RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 TOMM22Q9NS69 142 aa18.69■□□□□ 0.58
CCDC107-204ENST00000378409 TACC3Q9Y6A5 838 aa18.69■□□□□ 0.58
CCDC107-204ENST00000378409 DDTLA6NHG4 134 aaPredicted RBP18.68■□□□□ 0.58
CCDC107-204ENST00000378409 NEK4P51957 841 aa18.68■□□□□ 0.58
CCDC107-204ENST00000378409 TNFAIP1Q13829 316 aa18.68■□□□□ 0.58
CCDC107-204ENST00000378409 RRP12Q5JTH9 1297 aaKnown RBP18.68■□□□□ 0.58
CCDC107-204ENST00000378409 BLOC1S2Q6QNY1 142 aa18.68■□□□□ 0.58
CCDC107-204ENST00000378409 SH3BP5LQ7L8J4 393 aa18.68■□□□□ 0.58
CCDC107-204ENST00000378409 FAM83AQ86UY5 434 aa18.68■□□□□ 0.58
CCDC107-204ENST00000378409 APOBEC3FQ8IUX4 373 aaKnown RBP18.68■□□□□ 0.58
CCDC107-204ENST00000378409 CNNM2Q9H8M5 875 aa18.68■□□□□ 0.58
CCDC107-204ENST00000378409 ZSWIM6Q9HCJ5 1215 aa18.68■□□□□ 0.58
CCDC107-204ENST00000378409 GGA3Q9NZ52 723 aa18.68■□□□□ 0.58
CCDC107-204ENST00000378409 SCAF8Q9UPN6 1271 aaKnown RBP18.68■□□□□ 0.58
CCDC107-204ENST00000378409 CYP46A1Q9Y6A2 500 aa18.68■□□□□ 0.58
CCDC107-204ENST00000378409 ATRNL1Q5VV63 1379 aa18.68■□□□□ 0.58
CCDC107-204ENST00000378409 B4E1Z4 1266 aa18.67■□□□□ 0.58
CCDC107-204ENST00000378409 HMGB1P09429 215 aaKnown RBP18.67■□□□□ 0.58
CCDC107-204ENST00000378409 ANP32AP39687 249 aaKnown RBP18.67■□□□□ 0.58
CCDC107-204ENST00000378409 PDE4BQ07343 736 aa18.67■□□□□ 0.58
CCDC107-204ENST00000378409 COL9A3Q14050 684 aaPredicted RBP18.67■□□□□ 0.58
CCDC107-204ENST00000378409 USP50Q70EL3 339 aaPredicted RBP18.67■□□□□ 0.58
CCDC107-204ENST00000378409 RUFY3Q7L099 469 aa18.67■□□□□ 0.58
CCDC107-204ENST00000378409 KRT23Q9C075 422 aa18.67■□□□□ 0.58
CCDC107-204ENST00000378409 TMEM39BQ9GZU3 492 aa18.67■□□□□ 0.58
CCDC107-204ENST00000378409 PRDM1O75626 825 aa18.66■□□□□ 0.58
CCDC107-204ENST00000378409 PCP11498 1178 aaKnown RBP18.66■□□□□ 0.58
CCDC107-204ENST00000378409 RPS6KB1P23443 525 aa18.66■□□□□ 0.58
CCDC107-204ENST00000378409 RASA3Q14644 834 aa18.66■□□□□ 0.58
CCDC107-204ENST00000378409 C16orf86Q6ZW13 317 aa18.66■□□□□ 0.58
CCDC107-204ENST00000378409 CRACR2BQ8N4Y2 399 aaPredicted RBP18.66■□□□□ 0.58
CCDC107-204ENST00000378409 SLC44A5Q8NCS7 719 aa18.66■□□□□ 0.58
CCDC107-204ENST00000378409 CSRNP1Q96S65 589 aa18.66■□□□□ 0.58
CCDC107-204ENST00000378409 TAF1DQ9H5J8 278 aaPredicted RBP18.66■□□□□ 0.58
CCDC107-204ENST00000378409 PI4KBQ9UBF8 816 aa18.66■□□□□ 0.58
CCDC107-204ENST00000378409 SERPINB13Q9UIV8 391 aa18.66■□□□□ 0.58
CCDC107-204ENST00000378409 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.66■□□□□ 0.58
CCDC107-204ENST00000378409 POTECB2RU33 542 aa18.65■□□□□ 0.58
CCDC107-204ENST00000378409 FGRP09769 529 aa18.65■□□□□ 0.58
CCDC107-204ENST00000378409 CDK8P49336 464 aa18.65■□□□□ 0.58
CCDC107-204ENST00000378409 EAPPQ56P03 285 aaPredicted RBP18.65■□□□□ 0.58
CCDC107-204ENST00000378409 MB21D2Q8IYB1 491 aaPredicted RBP18.65■□□□□ 0.58
CCDC107-204ENST00000378409 TRIM34Q9BYJ4 488 aa18.65■□□□□ 0.58
CCDC107-204ENST00000378409 EHD4Q9H223 541 aa18.65■□□□□ 0.58
CCDC107-204ENST00000378409 MKNK2Q9HBH9 465 aa18.65■□□□□ 0.58
CCDC107-204ENST00000378409 ZNF287Q9HBT7 754 aa18.65■□□□□ 0.58
CCDC107-204ENST00000378409 ORC4O43929 436 aa18.64■□□□□ 0.57
CCDC107-204ENST00000378409 ST18O60284 1047 aa18.64■□□□□ 0.57
CCDC107-204ENST00000378409 RANBP6O60518 1105 aaKnown RBP18.64■□□□□ 0.57
CCDC107-204ENST00000378409 KDM4AO75164 1064 aa18.64■□□□□ 0.57
CCDC107-204ENST00000378409 MCM5P33992 734 aa18.64■□□□□ 0.57
CCDC107-204ENST00000378409 DHX32Q7L7V1 743 aaKnown RBP18.64■□□□□ 0.57
CCDC107-204ENST00000378409 CHST3Q7LGC8 479 aa18.64■□□□□ 0.57
CCDC107-204ENST00000378409 NKX2-3Q8TAU0 364 aa18.64■□□□□ 0.57
CCDC107-204ENST00000378409 ESR2Q92731 530 aa18.64■□□□□ 0.57
CCDC107-204ENST00000378409 TCEANC2Q96MN5 208 aa18.64■□□□□ 0.57
CCDC107-204ENST00000378409 DEFB129Q9H1M3 183 aa18.64■□□□□ 0.57
CCDC107-204ENST00000378409 PDRG1Q9NUG6 133 aa18.64■□□□□ 0.57
CCDC107-204ENST00000378409 PITPNM2Q9BZ72 1349 aa18.64■□□□□ 0.57
CCDC107-204ENST00000378409 ATAD5Q96QE3 1844 aa18.63■□□□□ 0.57
CCDC107-204ENST00000378409 PRC1O43663 620 aa18.63■□□□□ 0.57
CCDC107-204ENST00000378409 GABPAQ06546 454 aa18.63■□□□□ 0.57
CCDC107-204ENST00000378409 CYB5R4Q7L1T6 521 aa18.63■□□□□ 0.57
CCDC107-204ENST00000378409 PNMA8AQ86V59 439 aaPredicted RBP18.63■□□□□ 0.57
CCDC107-204ENST00000378409 CDAN1Q8IWY9 1227 aa18.63■□□□□ 0.57
CCDC107-204ENST00000378409 DCPSQ96C86 337 aaKnown RBP18.63■□□□□ 0.57
CCDC107-204ENST00000378409 RRAGCQ9HB90 399 aa18.63■□□□□ 0.57
CCDC107-204ENST00000378409 SWAP70Q9UH65 585 aa18.63■□□□□ 0.57
CCDC107-204ENST00000378409 FAM196BA6NMK8 535 aa18.62■□□□□ 0.57
CCDC107-204ENST00000378409 SLURP2P0DP57 97 aa18.62■□□□□ 0.57
CCDC107-204ENST00000378409 ANTXR2P58335 489 aa18.62■□□□□ 0.57
CCDC107-204ENST00000378409 FGD1P98174 961 aa18.62■□□□□ 0.57
CCDC107-204ENST00000378409 FOXP4Q8IVH2 680 aaPredicted RBP18.62■□□□□ 0.57
CCDC107-204ENST00000378409 ZNF526Q8TF50 670 aaPredicted RBP18.62■□□□□ 0.57
CCDC107-204ENST00000378409 TTC14Q96N46 770 aa18.62■□□□□ 0.57
CCDC107-204ENST00000378409 LRRC2Q9BYS8 371 aa18.62■□□□□ 0.57
CCDC107-204ENST00000378409 PGAP2Q9UHJ9 254 aa18.62■□□□□ 0.57
CCDC107-204ENST00000378409 GREB1LQ9C091 1923 aaPredicted RBP18.61■□□□□ 0.57
CCDC107-204ENST00000378409 VEGFAP15692 232 aaPredicted RBP18.61■□□□□ 0.57
CCDC107-204ENST00000378409 RASA1P20936 1047 aa18.61■□□□□ 0.57
CCDC107-204ENST00000378409 SHMT1P34896 483 aa18.61■□□□□ 0.57
CCDC107-204ENST00000378409 EXOSC10Q01780 885 aaKnown RBP18.61■□□□□ 0.57
CCDC107-204ENST00000378409 FAM47AQ5JRC9 791 aa18.61■□□□□ 0.57
CCDC107-204ENST00000378409 ZNF444Q8N0Y2 327 aaPredicted RBP18.61■□□□□ 0.57
CCDC107-204ENST00000378409 ZC3H15Q8WU90 426 aaKnown RBP18.61■□□□□ 0.57
CCDC107-204ENST00000378409 TEPSINQ96N21 525 aa18.61■□□□□ 0.57
CCDC107-204ENST00000378409 DNAJC18Q9H819 358 aa18.61■□□□□ 0.57
CCDC107-204ENST00000378409 ZSWIM5Q9P217 1185 aa18.61■□□□□ 0.57
CCDC107-204ENST00000378409 MYH4Q9Y623 1939 aa18.61■□□□□ 0.57
CCDC107-204ENST00000378409 WDR19Q8NEZ3 1342 aa18.6■□□□□ 0.57
CCDC107-204ENST00000378409 TSPY2A6NKD2 308 aa18.6■□□□□ 0.57
CCDC107-204ENST00000378409 CD2BP2O95400 341 aaKnown RBP18.6■□□□□ 0.57
CCDC107-204ENST00000378409 Q6ZUG5 572 aa18.6■□□□□ 0.57
CCDC107-204ENST00000378409 NOL8Q76FK4 1167 aaKnown RBP18.6■□□□□ 0.57
CCDC107-204ENST00000378409 METTL16Q86W50 562 aaKnown RBP18.6■□□□□ 0.57
CCDC107-204ENST00000378409 SULF1Q8IWU6 871 aa18.6■□□□□ 0.57
CCDC107-204ENST00000378409 IL27Q8NEV9 243 aa18.6■□□□□ 0.57
CCDC107-204ENST00000378409 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.6■□□□□ 0.57
CCDC107-204ENST00000378409 HERC5Q9UII4 1024 aaKnown RBP18.6■□□□□ 0.57
CCDC107-204ENST00000378409 TAOK2Q9UL54 1235 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms