RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 OTUD7BQ6GQQ9 843 aa23.17■■□□□ 1.3
PDLIM5-205ENST00000380180 FBXO18Q8NFZ0 1043 aa23.17■■□□□ 1.3
PDLIM5-205ENST00000380180 SPATA32Q96LK8 384 aa23.17■■□□□ 1.3
PDLIM5-205ENST00000380180 TMX4Q9H1E5 349 aaPredicted RBP23.17■■□□□ 1.3
PDLIM5-205ENST00000380180 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.17■■□□□ 1.3
PDLIM5-205ENST00000380180 MYH6P13533 1939 aa23.17■■□□□ 1.3
PDLIM5-205ENST00000380180 LEO1Q8WVC0 666 aaPredicted RBP23.16■■□□□ 1.3
PDLIM5-205ENST00000380180 PHKBQ93100 1093 aa23.16■■□□□ 1.3
PDLIM5-205ENST00000380180 ZSCAN10Q96SZ4 725 aaPredicted RBP23.16■■□□□ 1.3
PDLIM5-205ENST00000380180 H0YIN7 160 aa23.16■■□□□ 1.3
PDLIM5-205ENST00000380180 SLC3A2P08195 630 aaKnown RBP23.16■■□□□ 1.3
PDLIM5-205ENST00000380180 GJB4Q9NTQ9 266 aa23.16■■□□□ 1.3
PDLIM5-205ENST00000380180 NID2Q14112 1375 aa23.16■■□□□ 1.3
PDLIM5-205ENST00000380180 ORC4O43929 436 aa23.15■■□□□ 1.3
PDLIM5-205ENST00000380180 CFAP45Q9UL16 551 aa23.15■■□□□ 1.3
PDLIM5-205ENST00000380180 GPR75-ASB3A0A0A6YYF3 556 aa23.15■■□□□ 1.3
PDLIM5-205ENST00000380180 IARSP41252 1262 aaKnown RBP23.15■■□□□ 1.3
PDLIM5-205ENST00000380180 BTDP43251 543 aa23.15■■□□□ 1.3
PDLIM5-205ENST00000380180 SLC4A8Q2Y0W8 1093 aa23.15■■□□□ 1.3
PDLIM5-205ENST00000380180 IQCA1Q86XH1 822 aa23.15■■□□□ 1.3
PDLIM5-205ENST00000380180 ZNF654Q8IZM8 581 aa23.15■■□□□ 1.3
PDLIM5-205ENST00000380180 ENAHQ8N8S7 591 aaPredicted RBP23.15■■□□□ 1.3
PDLIM5-205ENST00000380180 MYH1P12882 1939 aa23.14■■□□□ 1.3
PDLIM5-205ENST00000380180 C12orf60Q5U649 245 aa23.14■■□□□ 1.29
PDLIM5-205ENST00000380180 STYK1Q6J9G0 422 aa23.14■■□□□ 1.29
PDLIM5-205ENST00000380180 TGFBRAP1Q8WUH2 860 aa23.14■■□□□ 1.29
PDLIM5-205ENST00000380180 FAM163AQ96GL9 167 aaPredicted RBP23.14■■□□□ 1.29
PDLIM5-205ENST00000380180 AIFM3Q96NN9 605 aa23.14■■□□□ 1.29
PDLIM5-205ENST00000380180 PDE4BQ07343 736 aa23.13■■□□□ 1.29
PDLIM5-205ENST00000380180 RTN1Q16799 776 aa23.13■■□□□ 1.29
PDLIM5-205ENST00000380180 DOK7Q18PE1 504 aa23.13■■□□□ 1.29
PDLIM5-205ENST00000380180 LRSAM1Q6UWE0 723 aa23.13■■□□□ 1.29
PDLIM5-205ENST00000380180 ALG1Q9BT22 464 aa23.13■■□□□ 1.29
PDLIM5-205ENST00000380180 RCAN1P53805 252 aa23.13■■□□□ 1.29
PDLIM5-205ENST00000380180 CERS3Q8IU89 383 aa23.13■■□□□ 1.29
PDLIM5-205ENST00000380180 SLF2Q8IX21 1173 aa23.13■■□□□ 1.29
PDLIM5-205ENST00000380180 FANCBQ8NB91 859 aa23.13■■□□□ 1.29
PDLIM5-205ENST00000380180 NUP133Q8WUM0 1156 aa23.13■■□□□ 1.29
PDLIM5-205ENST00000380180 IFNAR1P17181 557 aa23.12■■□□□ 1.29
PDLIM5-205ENST00000380180 CHRNA5P30532 468 aa23.12■■□□□ 1.29
PDLIM5-205ENST00000380180 FOCADQ5VW36 1801 aa23.12■■□□□ 1.29
PDLIM5-205ENST00000380180 PANK2Q9BZ23 570 aa23.12■■□□□ 1.29
PDLIM5-205ENST00000380180 CEBPZQ03701 1054 aaKnown RBP23.11■■□□□ 1.29
PDLIM5-205ENST00000380180 SSRP1Q08945 709 aaKnown RBP23.11■■□□□ 1.29
PDLIM5-205ENST00000380180 FAM47AQ5JRC9 791 aa23.11■■□□□ 1.29
PDLIM5-205ENST00000380180 IFIT1BQ5T764 474 aaKnown RBP23.11■■□□□ 1.29
PDLIM5-205ENST00000380180 RGS22Q8NE09 1264 aa23.11■■□□□ 1.29
PDLIM5-205ENST00000380180 FBXW7Q969H0 707 aa23.11■■□□□ 1.29
PDLIM5-205ENST00000380180 CCDC183Q5T5S1 534 aa23.11■■□□□ 1.29
PDLIM5-205ENST00000380180 ATL3Q6DD88 541 aa23.11■■□□□ 1.29
PDLIM5-205ENST00000380180 MAPKAPK5Q8IW41 473 aa23.11■■□□□ 1.29
PDLIM5-205ENST00000380180 ZNF396Q96N95 335 aaPredicted RBP23.11■■□□□ 1.29
PDLIM5-205ENST00000380180 SLC26A6Q9BXS9 759 aa23.11■■□□□ 1.29
PDLIM5-205ENST00000380180 PDGFDQ9GZP0 370 aaPredicted RBP23.11■■□□□ 1.29
PDLIM5-205ENST00000380180 GAKO14976 1311 aa23.1■■□□□ 1.29
PDLIM5-205ENST00000380180 STK36Q9NRP7 1315 aa23.1■■□□□ 1.29
PDLIM5-205ENST00000380180 CCDC196A0A1B0GTZ2 297 aa23.1■■□□□ 1.29
PDLIM5-205ENST00000380180 FMNL1O95466 1100 aaPredicted RBP23.1■■□□□ 1.29
PDLIM5-205ENST00000380180 SF3B2Q13435 895 aaKnown RBP23.1■■□□□ 1.29
PDLIM5-205ENST00000380180 DEFB132Q7Z7B7 95 aa23.1■■□□□ 1.29
PDLIM5-205ENST00000380180 USP28Q96RU2 1077 aa23.1■■□□□ 1.29
PDLIM5-205ENST00000380180 EYA3Q99504 573 aa23.1■■□□□ 1.29
PDLIM5-205ENST00000380180 FTOQ9C0B1 505 aaKnown RBP eCLIP23.1■■□□□ 1.29
PDLIM5-205ENST00000380180 GOLGA6L4A6NEF3 574 aa23.09■■□□□ 1.29
PDLIM5-205ENST00000380180 G3V3G9 751 aa23.09■■□□□ 1.29
PDLIM5-205ENST00000380180 UBE2Q2LH0YL09 131 aa23.09■■□□□ 1.29
PDLIM5-205ENST00000380180 PLCG2P16885 1265 aa23.09■■□□□ 1.29
PDLIM5-205ENST00000380180 DCAF8Q5TAQ9 597 aa23.09■■□□□ 1.29
PDLIM5-205ENST00000380180 TEX11Q8IYF3 940 aa23.09■■□□□ 1.29
PDLIM5-205ENST00000380180 DYNLL2Q96FJ2 89 aa23.09■■□□□ 1.29
PDLIM5-205ENST00000380180 PGBD1Q96JS3 809 aa23.09■■□□□ 1.29
PDLIM5-205ENST00000380180 NMT2O60551 498 aa23.09■■□□□ 1.29
PDLIM5-205ENST00000380180 BAG6P46379 1132 aa23.09■■□□□ 1.29
PDLIM5-205ENST00000380180 RHBDL3P58872 404 aa23.09■■□□□ 1.29
PDLIM5-205ENST00000380180 AMOTL1Q8IY63 956 aa23.09■■□□□ 1.29
PDLIM5-205ENST00000380180 CMTR1Q8N1G2 835 aaKnown RBP23.09■■□□□ 1.29
PDLIM5-205ENST00000380180 CERS5Q8N5B7 392 aa23.09■■□□□ 1.29
PDLIM5-205ENST00000380180 RCOR1Q9UKL0 485 aa23.09■■□□□ 1.29
PDLIM5-205ENST00000380180 SUGT1Q9Y2Z0 365 aa23.09■■□□□ 1.29
PDLIM5-205ENST00000380180 POLR3DP05423 398 aaPredicted RBP23.08■■□□□ 1.29
PDLIM5-205ENST00000380180 PLCD1P51178 756 aa23.08■■□□□ 1.29
PDLIM5-205ENST00000380180 KRT40Q6A162 431 aa23.08■■□□□ 1.29
PDLIM5-205ENST00000380180 CATIPQ7Z7H3 387 aa23.08■■□□□ 1.29
PDLIM5-205ENST00000380180 NBPF11Q86T75 865 aa23.08■■□□□ 1.29
PDLIM5-205ENST00000380180 CCDC82Q8N4S0 544 aa23.08■■□□□ 1.29
PDLIM5-205ENST00000380180 ZNF219Q9P2Y4 722 aaPredicted RBP23.08■■□□□ 1.29
PDLIM5-205ENST00000380180 SAP30BPQ9UHR5 308 aaKnown RBP23.08■■□□□ 1.29
PDLIM5-205ENST00000380180 TAOK2Q9UL54 1235 aa23.08■■□□□ 1.29
PDLIM5-205ENST00000380180 DDX60LQ5H9U9 1706 aaKnown RBP23.08■■□□□ 1.28
PDLIM5-205ENST00000380180 TSPY2A6NKD2 308 aa23.08■■□□□ 1.28
PDLIM5-205ENST00000380180 PPP2R5BQ15173 497 aa23.08■■□□□ 1.28
PDLIM5-205ENST00000380180 CRACR2BQ8N4Y2 399 aaPredicted RBP23.08■■□□□ 1.28
PDLIM5-205ENST00000380180 CNKSR1Q969H4 720 aa23.08■■□□□ 1.28
PDLIM5-205ENST00000380180 ROBO3Q96MS0 1386 aa23.07■■□□□ 1.28
PDLIM5-205ENST00000380180 KIF28PB7ZC32 967 aa23.07■■□□□ 1.28
PDLIM5-205ENST00000380180 F8W031 263 aaPredicted RBP23.07■■□□□ 1.28
PDLIM5-205ENST00000380180 KIF23Q02241 960 aaPredicted RBP23.07■■□□□ 1.28
PDLIM5-205ENST00000380180 BRAPQ7Z569 592 aa23.07■■□□□ 1.28
PDLIM5-205ENST00000380180 MXD3Q9BW11 206 aa23.07■■□□□ 1.28
PDLIM5-205ENST00000380180 RBSNQ9H1K0 784 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms