831 LMBRD1Q9NUN5 540 aa23.78■■□□□ 1.4
CPNE9-202ENST00000383831 PIM2Q9P1W9 311 aa23.78■■□□□ 1.4
CPNE9-202ENST00000383831 CPLX1O14810 134 aa23.77■■□□□ 1.4
CPNE9-202ENST00000383831 FDPSP14324 419 aaKnown RBP23.77■■□□□ 1.4
CPNE9-202ENST00000383831 TMTC2Q8N394 836 aa23.77■■□□□ 1.4
CPNE9-202ENST00000383831 TEKT1Q969V4 418 aa23.77■■□□□ 1.4
CPNE9-202ENST00000383831 DYNLL2Q96FJ2 89 aa23.77■■□□□ 1.4
CPNE9-202ENST00000383831 GOLGA8AA7E2F4 631 aa23.76■■□□□ 1.39
CPNE9-202ENST00000383831 YDJCA8MPS7 323 aa23.76■■□□□ 1.39
CPNE9-202ENST00000383831 POLR3DP05423 398 aaPredicted RBP23.76■■□□□ 1.39
CPNE9-202ENST00000383831 CDC27P30260 824 aa23.76■■□□□ 1.39
CPNE9-202ENST00000383831 PLCD1P51178 756 aa23.76■■□□□ 1.39
CPNE9-202ENST00000383831 KIAA0825Q8IV33 1275 aa23.76■■□□□ 1.39
CPNE9-202ENST00000383831 CCDC144CPQ8IYA2 1237 aa23.76■■□□□ 1.39
CPNE9-202ENST00000383831 KIF3AQ9Y496 699 aa23.76■■□□□ 1.39
CPNE9-202ENST00000383831 MYH1P12882 1939 aa23.76■■□□□ 1.39
CPNE9-202ENST00000383831 NID2Q14112 1375 aa23.76■■□□□ 1.39
CPNE9-202ENST00000383831 ADD1P35611 737 aaKnown RBP23.75■■□□□ 1.39
CPNE9-202ENST00000383831 FAM47AQ5JRC9 791 aa23.75■■□□□ 1.39
CPNE9-202ENST00000383831 IQCA1Q86XH1 822 aa23.75■■□□□ 1.39
CPNE9-202ENST00000383831 ENAHQ8N8S7 591 aaPredicted RBP23.75■■□□□ 1.39
CPNE9-202ENST00000383831 SGIP1Q9BQI5 828 aa23.75■■□□□ 1.39
CPNE9-202ENST00000383831 FAM217BQ9NTX9 383 aaPredicted RBP23.75■■□□□ 1.39
CPNE9-202ENST00000383831 ATP6V1DQ9Y5K8 247 aa23.75■■□□□ 1.39
CPNE9-202ENST00000383831 CRKP46108 304 aa23.75■■□□□ 1.39
CPNE9-202ENST00000383831 SYNE3Q6ZMZ3 975 aa23.75■■□□□ 1.39
CPNE9-202ENST00000383831 FERMT3Q86UX7 667 aa23.75■■□□□ 1.39
CPNE9-202ENST00000383831 BRCA1P38398 1863 aaKnown RBP23.74■■□□□ 1.39
CPNE9-202ENST00000383831 PSDA5PKW4 1024 aaPredicted RBP23.74■■□□□ 1.39
CPNE9-202ENST00000383831 PRPF40AO75400 957 aaKnown RBP23.74■■□□□ 1.39
CPNE9-202ENST00000383831 APOBEC3HQ6NTF7 200 aaKnown RBP23.74■■□□□ 1.39
CPNE9-202ENST00000383831 ZNF277Q9NRM2 450 aaPredicted RBP23.74■■□□□ 1.39
CPNE9-202ENST00000383831 USP40Q9NVE5 1235 aa23.74■■□□□ 1.39
CPNE9-202ENST00000383831 PSME4Q14997 1843 aa23.74■■□□□ 1.39
CPNE9-202ENST00000383831 COL4A5P29400 1685 aa23.74■■□□□ 1.39
CPNE9-202ENST00000383831 H3BQV1 296 aa23.73■■□□□ 1.39
CPNE9-202ENST00000383831 FOSBP53539 338 aa23.73■■□□□ 1.39
CPNE9-202ENST00000383831 SKOR2Q2VWA4 1001 aaPredicted RBP23.73■■□□□ 1.39
CPNE9-202ENST00000383831 SOGA3Q5TF21 947 aa23.73■■□□□ 1.39
CPNE9-202ENST00000383831 IFFO2Q5TF58 517 aa23.73■■□□□ 1.39
CPNE9-202ENST00000383831 ZNF654Q8IZM8 581 aa23.73■■□□□ 1.39
CPNE9-202ENST00000383831 MRIQ9BWK5 157 aa23.73■■□□□ 1.39
CPNE9-202ENST00000383831 TCHHQ07283 1943 aa23.73■■□□□ 1.39
CPNE9-202ENST00000383831 WDHD1O75717 1129 aaPredicted RBP23.73■■□□□ 1.39
CPNE9-202ENST00000383831 PICALMQ13492 652 aa23.73■■□□□ 1.39
CPNE9-202ENST00000383831 CDC42EP5Q6NZY7 148 aa23.73■■□□□ 1.39
CPNE9-202ENST00000383831 ZDHHC15Q96MV8 337 aa23.73■■□□□ 1.39
CPNE9-202ENST00000383831 ORC3Q9UBD5 711 aaPredicted RBP23.73■■□□□ 1.39
CPNE9-202ENST00000383831 PPP1R1BQ9UD71 204 aaPredicted RBP23.73■■□□□ 1.39
CPNE9-202ENST00000383831 TSPY2A6NKD2 308 aa23.72■■□□□ 1.39
CPNE9-202ENST00000383831 NMT2O60551 498 aa23.72■■□□□ 1.39
CPNE9-202ENST00000383831 RCAN1P53805 252 aa23.72■■□□□ 1.39
CPNE9-202ENST00000383831 NTRK3Q16288 839 aa23.72■■□□□ 1.39
CPNE9-202ENST00000383831 DALRD3Q5D0E6 543 aaKnown RBP23.72■■□□□ 1.39
CPNE9-202ENST00000383831 IFIT1BQ5T764 474 aaKnown RBP23.72■■□□□ 1.39
CPNE9-202ENST00000383831 LARGE2Q8N3Y3 721 aa23.72■■□□□ 1.39
CPNE9-202ENST00000383831 SLC44A5Q8NCS7 719 aa23.72■■□□□ 1.39
CPNE9-202ENST00000383831 DDX4Q9NQI0 724 aaKnown RBP23.72■■□□□ 1.39
CPNE9-202ENST00000383831 CNPY2Q9Y2B0 182 aa23.72■■□□□ 1.39
CPNE9-202ENST00000383831 ECM29Q5VYK3 1845 aa23.72■■□□□ 1.39
CPNE9-202ENST00000383831 CDKL5O76039 1030 aa23.71■■□□□ 1.39
CPNE9-202ENST00000383831 NT5C2P49902 561 aa23.71■■□□□ 1.39
CPNE9-202ENST00000383831 HDLBPQ00341 1268 aaKnown RBP23.71■■□□□ 1.39
CPNE9-202ENST00000383831 MKNK2Q9HBH9 465 aa23.71■■□□□ 1.39
CPNE9-202ENST00000383831 GDPD2Q9HCC8 539 aa23.71■■□□□ 1.39
CPNE9-202ENST00000383831 PCDHAC2Q9Y5I4 1007 aa23.71■■□□□ 1.39
CPNE9-202ENST00000383831 DNM1Q05193 864 aaKnown RBP23.7■■□□□ 1.39
CPNE9-202ENST00000383831 CPLX2Q6PUV4 134 aaKnown RBP23.7■■□□□ 1.39
CPNE9-202ENST00000383831 C16orf86Q6ZW13 317 aa23.7■■□□□ 1.39
CPNE9-202ENST00000383831 TFAP4Q01664 338 aa23.7■■□□□ 1.38
CPNE9-202ENST00000383831 RESTQ13127 1097 aa23.7■■□□□ 1.38
CPNE9-202ENST00000383831 RTN1Q16799 776 aa23.7■■□□□ 1.38
CPNE9-202ENST00000383831 KLHL34Q8N239 644 aa23.7■■□□□ 1.38
CPNE9-202ENST00000383831 NUP133Q8WUM0 1156 aa23.7■■□□□ 1.38
CPNE9-202ENST00000383831 VPS33BQ9H267 617 aa23.7■■□□□ 1.38
CPNE9-202ENST00000383831 PTGER2P43116 358 aa23.69■■□□□ 1.38
CPNE9-202ENST00000383831 CD2APQ9Y5K6 639 aa23.69■■□□□ 1.38
CPNE9-202ENST00000383831 DDX49Q9Y6V7 483 aaKnown RBP23.69■■□□□ 1.38
CPNE9-202ENST00000383831 RASA1P20936 1047 aa23.68■■□□□ 1.38
CPNE9-202ENST00000383831 CDK8P49336 464 aa23.68■■□□□ 1.38
CPNE9-202ENST00000383831 FAM173BQ6P4H8 233 aa23.68■■□□□ 1.38
CPNE9-202ENST00000383831 FANCBQ8NB91 859 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms