RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 ALG1Q9BT22 464 aa16.55■□□□□ 0.24
CLCN4-201ENST00000380829 NUP62CLQ9H1M0 184 aa16.55■□□□□ 0.24
CLCN4-201ENST00000380829 KIF28PB7ZC32 967 aa16.54■□□□□ 0.24
CLCN4-201ENST00000380829 USP17L12C9JPN9 530 aa16.54■□□□□ 0.24
CLCN4-201ENST00000380829 USP17L21D6R901 530 aa16.54■□□□□ 0.24
CLCN4-201ENST00000380829 POLRMTO00411 1230 aaKnown RBP16.54■□□□□ 0.24
CLCN4-201ENST00000380829 SYNE3Q6ZMZ3 975 aa16.54■□□□□ 0.24
CLCN4-201ENST00000380829 UBAC1Q9BSL1 405 aa16.54■□□□□ 0.24
CLCN4-201ENST00000380829 RCOR1Q9UKL0 485 aa16.54■□□□□ 0.24
CLCN4-201ENST00000380829 UFL1O94874 794 aa16.54■□□□□ 0.24
CLCN4-201ENST00000380829 ESR2Q92731 530 aa16.54■□□□□ 0.24
CLCN4-201ENST00000380829 RBM17Q96I25 401 aaKnown RBP16.54■□□□□ 0.24
CLCN4-201ENST00000380829 FUCA2Q9BTY2 467 aa16.54■□□□□ 0.24
CLCN4-201ENST00000380829 SPTLC3Q9NUV7 552 aa16.54■□□□□ 0.24
CLCN4-201ENST00000380829 IARSP41252 1262 aaKnown RBP16.53■□□□□ 0.24
CLCN4-201ENST00000380829 ZNF827Q17R98 1081 aa16.53■□□□□ 0.24
CLCN4-201ENST00000380829 ANKRD7Q92527 254 aa16.53■□□□□ 0.24
CLCN4-201ENST00000380829 DCP1AQ9NPI6 582 aaPredicted RBP16.53■□□□□ 0.24
CLCN4-201ENST00000380829 TNKSO95271 1327 aa16.53■□□□□ 0.24
CLCN4-201ENST00000380829 GRIK5Q16478 980 aa16.53■□□□□ 0.24
CLCN4-201ENST00000380829 SLC4A8Q2Y0W8 1093 aa16.53■□□□□ 0.24
CLCN4-201ENST00000380829 ZNF804AQ7Z570 1209 aa16.53■□□□□ 0.24
CLCN4-201ENST00000380829 CKAP2LQ8IYA6 745 aa16.53■□□□□ 0.24
CLCN4-201ENST00000380829 PLCD3Q8N3E9 789 aa16.53■□□□□ 0.24
CLCN4-201ENST00000380829 CCDC82Q8N4S0 544 aa16.53■□□□□ 0.24
CLCN4-201ENST00000380829 TDRD7Q8NHU6 1098 aaKnown RBP16.53■□□□□ 0.24
CLCN4-201ENST00000380829 NUP133Q8WUM0 1156 aa16.53■□□□□ 0.24
CLCN4-201ENST00000380829 SLC26A6Q9BXS9 759 aa16.53■□□□□ 0.24
CLCN4-201ENST00000380829 CRNKL1Q9BZJ0 848 aaKnown RBP16.53■□□□□ 0.24
CLCN4-201ENST00000380829 LDHBP07195 334 aaKnown RBP16.52■□□□□ 0.24
CLCN4-201ENST00000380829 PLCB2Q00722 1185 aa16.52■□□□□ 0.24
CLCN4-201ENST00000380829 KIF23Q02241 960 aaPredicted RBP16.52■□□□□ 0.24
CLCN4-201ENST00000380829 MAP3K11Q16584 847 aa16.52■□□□□ 0.24
CLCN4-201ENST00000380829 CMTR1Q8N1G2 835 aaKnown RBP16.52■□□□□ 0.24
CLCN4-201ENST00000380829 TNMDQ9H2S6 317 aa16.52■□□□□ 0.24
CLCN4-201ENST00000380829 RTN1Q16799 776 aa16.51■□□□□ 0.23
CLCN4-201ENST00000380829 SPTY2D1Q68D10 685 aaPredicted RBP16.51■□□□□ 0.23
CLCN4-201ENST00000380829 KRT40Q6A162 431 aa16.51■□□□□ 0.23
CLCN4-201ENST00000380829 ATL3Q6DD88 541 aa16.51■□□□□ 0.23
CLCN4-201ENST00000380829 PYCARDQ9ULZ3 195 aa16.51■□□□□ 0.23
CLCN4-201ENST00000380829 CLIC4Q9Y696 253 aa16.51■□□□□ 0.23
CLCN4-201ENST00000380829 DUOX1Q9NRD9 1551 aa16.51■□□□□ 0.23
CLCN4-201ENST00000380829 CYP2D6P10635 497 aa16.51■□□□□ 0.23
CLCN4-201ENST00000380829 ME1P48163 572 aa16.51■□□□□ 0.23
CLCN4-201ENST00000380829 RBM6P78332 1123 aaKnown RBP16.51■□□□□ 0.23
CLCN4-201ENST00000380829 DIXDC1Q155Q3 683 aa16.51■□□□□ 0.23
CLCN4-201ENST00000380829 ZNF654Q8IZM8 581 aa16.51■□□□□ 0.23
CLCN4-201ENST00000380829 WDR66Q8TBY9 1149 aa16.51■□□□□ 0.23
CLCN4-201ENST00000380829 DDX19AQ9NUU7 478 aaKnown RBP16.51■□□□□ 0.23
CLCN4-201ENST00000380829 GGA1Q9UJY5 639 aa16.51■□□□□ 0.23
CLCN4-201ENST00000380829 APBA3O96018 575 aa16.5■□□□□ 0.23
CLCN4-201ENST00000380829 SSRP1Q08945 709 aaKnown RBP16.5■□□□□ 0.23
CLCN4-201ENST00000380829 SEC23AQ15436 765 aa16.5■□□□□ 0.23
CLCN4-201ENST00000380829 MYSM1Q5VVJ2 828 aa16.5■□□□□ 0.23
CLCN4-201ENST00000380829 CCAR1Q8IX12 1150 aaKnown RBP16.5■□□□□ 0.23
CLCN4-201ENST00000380829 GOLPH3LQ9H4A5 285 aa16.5■□□□□ 0.23
CLCN4-201ENST00000380829 CCDC88AQ3V6T2 1871 aa16.5■□□□□ 0.23
CLCN4-201ENST00000380829 MAST2Q6P0Q8 1798 aa16.5■□□□□ 0.23
CLCN4-201ENST00000380829 MYH2Q9UKX2 1941 aa16.5■□□□□ 0.23
CLCN4-201ENST00000380829 GUCY1A2P33402 732 aa16.5■□□□□ 0.23
CLCN4-201ENST00000380829 BRAPQ7Z569 592 aa16.5■□□□□ 0.23
CLCN4-201ENST00000380829 TMTC2Q8N394 836 aa16.5■□□□□ 0.23
CLCN4-201ENST00000380829 ENAHQ8N8S7 591 aaPredicted RBP16.5■□□□□ 0.23
CLCN4-201ENST00000380829 IPO4Q8TEX9 1081 aaKnown RBP16.5■□□□□ 0.23
CLCN4-201ENST00000380829 MTA3Q9BTC8 594 aa16.5■□□□□ 0.23
CLCN4-201ENST00000380829 CLSTN2Q9H4D0 955 aa16.5■□□□□ 0.23
CLCN4-201ENST00000380829 RTEL1Q9NZ71 1219 aa16.5■□□□□ 0.23
CLCN4-201ENST00000380829 CCDC192P0DO97 292 aa16.49■□□□□ 0.23
CLCN4-201ENST00000380829 IFNAR1P17181 557 aa16.49■□□□□ 0.23
CLCN4-201ENST00000380829 ZSCAN10Q96SZ4 725 aaPredicted RBP16.49■□□□□ 0.23
CLCN4-201ENST00000380829 KCNF1Q9H3M0 494 aa16.49■□□□□ 0.23
CLCN4-201ENST00000380829 CD209Q9NNX6 404 aa16.49■□□□□ 0.23
CLCN4-201ENST00000380829 ATP8A2Q9NTI2 1148 aa16.49■□□□□ 0.23
CLCN4-201ENST00000380829 ECM29Q5VYK3 1845 aa16.49■□□□□ 0.23
CLCN4-201ENST00000380829 NID2Q14112 1375 aa16.49■□□□□ 0.23
CLCN4-201ENST00000380829 BBOX1O75936 387 aa16.49■□□□□ 0.23
CLCN4-201ENST00000380829 FMNL1O95466 1100 aaPredicted RBP16.49■□□□□ 0.23
CLCN4-201ENST00000380829 ATP2B4P23634 1241 aa16.49■□□□□ 0.23
CLCN4-201ENST00000380829 COL23A1Q86Y22 540 aaPredicted RBP16.49■□□□□ 0.23
CLCN4-201ENST00000380829 FANCBQ8NB91 859 aa16.49■□□□□ 0.23
CLCN4-201ENST00000380829 POLLQ9UGP5 575 aa16.49■□□□□ 0.23
CLCN4-201ENST00000380829 PCDHA7Q9UN72 937 aa16.49■□□□□ 0.23
CLCN4-201ENST00000380829 USP17L8P0C7I0 530 aa16.48■□□□□ 0.23
CLCN4-201ENST00000380829 HOXA10P31260 410 aaPredicted RBP16.48■□□□□ 0.23
CLCN4-201ENST00000380829 STK38Q15208 465 aa16.48■□□□□ 0.23
CLCN4-201ENST00000380829 C15orf52Q6ZUT6 534 aaKnown RBP16.48■□□□□ 0.23
CLCN4-201ENST00000380829 LINC00301Q8NCQ3 95 aa16.48■□□□□ 0.23
CLCN4-201ENST00000380829 MCM9Q9NXL9 1143 aa16.48■□□□□ 0.23
CLCN4-201ENST00000380829 FGRP09769 529 aa16.48■□□□□ 0.23
CLCN4-201ENST00000380829 CDK11BP21127 795 aaKnown RBP16.48■□□□□ 0.23
CLCN4-201ENST00000380829 GNL2Q13823 731 aaKnown RBP16.48■□□□□ 0.23
CLCN4-201ENST00000380829 TRIM29Q14134 588 aa16.48■□□□□ 0.23
CLCN4-201ENST00000380829 FAM47AQ5JRC9 791 aa16.48■□□□□ 0.23
CLCN4-201ENST00000380829 TAF3Q5VWG9 929 aa16.48■□□□□ 0.23
CLCN4-201ENST00000380829 ZNF772Q68DY9 489 aaPredicted RBP16.48■□□□□ 0.23
CLCN4-201ENST00000380829 SH3RF3Q8TEJ3 882 aaPredicted RBP16.48■□□□□ 0.23
CLCN4-201ENST00000380829 STK36Q9NRP7 1315 aa16.47■□□□□ 0.23
CLCN4-201ENST00000380829 NMT2O60551 498 aa16.47■□□□□ 0.23
CLCN4-201ENST00000380829 TYRO3Q06418 890 aa16.47■□□□□ 0.23
CLCN4-201ENST00000380829 NCBP1Q09161 790 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms