RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 TBC1D2Q9BYX2 928 aa26.72■■□□□ 1.87
SRM-201ENST00000376957 ZFYVE28Q9HCC9 887 aa26.72■■□□□ 1.87
SRM-201ENST00000376957 SUPT16HQ9Y5B9 1047 aaKnown RBP26.72■■□□□ 1.87
SRM-201ENST00000376957 CXCL11O14625 94 aa26.71■■□□□ 1.87
SRM-201ENST00000376957 FKTNO75072 461 aa26.71■■□□□ 1.87
SRM-201ENST00000376957 DGKZQ13574 1117 aa26.71■■□□□ 1.87
SRM-201ENST00000376957 BRI3BPQ8WY22 251 aa26.71■■□□□ 1.87
SRM-201ENST00000376957 PALD1Q9ULE6 856 aa26.71■■□□□ 1.87
SRM-201ENST00000376957 ZHX2Q9Y6X8 837 aa26.71■■□□□ 1.87
SRM-201ENST00000376957 PTPRAP18433 802 aa26.7■■□□□ 1.86
SRM-201ENST00000376957 TAF1CQ15572 869 aaPredicted RBP26.7■■□□□ 1.86
SRM-201ENST00000376957 ANKRD45Q5TZF3 282 aa26.7■■□□□ 1.86
SRM-201ENST00000376957 ZNF296Q8WUU4 475 aaPredicted RBP26.7■■□□□ 1.86
SRM-201ENST00000376957 DDRGK1Q96HY6 314 aa26.7■■□□□ 1.86
SRM-201ENST00000376957 PTPN18Q99952 460 aa26.7■■□□□ 1.86
SRM-201ENST00000376957 FOCADQ5VW36 1801 aa26.69■■□□□ 1.86
SRM-201ENST00000376957 ADD2P35612 726 aa26.69■■□□□ 1.86
SRM-201ENST00000376957 UBE3CQ15386 1083 aa26.69■■□□□ 1.86
SRM-201ENST00000376957 FASTKD5Q7L8L6 764 aaKnown RBP26.69■■□□□ 1.86
SRM-201ENST00000376957 CTU1Q7Z7A3 348 aaKnown RBP26.69■■□□□ 1.86
SRM-201ENST00000376957 EDC3Q96F86 508 aaKnown RBP26.69■■□□□ 1.86
SRM-201ENST00000376957 SAP30BPQ9UHR5 308 aaKnown RBP26.69■■□□□ 1.86
SRM-201ENST00000376957 KCNH4Q9UQ05 1017 aa26.69■■□□□ 1.86
SRM-201ENST00000376957 ARHGEF6Q15052 776 aa26.68■■□□□ 1.86
SRM-201ENST00000376957 PKN2Q16513 984 aaKnown RBP26.68■■□□□ 1.86
SRM-201ENST00000376957 GLRX3O76003 335 aaKnown RBP26.67■■□□□ 1.86
SRM-201ENST00000376957 CAP2P40123 477 aa26.67■■□□□ 1.86
SRM-201ENST00000376957 CRHR2Q13324 411 aa26.67■■□□□ 1.86
SRM-201ENST00000376957 AMOTL1Q8IY63 956 aa26.67■■□□□ 1.86
SRM-201ENST00000376957 RIOK1Q9BRS2 568 aaKnown RBP26.67■■□□□ 1.86
SRM-201ENST00000376957 AS3MTQ9HBK9 375 aa26.67■■□□□ 1.86
SRM-201ENST00000376957 GINM1Q9NU53 330 aa26.67■■□□□ 1.86
SRM-201ENST00000376957 DOCK1Q14185 1865 aa26.66■■□□□ 1.86
SRM-201ENST00000376957 CDK5RAP2Q96SN8 1893 aa26.66■■□□□ 1.86
SRM-201ENST00000376957 POLR3DP05423 398 aaPredicted RBP26.66■■□□□ 1.86
SRM-201ENST00000376957 ZFYP08048 801 aaPredicted RBP26.66■■□□□ 1.86
SRM-201ENST00000376957 ANKRD23Q86SG2 305 aa26.66■■□□□ 1.86
SRM-201ENST00000376957 ERO1AQ96HE7 468 aa26.66■■□□□ 1.86
SRM-201ENST00000376957 TCRBV5S4A2TA0A5A2 114 aa26.65■■□□□ 1.86
SRM-201ENST00000376957 FAM196BA6NMK8 535 aa26.65■■□□□ 1.86
SRM-201ENST00000376957 BTBD19C9JJ37 291 aa26.65■■□□□ 1.86
SRM-201ENST00000376957 ASNSP08243 561 aa26.65■■□□□ 1.86
SRM-201ENST00000376957 MX1P20591 662 aa26.65■■□□□ 1.86
SRM-201ENST00000376957 FAM43AQ8N2R8 423 aa26.65■■□□□ 1.86
SRM-201ENST00000376957 MCOLN1Q9GZU1 580 aa26.65■■□□□ 1.86
SRM-201ENST00000376957 SERPINB13Q9UIV8 391 aa26.65■■□□□ 1.86
SRM-201ENST00000376957 AFG3L2Q9Y4W6 797 aa26.65■■□□□ 1.86
SRM-201ENST00000376957 USP17L5A8MUK1 530 aa26.64■■□□□ 1.86
SRM-201ENST00000376957 METTL16Q86W50 562 aaKnown RBP26.64■■□□□ 1.86
SRM-201ENST00000376957 KBTBD3Q8NAB2 608 aa26.64■■□□□ 1.86
SRM-201ENST00000376957 ABHD8Q96I13 439 aa26.64■■□□□ 1.86
SRM-201ENST00000376957 EHD4Q9H223 541 aa26.64■■□□□ 1.86
SRM-201ENST00000376957 ATP8A2Q9NTI2 1148 aa26.64■■□□□ 1.86
SRM-201ENST00000376957 MYH1P12882 1939 aa26.64■■□□□ 1.86
SRM-201ENST00000376957 SP3Q02447 781 aa26.63■■□□□ 1.85
SRM-201ENST00000376957 EXOC6Q8TAG9 804 aa26.63■■□□□ 1.85
SRM-201ENST00000376957 MCM9Q9NXL9 1143 aa26.63■■□□□ 1.85
SRM-201ENST00000376957 TAOK2Q9UL54 1235 aa26.63■■□□□ 1.85
SRM-201ENST00000376957 PDHXO00330 501 aa26.62■■□□□ 1.85
SRM-201ENST00000376957 CAPN15O75808 1086 aa26.62■■□□□ 1.85
SRM-201ENST00000376957 MYH7P12883 1935 aa26.61■■□□□ 1.85
SRM-201ENST00000376957 A0A0G2JLL6 359 aaPredicted RBP26.61■■□□□ 1.85
SRM-201ENST00000376957 TRIM75PA6NK02 468 aa26.61■■□□□ 1.85
SRM-201ENST00000376957 MBD4O95243 580 aa26.61■■□□□ 1.85
SRM-201ENST00000376957 KIF22Q14807 665 aa26.61■■□□□ 1.85
SRM-201ENST00000376957 GADL1Q6ZQY3 521 aa26.61■■□□□ 1.85
SRM-201ENST00000376957 PRRT2Q7Z6L0 340 aaPredicted RBP26.61■■□□□ 1.85
SRM-201ENST00000376957 LCORLQ8N3X6 602 aa26.61■■□□□ 1.85
SRM-201ENST00000376957 ZNF280CQ8ND82 737 aa26.61■■□□□ 1.85
SRM-201ENST00000376957 PARK7Q99497 189 aaKnown RBP26.61■■□□□ 1.85
SRM-201ENST00000376957 R3HDMLQ9H3Y0 253 aa26.61■■□□□ 1.85
SRM-201ENST00000376957 ARMT1Q9H993 441 aa26.61■■□□□ 1.85
SRM-201ENST00000376957 TLR2O60603 784 aa26.6■■□□□ 1.85
SRM-201ENST00000376957 SLURP2P0DP57 97 aa26.6■■□□□ 1.85
SRM-201ENST00000376957 SLC4A8Q2Y0W8 1093 aa26.6■■□□□ 1.85
SRM-201ENST00000376957 TSHZ3Q63HK5 1081 aa26.6■■□□□ 1.85
SRM-201ENST00000376957 CABP5Q9NP86 173 aa26.59■■□□□ 1.85
SRM-201ENST00000376957 DCP1AQ9NPI6 582 aaPredicted RBP26.59■■□□□ 1.85
SRM-201ENST00000376957 SLC45A1Q9Y2W3 748 aa26.59■■□□□ 1.85
SRM-201ENST00000376957 RNF113AO15541 343 aaKnown RBP26.58■■□□□ 1.85
SRM-201ENST00000376957 SPP2Q13103 211 aa26.58■■□□□ 1.85
SRM-201ENST00000376957 PABPC4Q13310 644 aaKnown RBP eCLIP26.58■■□□□ 1.856e-7■□□□□ 9.1
SRM-201ENST00000376957 SDR42E1Q8WUS8 393 aa26.58■■□□□ 1.85
SRM-201ENST00000376957 APPBP2Q92624 585 aa26.58■■□□□ 1.85
SRM-201ENST00000376957 SLC4A4Q9Y6R1 1079 aa26.58■■□□□ 1.85
SRM-201ENST00000376957 CERKLQ49MI3 558 aaPredicted RBP26.57■■□□□ 1.84
SRM-201ENST00000376957 PROCA1Q8NCQ7 364 aaPredicted RBP26.57■■□□□ 1.84
SRM-201ENST00000376957 FSD1Q9BTV5 496 aa26.57■■□□□ 1.84
SRM-201ENST00000376957 PNMA3Q9UL41 463 aa26.57■■□□□ 1.84
SRM-201ENST00000376957 ATAD5Q96QE3 1844 aa26.57■■□□□ 1.84
SRM-201ENST00000376957 GNAT2P19087 354 aa26.56■■□□□ 1.84
SRM-201ENST00000376957 TATDN1Q6P1N9 297 aa26.56■■□□□ 1.84
SRM-201ENST00000376957 SMC5Q8IY18 1101 aa26.56■■□□□ 1.84
SRM-201ENST00000376957 PI4K2BQ8TCG2 481 aa26.56■■□□□ 1.84
SRM-201ENST00000376957 WDR18Q9BV38 432 aa26.56■■□□□ 1.84
SRM-201ENST00000376957 DNAJC18Q9H819 358 aa26.56■■□□□ 1.84
SRM-201ENST00000376957 TMOD4Q9NZQ9 345 aa26.56■■□□□ 1.84
SRM-201ENST00000376957 SWAP70Q9UH65 585 aa26.56■■□□□ 1.84
SRM-201ENST00000376957 NAV1Q8NEY1 1877 aa26.55■■□□□ 1.84
SRM-201ENST00000376957 CCDC85CA6NKD9 419 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms