RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 TNKSO95271 1327 aa17.23■□□□□ 0.35
PRNP-201ENST00000379440 A0A1B0GVL5 298 aa17.23■□□□□ 0.35
PRNP-201ENST00000379440 FAM160A1Q05DH4 1040 aa17.23■□□□□ 0.35
PRNP-201ENST00000379440 RTN1Q16799 776 aa17.23■□□□□ 0.35
PRNP-201ENST00000379440 ADALQ6DHV7 355 aa17.23■□□□□ 0.35
PRNP-201ENST00000379440 CBX8Q9HC52 389 aa17.23■□□□□ 0.35
PRNP-201ENST00000379440 SPTLC2O15270 562 aa17.23■□□□□ 0.35
PRNP-201ENST00000379440 FMNL1O95466 1100 aaPredicted RBP17.23■□□□□ 0.35
PRNP-201ENST00000379440 GYS1P13807 737 aa17.23■□□□□ 0.35
PRNP-201ENST00000379440 IFNAR1P17181 557 aa17.23■□□□□ 0.35
PRNP-201ENST00000379440 ANO1Q5XXA6 986 aa17.23■□□□□ 0.35
PRNP-201ENST00000379440 ZNF654Q8IZM8 581 aa17.23■□□□□ 0.35
PRNP-201ENST00000379440 DNAJC25Q9H1X3 360 aa17.23■□□□□ 0.35
PRNP-201ENST00000379440 YEATS4O95619 227 aa17.22■□□□□ 0.35
PRNP-201ENST00000379440 SEC23AQ15436 765 aa17.22■□□□□ 0.35
PRNP-201ENST00000379440 MRPS27Q92552 414 aaKnown RBP17.22■□□□□ 0.35
PRNP-201ENST00000379440 ERCC4Q92889 916 aaPredicted RBP17.22■□□□□ 0.35
PRNP-201ENST00000379440 ZKSCAN5Q9Y2L8 839 aa17.22■□□□□ 0.35
PRNP-201ENST00000379440 MYH13Q9UKX3 1938 aa17.22■□□□□ 0.35
PRNP-201ENST00000379440 PDS5AQ29RF7 1337 aaKnown RBP17.22■□□□□ 0.35
PRNP-201ENST00000379440 GNL2Q13823 731 aaKnown RBP17.22■□□□□ 0.35
PRNP-201ENST00000379440 TMTC2Q8N394 836 aa17.22■□□□□ 0.35
PRNP-201ENST00000379440 FANCBQ8NB91 859 aa17.22■□□□□ 0.35
PRNP-201ENST00000379440 KCNG4Q8TDN1 519 aa17.22■□□□□ 0.35
PRNP-201ENST00000379440 A0A087WWV3 80 aa17.21■□□□□ 0.35
PRNP-201ENST00000379440 KINO60870 393 aaKnown RBP17.21■□□□□ 0.35
PRNP-201ENST00000379440 TRIM37O94972 964 aa17.21■□□□□ 0.35
PRNP-201ENST00000379440 NDUFA8P51970 172 aa17.21■□□□□ 0.35
PRNP-201ENST00000379440 TRIM29Q14134 588 aa17.21■□□□□ 0.35
PRNP-201ENST00000379440 MTA3Q9BTC8 594 aa17.21■□□□□ 0.35
PRNP-201ENST00000379440 DCP1AQ9NPI6 582 aaPredicted RBP17.21■□□□□ 0.35
PRNP-201ENST00000379440 ECM29Q5VYK3 1845 aa17.21■□□□□ 0.35
PRNP-201ENST00000379440 ADRA2BP18089 450 aa17.21■□□□□ 0.35
PRNP-201ENST00000379440 MARCKSP29966 332 aaPredicted RBP17.21■□□□□ 0.35
PRNP-201ENST00000379440 NBPF11Q86T75 865 aa17.21■□□□□ 0.35
PRNP-201ENST00000379440 FMR1NBQ8N0W7 255 aaPredicted RBP17.21■□□□□ 0.35
PRNP-201ENST00000379440 ENAHQ8N8S7 591 aaPredicted RBP17.21■□□□□ 0.35
PRNP-201ENST00000379440 NID2Q14112 1375 aa17.21■□□□□ 0.34
PRNP-201ENST00000379440 STK36Q9NRP7 1315 aa17.2■□□□□ 0.34
PRNP-201ENST00000379440 SERPINB2P05120 415 aa17.2■□□□□ 0.34
PRNP-201ENST00000379440 CYP2D6P10635 497 aa17.2■□□□□ 0.34
PRNP-201ENST00000379440 SLC4A8Q2Y0W8 1093 aa17.2■□□□□ 0.34
PRNP-201ENST00000379440 PPP4R3BQ5MIZ7 849 aa17.2■□□□□ 0.34
PRNP-201ENST00000379440 SECISBP2LQ93073 1101 aaKnown RBP17.2■□□□□ 0.34
PRNP-201ENST00000379440 ZSCAN10Q96SZ4 725 aaPredicted RBP17.2■□□□□ 0.34
PRNP-201ENST00000379440 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.2■□□□□ 0.34
PRNP-201ENST00000379440 KCNJ14Q9UNX9 436 aa17.2■□□□□ 0.34
PRNP-201ENST00000379440 A0A1W2PQ27 194 aa17.2■□□□□ 0.34
PRNP-201ENST00000379440 A0A1W2PQ64 194 aa17.2■□□□□ 0.34
PRNP-201ENST00000379440 A0A1W2PQD8 194 aa17.2■□□□□ 0.34
PRNP-201ENST00000379440 CHRM1P11229 460 aaPredicted RBP17.2■□□□□ 0.34
PRNP-201ENST00000379440 GRIK5Q16478 980 aa17.2■□□□□ 0.34
PRNP-201ENST00000379440 CRACR2BQ8N4Y2 399 aaPredicted RBP17.2■□□□□ 0.34
PRNP-201ENST00000379440 RGS22Q8NE09 1264 aa17.2■□□□□ 0.34
PRNP-201ENST00000379440 RPGRQ92834 1020 aaKnown RBP17.2■□□□□ 0.34
PRNP-201ENST00000379440 CRNKL1Q9BZJ0 848 aaKnown RBP17.2■□□□□ 0.34
PRNP-201ENST00000379440 LEMD3Q9Y2U8 911 aa17.2■□□□□ 0.34
PRNP-201ENST00000379440 MYH2Q9UKX2 1941 aa17.2■□□□□ 0.34
PRNP-201ENST00000379440 WDHD1O75717 1129 aaPredicted RBP17.19■□□□□ 0.34
PRNP-201ENST00000379440 U2AF2P26368 475 aaKnown RBP eCLIP17.19■□□□□ 0.346e-7■■■□□ 15.4
PRNP-201ENST00000379440 ZNF165P49910 485 aa17.19■□□□□ 0.34
PRNP-201ENST00000379440 DZIP1Q86YF9 867 aaKnown RBP17.19■□□□□ 0.34
PRNP-201ENST00000379440 DUOX1Q9NRD9 1551 aa17.19■□□□□ 0.34
PRNP-201ENST00000379440 CTAGE5O15320 804 aa17.19■□□□□ 0.34
PRNP-201ENST00000379440 GPSM2P81274 684 aa17.19■□□□□ 0.34
PRNP-201ENST00000379440 DMTNQ08495 405 aa17.19■□□□□ 0.34
PRNP-201ENST00000379440 AXDND1Q5T1B0 1012 aaPredicted RBP17.19■□□□□ 0.34
PRNP-201ENST00000379440 TRIM22Q8IYM9 498 aa17.19■□□□□ 0.34
PRNP-201ENST00000379440 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.19■□□□□ 0.34
PRNP-201ENST00000379440 XDHP47989 1333 aa17.19■□□□□ 0.34
PRNP-201ENST00000379440 BTBD18B2RXH4 712 aa17.18■□□□□ 0.34
PRNP-201ENST00000379440 FGRP09769 529 aa17.18■□□□□ 0.34
PRNP-201ENST00000379440 SLC39A14Q15043 492 aa17.18■□□□□ 0.34
PRNP-201ENST00000379440 NMT2O60551 498 aa17.18■□□□□ 0.34
PRNP-201ENST00000379440 FAM47AQ5JRC9 791 aa17.18■□□□□ 0.34
PRNP-201ENST00000379440 UBR3Q6ZT12 1888 aa17.18■□□□□ 0.34
PRNP-201ENST00000379440 C11orf57Q6ZUT1 292 aaPredicted RBP17.18■□□□□ 0.34
PRNP-201ENST00000379440 TDRD7Q8NHU6 1098 aaKnown RBP17.18■□□□□ 0.34
PRNP-201ENST00000379440 CCDC196A0A1B0GTZ2 297 aa17.17■□□□□ 0.34
PRNP-201ENST00000379440 VGLL3A8MV65 326 aa17.17■□□□□ 0.34
PRNP-201ENST00000379440 IFIT1BQ5T764 474 aaKnown RBP17.17■□□□□ 0.34
PRNP-201ENST00000379440 KRT27Q7Z3Y8 459 aa17.17■□□□□ 0.34
PRNP-201ENST00000379440 WASF1Q92558 559 aa17.17■□□□□ 0.34
PRNP-201ENST00000379440 ATP8A2Q9NTI2 1148 aa17.17■□□□□ 0.34
PRNP-201ENST00000379440 MMP1P03956 469 aa17.17■□□□□ 0.34
PRNP-201ENST00000379440 LDHBP07195 334 aaKnown RBP17.17■□□□□ 0.34
PRNP-201ENST00000379440 TERF1P54274 439 aa17.17■□□□□ 0.34
PRNP-201ENST00000379440 PTPAQ15257 358 aa17.17■□□□□ 0.34
PRNP-201ENST00000379440 DIXDC1Q155Q3 683 aa17.17■□□□□ 0.34
PRNP-201ENST00000379440 SPTY2D1Q68D10 685 aaPredicted RBP17.17■□□□□ 0.34
PRNP-201ENST00000379440 IQCA1Q86XH1 822 aa17.17■□□□□ 0.34
PRNP-201ENST00000379440 MAP3K14Q99558 947 aa17.17■□□□□ 0.34
PRNP-201ENST00000379440 SDF4Q9BRK5 362 aa17.17■□□□□ 0.34
PRNP-201ENST00000379440 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.17■□□□□ 0.34
PRNP-201ENST00000379440 hCG_1642624A0A1W2PR95 340 aa17.16■□□□□ 0.34
PRNP-201ENST00000379440 DEXIO95424 95 aa17.16■□□□□ 0.34
PRNP-201ENST00000379440 USP17L8P0C7I0 530 aa17.16■□□□□ 0.34
PRNP-201ENST00000379440 ST5P78524 1137 aa17.16■□□□□ 0.34
PRNP-201ENST00000379440 CRY2Q49AN0 593 aa17.16■□□□□ 0.34
PRNP-201ENST00000379440 DIS3L2Q8IYB7 885 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms