RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 UPF2Q9HAU5 1272 aaKnown RBP15.66■□□□□ 0.1
TIMP1-202ENST00000377017 SWAP70Q9UH65 585 aa15.66■□□□□ 0.1
TIMP1-202ENST00000377017 TRPM7Q96QT4 1865 aa15.65■□□□□ 0.1
TIMP1-202ENST00000377017 ROBO3Q96MS0 1386 aa15.65■□□□□ 0.1
TIMP1-202ENST00000377017 MYH8P13535 1937 aa15.65■□□□□ 0.1
TIMP1-202ENST00000377017 PPP1R12BO60237 982 aaPredicted RBP15.65■□□□□ 0.1
TIMP1-202ENST00000377017 TBC1D12O60347 775 aa15.65■□□□□ 0.1
TIMP1-202ENST00000377017 CYP2D6P10635 497 aa15.65■□□□□ 0.1
TIMP1-202ENST00000377017 PLCD1P51178 756 aa15.65■□□□□ 0.1
TIMP1-202ENST00000377017 PDE4BQ07343 736 aa15.65■□□□□ 0.1
TIMP1-202ENST00000377017 PRAMEF18Q5VWM3 479 aa15.65■□□□□ 0.1
TIMP1-202ENST00000377017 RNF41Q9H4P4 317 aaPredicted RBP15.65■□□□□ 0.1
TIMP1-202ENST00000377017 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.65■□□□□ 0.1
TIMP1-202ENST00000377017 ANAPC4Q9UJX5 808 aa15.65■□□□□ 0.1
TIMP1-202ENST00000377017 SIPA1L1O43166 1804 aa15.64■□□□□ 0.09
TIMP1-202ENST00000377017 CYP2D7A0A087X1C5 515 aa15.64■□□□□ 0.09
TIMP1-202ENST00000377017 PCP11498 1178 aaKnown RBP15.64■□□□□ 0.09
TIMP1-202ENST00000377017 METTL16Q86W50 562 aaKnown RBP15.64■□□□□ 0.09
TIMP1-202ENST00000377017 CDAN1Q8IWY9 1227 aa15.64■□□□□ 0.09
TIMP1-202ENST00000377017 ZNF341Q9BYN7 854 aa15.64■□□□□ 0.09
TIMP1-202ENST00000377017 TRAF5O00463 557 aa15.63■□□□□ 0.09
TIMP1-202ENST00000377017 ITGBL1O95965 494 aaPredicted RBP15.63■□□□□ 0.09
TIMP1-202ENST00000377017 ZKSCAN1P17029 563 aaPredicted RBP15.63■□□□□ 0.09
TIMP1-202ENST00000377017 HAND2P61296 217 aa15.63■□□□□ 0.09
TIMP1-202ENST00000377017 C16orf86Q6ZW13 317 aa15.63■□□□□ 0.09
TIMP1-202ENST00000377017 USP26Q9BXU7 913 aa15.63■□□□□ 0.09
TIMP1-202ENST00000377017 ZNF408Q9H9D4 720 aa15.63■□□□□ 0.09
TIMP1-202ENST00000377017 MKNK2Q9HBH9 465 aa15.63■□□□□ 0.09
TIMP1-202ENST00000377017 PAPPA2Q9BXP8 1791 aa15.62■□□□□ 0.09
TIMP1-202ENST00000377017 CELF2O95319 508 aaKnown RBP15.62■□□□□ 0.09
TIMP1-202ENST00000377017 IREB2P48200 963 aaKnown RBP15.62■□□□□ 0.09
TIMP1-202ENST00000377017 NT5C2P49902 561 aa15.62■□□□□ 0.09
TIMP1-202ENST00000377017 FKBP1BP68106 108 aa15.62■□□□□ 0.09
TIMP1-202ENST00000377017 MAP3K10Q02779 954 aa15.62■□□□□ 0.09
TIMP1-202ENST00000377017 GABPAQ06546 454 aa15.62■□□□□ 0.09
TIMP1-202ENST00000377017 TTLL12Q14166 644 aaPredicted RBP15.62■□□□□ 0.09
TIMP1-202ENST00000377017 NECTIN1Q15223 517 aa15.62■□□□□ 0.09
TIMP1-202ENST00000377017 AKNAD1Q5T1N1 836 aa15.62■□□□□ 0.09
TIMP1-202ENST00000377017 CREB3L3Q68CJ9 461 aa15.62■□□□□ 0.09
TIMP1-202ENST00000377017 MFSD6Q6ZSS7 791 aa15.62■□□□□ 0.09
TIMP1-202ENST00000377017 MIGA2Q7L4E1 593 aa15.62■□□□□ 0.09
TIMP1-202ENST00000377017 ARMC9Q7Z3E5 817 aa15.62■□□□□ 0.09
TIMP1-202ENST00000377017 BACH2Q9BYV9 841 aa15.62■□□□□ 0.09
TIMP1-202ENST00000377017 SSC5DA1L4H1 1573 aa15.62■□□□□ 0.09
TIMP1-202ENST00000377017 SLC27A2O14975 620 aa15.61■□□□□ 0.09
TIMP1-202ENST00000377017 CYP21A2P08686 494 aa15.61■□□□□ 0.09
TIMP1-202ENST00000377017 HSPA4P34932 840 aa15.61■□□□□ 0.09
TIMP1-202ENST00000377017 CDK8P49336 464 aa15.61■□□□□ 0.09
TIMP1-202ENST00000377017 CTDSPL2Q05D32 466 aa15.61■□□□□ 0.09
TIMP1-202ENST00000377017 TRDNQ13061 729 aa15.61■□□□□ 0.09
TIMP1-202ENST00000377017 C2orf69Q8N8R5 385 aa15.61■□□□□ 0.09
TIMP1-202ENST00000377017 STAG1Q8WVM7 1258 aa15.61■□□□□ 0.09
TIMP1-202ENST00000377017 DYNLL2Q96FJ2 89 aa15.61■□□□□ 0.09
TIMP1-202ENST00000377017 CNNM2Q9H8M5 875 aa15.61■□□□□ 0.09
TIMP1-202ENST00000377017 TOMM22Q9NS69 142 aa15.61■□□□□ 0.09
TIMP1-202ENST00000377017 PASKQ96RG2 1323 aa15.61■□□□□ 0.09
TIMP1-202ENST00000377017 SEC24BO95487 1268 aa15.6■□□□□ 0.09
TIMP1-202ENST00000377017 KRT32Q14532 448 aa15.6■□□□□ 0.09
TIMP1-202ENST00000377017 CERKLQ49MI3 558 aaPredicted RBP15.6■□□□□ 0.09
TIMP1-202ENST00000377017 DLK2Q6UY11 383 aa15.6■□□□□ 0.09
TIMP1-202ENST00000377017 ZNF444Q8N0Y2 327 aaPredicted RBP15.6■□□□□ 0.09
TIMP1-202ENST00000377017 STK11IPQ8N1F8 1099 aa15.6■□□□□ 0.09
TIMP1-202ENST00000377017 CCDC17Q96LX7 622 aa15.6■□□□□ 0.09
TIMP1-202ENST00000377017 DNAJC18Q9H819 358 aa15.6■□□□□ 0.09
TIMP1-202ENST00000377017 GBA2Q9HCG7 927 aaPredicted RBP15.6■□□□□ 0.09
TIMP1-202ENST00000377017 ANGEL1Q9UNK9 670 aaKnown RBP15.6■□□□□ 0.09
TIMP1-202ENST00000377017 UNCXA6NJT0 531 aa15.59■□□□□ 0.09
TIMP1-202ENST00000377017 FAM196BA6NMK8 535 aa15.59■□□□□ 0.09
TIMP1-202ENST00000377017 ORC4O43929 436 aa15.59■□□□□ 0.09
TIMP1-202ENST00000377017 FGRP09769 529 aa15.59■□□□□ 0.09
TIMP1-202ENST00000377017 SHMT1P34896 483 aa15.59■□□□□ 0.09
TIMP1-202ENST00000377017 PRKG1Q13976 671 aa15.59■□□□□ 0.09
TIMP1-202ENST00000377017 TATDN1Q6P1N9 297 aa15.59■□□□□ 0.09
TIMP1-202ENST00000377017 RALYLQ86SE5 291 aaKnown RBP15.59■□□□□ 0.09
TIMP1-202ENST00000377017 TBC1D10CQ8IV04 446 aa15.59■□□□□ 0.09
TIMP1-202ENST00000377017 SLC44A5Q8NCS7 719 aa15.59■□□□□ 0.09
TIMP1-202ENST00000377017 KLRG1Q96E93 195 aa15.59■□□□□ 0.09
TIMP1-202ENST00000377017 WRNIP1Q96S55 665 aa15.59■□□□□ 0.09
TIMP1-202ENST00000377017 KRT23Q9C075 422 aa15.59■□□□□ 0.09
TIMP1-202ENST00000377017 CABP5Q9NP86 173 aa15.59■□□□□ 0.09
TIMP1-202ENST00000377017 GINM1Q9NU53 330 aa15.59■□□□□ 0.09
TIMP1-202ENST00000377017 CTNND1O60716 968 aaKnown RBP15.58■□□□□ 0.08
TIMP1-202ENST00000377017 USP2O75604 605 aaPredicted RBP15.58■□□□□ 0.08
TIMP1-202ENST00000377017 EVX2Q03828 476 aa15.58■□□□□ 0.08
TIMP1-202ENST00000377017 MAP3K11Q16584 847 aa15.58■□□□□ 0.08
TIMP1-202ENST00000377017 TSGA10IPQ3SY00 556 aa15.58■□□□□ 0.08
TIMP1-202ENST00000377017 RRP12Q5JTH9 1297 aaKnown RBP15.58■□□□□ 0.08
TIMP1-202ENST00000377017 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.58■□□□□ 0.08
TIMP1-202ENST00000377017 NCOA7Q8NI08 942 aa15.58■□□□□ 0.08
TIMP1-202ENST00000377017 ESR2Q92731 530 aa15.58■□□□□ 0.08
TIMP1-202ENST00000377017 KCNB2Q92953 911 aa15.58■□□□□ 0.08
TIMP1-202ENST00000377017 NBPF3Q9H094 633 aa15.58■□□□□ 0.08
TIMP1-202ENST00000377017 ZNF112Q9UJU3 913 aa15.58■□□□□ 0.08
TIMP1-202ENST00000377017 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.58■□□□□ 0.08
TIMP1-202ENST00000377017 CSADQ9Y600 493 aa15.58■□□□□ 0.08
TIMP1-202ENST00000377017 DOCK1Q14185 1865 aa15.58■□□□□ 0.08
TIMP1-202ENST00000377017 ATAD5Q96QE3 1844 aa15.57■□□□□ 0.08
TIMP1-202ENST00000377017 OTOFQ9HC10 1997 aa15.57■□□□□ 0.08
TIMP1-202ENST00000377017 TSPY2A6NKD2 308 aa15.57■□□□□ 0.08
TIMP1-202ENST00000377017 E7EWF7 191 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms