RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 APOA5Q6Q788 366 aa14.93□□□□□ -0.02
NPHP4-203ENST00000378169 CAMSAP1Q5T5Y3 1602 aa14.93□□□□□ -0.02
NPHP4-203ENST00000378169 ZNF827Q17R98 1081 aa14.93□□□□□ -0.02
NPHP4-203ENST00000378169 SUSD4Q5VX71 490 aa14.93□□□□□ -0.02
NPHP4-203ENST00000378169 LRRC27Q9C0I9 530 aa14.93□□□□□ -0.02
NPHP4-203ENST00000378169 CLIC4Q9Y696 253 aa14.93□□□□□ -0.02
NPHP4-203ENST00000378169 CCDC66A2RUB6 948 aa14.93□□□□□ -0.02
NPHP4-203ENST00000378169 NBPF26B4DH59 902 aa14.93□□□□□ -0.02
NPHP4-203ENST00000378169 H0YHG0 523 aa14.93□□□□□ -0.02
NPHP4-203ENST00000378169 CCNT1O60563 726 aaKnown RBP14.93□□□□□ -0.02
NPHP4-203ENST00000378169 CCDC175P0C221 793 aa14.93□□□□□ -0.02
NPHP4-203ENST00000378169 NBPF14Q5TI25 921 aa14.93□□□□□ -0.02
NPHP4-203ENST00000378169 NBPF10Q6P3W6 841 aaKnown RBP14.93□□□□□ -0.02
NPHP4-203ENST00000378169 NOSTRINQ8IVI9 506 aa14.93□□□□□ -0.02
NPHP4-203ENST00000378169 NBPF15Q8N660 670 aa14.93□□□□□ -0.02
NPHP4-203ENST00000378169 CRB1P82279 1406 aa14.92□□□□□ -0.02
NPHP4-203ENST00000378169 ARID4AP29374 1257 aaPredicted RBP14.92□□□□□ -0.02
NPHP4-203ENST00000378169 DYNLL1P63167 89 aaKnown RBP14.92□□□□□ -0.02
NPHP4-203ENST00000378169 ERFEQ4G0M1 354 aa14.92□□□□□ -0.02
NPHP4-203ENST00000378169 KIAA1468Q9P260 1216 aa14.92□□□□□ -0.02
NPHP4-203ENST00000378169 POLR1AO95602 1720 aaPredicted RBP14.92□□□□□ -0.02
NPHP4-203ENST00000378169 GOLGA8HP0CJ92 632 aa14.92□□□□□ -0.02
NPHP4-203ENST00000378169 ADD2P35612 726 aa14.92□□□□□ -0.02
NPHP4-203ENST00000378169 WWC2Q6AWC2 1192 aa14.92□□□□□ -0.02
NPHP4-203ENST00000378169 KIF2CQ99661 725 aa14.92□□□□□ -0.02
NPHP4-203ENST00000378169 GBP3Q9H0R5 595 aa14.92□□□□□ -0.02
NPHP4-203ENST00000378169 ATG3Q9NT62 314 aa14.92□□□□□ -0.02
NPHP4-203ENST00000378169 MACROD2A1Z1Q3 448 aa14.92□□□□□ -0.02
NPHP4-203ENST00000378169 PRPF4BQ13523 1007 aaKnown RBP14.92□□□□□ -0.02
NPHP4-203ENST00000378169 FAM196AQ6ZSG2 479 aa14.92□□□□□ -0.02
NPHP4-203ENST00000378169 GPIHBP1Q8IV16 184 aa14.92□□□□□ -0.02
NPHP4-203ENST00000378169 SERTAD1Q9UHV2 236 aa14.92□□□□□ -0.02
NPHP4-203ENST00000378169 CTNND2Q9UQB3 1225 aa14.92□□□□□ -0.02
NPHP4-203ENST00000378169 MRPL12P52815 198 aaKnown RBP14.91□□□□□ -0.02
NPHP4-203ENST00000378169 LRMPQ12912 555 aa14.91□□□□□ -0.02
NPHP4-203ENST00000378169 CNKSR2Q8WXI2 1034 aa14.91□□□□□ -0.02
NPHP4-203ENST00000378169 AIFM3Q96NN9 605 aa14.91□□□□□ -0.02
NPHP4-203ENST00000378169 ZSCAN10Q96SZ4 725 aaPredicted RBP14.91□□□□□ -0.02
NPHP4-203ENST00000378169 TSPYL1Q9H0U9 437 aa14.91□□□□□ -0.02
NPHP4-203ENST00000378169 GJB4Q9NTQ9 266 aa14.91□□□□□ -0.02
NPHP4-203ENST00000378169 SRP68Q9UHB9 627 aaKnown RBP14.91□□□□□ -0.02
NPHP4-203ENST00000378169 GUCA1BQ9UMX6 200 aa14.91□□□□□ -0.02
NPHP4-203ENST00000378169 NDUFA8P51970 172 aa14.91□□□□□ -0.02
NPHP4-203ENST00000378169 RASGRF1Q13972 1273 aa14.91□□□□□ -0.02
NPHP4-203ENST00000378169 POSTNQ15063 836 aa14.91□□□□□ -0.02
NPHP4-203ENST00000378169 BLZF1Q9H2G9 400 aa14.91□□□□□ -0.02
NPHP4-203ENST00000378169 PKD2L1Q9P0L9 805 aa14.91□□□□□ -0.02
NPHP4-203ENST00000378169 ADAMTS13Q76LX8 1427 aa14.91□□□□□ -0.02
NPHP4-203ENST00000378169 FSD2A1L4K1 749 aa14.91□□□□□ -0.02
NPHP4-203ENST00000378169 CYLC1P35663 651 aaPredicted RBP14.91□□□□□ -0.02
NPHP4-203ENST00000378169 TAX1BP1Q86VP1 789 aa14.91□□□□□ -0.02
NPHP4-203ENST00000378169 SCLT1Q96NL6 688 aa14.91□□□□□ -0.02
NPHP4-203ENST00000378169 TTF2Q9UNY4 1162 aaKnown RBP14.91□□□□□ -0.02
NPHP4-203ENST00000378169 MYO3AQ8NEV4 1616 aa14.91□□□□□ -0.02
NPHP4-203ENST00000378169 CYP2D7A0A087X1C5 515 aa14.9□□□□□ -0.02
NPHP4-203ENST00000378169 CHGBP05060 677 aa14.9□□□□□ -0.02
NPHP4-203ENST00000378169 MCAMP43121 646 aa14.9□□□□□ -0.02
NPHP4-203ENST00000378169 CETN1Q12798 172 aa14.9□□□□□ -0.02
NPHP4-203ENST00000378169 UBE4AQ14139 1066 aa14.9□□□□□ -0.02
NPHP4-203ENST00000378169 PNMA1Q8ND90 353 aa14.9□□□□□ -0.02
NPHP4-203ENST00000378169 BAG1Q99933 345 aaPredicted RBP14.9□□□□□ -0.02
NPHP4-203ENST00000378169 PIH1D3Q9NQM4 214 aaKnown RBP14.9□□□□□ -0.02
NPHP4-203ENST00000378169 CWC15Q9P013 229 aaKnown RBP14.9□□□□□ -0.02
NPHP4-203ENST00000378169 ZBTB21Q9ULJ3 1066 aa14.9□□□□□ -0.02
NPHP4-203ENST00000378169 CDC42BPGQ6DT37 1551 aa14.9□□□□□ -0.02
NPHP4-203ENST00000378169 ZNF804BA4D1E1 1349 aa14.9□□□□□ -0.02
NPHP4-203ENST00000378169 ZMYM6O95789 1325 aa14.9□□□□□ -0.02
NPHP4-203ENST00000378169 SLU7O95391 586 aaKnown RBP14.9□□□□□ -0.02
NPHP4-203ENST00000378169 APBA3O96018 575 aa14.9□□□□□ -0.02
NPHP4-203ENST00000378169 SCNN1DP51172 638 aa14.9□□□□□ -0.02
NPHP4-203ENST00000378169 SETQ01105 290 aaPredicted RBP14.9□□□□□ -0.02
NPHP4-203ENST00000378169 PDE4DQ08499 809 aa14.9□□□□□ -0.02
NPHP4-203ENST00000378169 LCORLQ8N3X6 602 aa14.9□□□□□ -0.02
NPHP4-203ENST00000378169 JDP2Q8WYK2 163 aa14.9□□□□□ -0.02
NPHP4-203ENST00000378169 ALS2CR12Q96Q35 445 aa14.9□□□□□ -0.02
NPHP4-203ENST00000378169 LUC7L2Q9Y383 392 aaKnown RBP14.9□□□□□ -0.02
NPHP4-203ENST00000378169 SLC1A4P43007 532 aa14.9□□□□□ -0.02
NPHP4-203ENST00000378169 IGSF22Q8N9C0 903 aa14.9□□□□□ -0.02
NPHP4-203ENST00000378169 CCDC42Q96M95 316 aa14.9□□□□□ -0.02
NPHP4-203ENST00000378169 XPO4Q9C0E2 1151 aaKnown RBP14.9□□□□□ -0.02
NPHP4-203ENST00000378169 NLRP12P59046 1061 aa14.9□□□□□ -0.02
NPHP4-203ENST00000378169 SP4Q02446 784 aa14.9□□□□□ -0.02
NPHP4-203ENST00000378169 HLTFQ14527 1009 aaKnown RBP eCLIP14.9□□□□□ -0.02
NPHP4-203ENST00000378169 PPP2R5BQ15173 497 aa14.9□□□□□ -0.02
NPHP4-203ENST00000378169 DOK7Q18PE1 504 aa14.9□□□□□ -0.02
NPHP4-203ENST00000378169 RAD51AP2Q09MP3 1159 aa14.89□□□□□ -0.03
NPHP4-203ENST00000378169 GPKOWQ92917 476 aaPredicted RBP eCLIP14.89□□□□□ -0.03
NPHP4-203ENST00000378169 LAMC1P11047 1609 aa14.89□□□□□ -0.03
NPHP4-203ENST00000378169 PLS1Q14651 629 aa14.89□□□□□ -0.03
NPHP4-203ENST00000378169 KIAA0825Q8IV33 1275 aa14.89□□□□□ -0.03
NPHP4-203ENST00000378169 ZSWIM5Q9P217 1185 aa14.89□□□□□ -0.03
NPHP4-203ENST00000378169 OVOS2A0A0J9YW53 1432 aa14.89□□□□□ -0.03
NPHP4-203ENST00000378169 OVOS2Q6IE36 1432 aa14.89□□□□□ -0.03
NPHP4-203ENST00000378169 ARPP21Q9UBL0 812 aaPredicted RBP14.89□□□□□ -0.03
NPHP4-203ENST00000378169 RDXP35241 583 aaKnown RBP14.88□□□□□ -0.03
NPHP4-203ENST00000378169 TBC1D8BQ0IIM8 1120 aa14.88□□□□□ -0.03
NPHP4-203ENST00000378169 NONOQ15233 471 aaKnown RBP eCLIP14.88□□□□□ -0.034e-8■■■■□ 26.3
NPHP4-203ENST00000378169 ZNF569Q5MCW4 686 aa14.88□□□□□ -0.03
NPHP4-203ENST00000378169 STXBP4Q6ZWJ1 553 aa14.88□□□□□ -0.03
NPHP4-203ENST00000378169 MLKLQ8NB16 471 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms